RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 DLL4Q9NR61 685 aa2.81□□□□□ -1.96
CKS1BP2-201ENST00000497342 PLSCR4Q9NRQ2 329 aa2.81□□□□□ -1.96
CKS1BP2-201ENST00000497342 KCND1Q9NSA2 647 aa2.81□□□□□ -1.96
CKS1BP2-201ENST00000497342 POLR3BQ9NW08 1133 aaPredicted RBP2.81□□□□□ -1.96
CKS1BP2-201ENST00000497342 UCKL1Q9NWZ5 548 aa2.81□□□□□ -1.96
CKS1BP2-201ENST00000497342 RGL1Q9NZL6 768 aa2.81□□□□□ -1.96
CKS1BP2-201ENST00000497342 IGSF9Q9P2J2 1179 aa2.81□□□□□ -1.96
CKS1BP2-201ENST00000497342 STOML1Q9UBI4 398 aa2.81□□□□□ -1.96
CKS1BP2-201ENST00000497342 ABCF2Q9UG63 623 aa2.81□□□□□ -1.96
CKS1BP2-201ENST00000497342 NARFQ9UHQ1 456 aa2.81□□□□□ -1.96
CKS1BP2-201ENST00000497342 HERC5Q9UII4 1024 aaKnown RBP2.81□□□□□ -1.96
CKS1BP2-201ENST00000497342 FBXO10Q9UK96 956 aa2.81□□□□□ -1.96
CKS1BP2-201ENST00000497342 MAGED2Q9UNF1 606 aaPredicted RBP2.81□□□□□ -1.96
CKS1BP2-201ENST00000497342 COG5Q9UP83 839 aa2.81□□□□□ -1.96
CKS1BP2-201ENST00000497342 DTNAQ9Y4J8 743 aa2.81□□□□□ -1.96
CKS1BP2-201ENST00000497342 PCDHA13Q9Y5I0 950 aa2.81□□□□□ -1.96
CKS1BP2-201ENST00000497342 CGNL1Q0VF96 1302 aa2.81□□□□□ -1.96
CKS1BP2-201ENST00000497342 COL4A3Q01955 1670 aa2.81□□□□□ -1.96
CKS1BP2-201ENST00000497342 LRRC37A2A6NM11 1700 aa2.81□□□□□ -1.96
CKS1BP2-201ENST00000497342 ARFGEF2Q9Y6D5 1785 aa2.81□□□□□ -1.96
CKS1BP2-201ENST00000497342 ITGB4P16144 1822 aa2.81□□□□□ -1.96
CKS1BP2-201ENST00000497342 DMXL2Q8TDJ6 3036 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 PCDH11XQ9BZA7 1347 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 PCDH11YQ9BZA8 1340 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 PRR19A6NJB7 356 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 A6NLC8 198 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 H3BUI4 141 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 TAF4O00268 1085 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 N4BP3O15049 544 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 TEX33O43247 280 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 CCP110O43303 1012 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 WIPF1O43516 503 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 USO1O60763 962 aaKnown RBP2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 USP2O75604 605 aaPredicted RBP2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 FSBPO95073 299 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 NTSR2O95665 410 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 TBX18O95935 607 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 IGLV1-40P01703 118 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 H2AFB1P0C5Y9 115 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 H2AFB2P0C5Z0 115 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 GAAP10253 952 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 KITP10721 976 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 NPPBP16860 134 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 PRKCAP17252 672 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 TGM1P22735 817 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 MCCP23508 829 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 ECHS1P30084 290 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 HOXD12P35452 270 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 CRKLP46109 303 aaKnown RBP2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 PAPOLAP51003 745 aaKnown RBP2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 GALK1P51570 392 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 ATXN1P54253 815 aaKnown RBP2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 WNT3P56703 355 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 RPS16P62249 146 aaKnown RBP2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 IL13RA1P78552 427 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 ROR1Q01973 937 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 NUCB1Q02818 461 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 DMWDQ09019 674 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 SP140Q13342 867 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 TAF12Q16514 161 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 MAPKAPK3Q16644 382 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 SLC5A9Q2M3M2 681 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 PRICKLE4Q2TBC4 344 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 ALDH1L2Q3SY69 923 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 TBC1D10BQ4KMP7 808 aaPredicted RBP2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 FLYWCH1Q4VC44 716 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 KLHDC7AQ5VTJ3 777 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 INTS5Q6P9B9 1019 aaKnown RBP2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 RINLQ6ZS11 566 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 CEP128Q6ZU80 1094 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 ZNF572Q7Z3I7 529 aaPredicted RBP2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 ZDHHC13Q8IUH4 622 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 PLXDC1Q8IUK5 500 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 ZGPATQ8N5A5 531 aaKnown RBP2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 CCDC33Q8N5R6 958 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 MSL3Q8N5Y2 521 aaKnown RBP2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 DCBLD1Q8N8Z6 715 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 GLIS1Q8NBF1 620 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 RAET1EQ8TD07 263 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 CREB3L4Q8TEY5 395 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 ZNF480Q8WV37 535 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 ALPK1Q96QP1 1244 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 FSD1Q9BTV5 496 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 SENP6Q9GZR1 1112 aaPredicted RBP2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 ENKD1Q9H0I2 346 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 RSPH9Q9H1X1 276 aaPredicted RBP2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 CHST8Q9H2A9 424 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 C11orf49Q9H6J7 331 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 PCDH18Q9HCL0 1135 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 A1CFQ9NQ94 594 aaKnown RBP2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 G6PC2Q9NQR9 355 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 C19orf73Q9NVV2 129 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 TMOD3Q9NYL9 352 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 KIF17Q9P2E2 1029 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 SRRDQ9UH36 339 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 NOL7Q9UMY1 257 aaKnown RBP2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 MAN2B2Q9Y2E5 1009 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 PCDHA3Q9Y5H8 950 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 SLC4A7Q9Y6M7 1214 aa2.8□□□□□ -1.96
CKS1BP2-201ENST00000497342 ZNF831Q5JPB2 1677 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms