RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 BLOC1S6Q9UL45 172 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 USP18Q9UMW8 372 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 CLCA2Q9UQC9 943 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 HDAC5Q9UQL6 1122 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 TMEM5Q9Y2B1 443 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 DERAQ9Y315 318 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 U3KQE9 123 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 UBR1Q8IWV7 1749 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 NWD2Q9ULI1 1742 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 UGGT2Q9NYU1 1516 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 GPATCH8Q9UKJ3 1502 aaKnown RBP2.1□□□□□ -2.07
UBR4-217ENST00000497018 IRS2Q9Y4H2 1338 aa2.1□□□□□ -2.07
UBR4-217ENST00000497018 PREX2Q70Z35 1606 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 FADS2P1A8MWK0 482 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 GOLGA6L6A8MZA4 724 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 F8W735 103 aaPredicted RBP2.09□□□□□ -2.07
UBR4-217ENST00000497018 H0Y858 1186 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 AP3D1O14617 1153 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 N4BP3O15049 544 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 VILLO15195 856 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 TP73O15350 636 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 IPO8O15397 1037 aaKnown RBP2.09□□□□□ -2.07
UBR4-217ENST00000497018 MTSS1O43312 755 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 TNFSF14O43557 240 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 DNPH1O43598 174 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 NRP2O60462 931 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 TSPAN3O60637 253 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 C22orf31O95567 290 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 PLATP00750 562 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 TFRCP02786 760 aaKnown RBP2.09□□□□□ -2.07
UBR4-217ENST00000497018 FUCA1P04066 466 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 CD1AP06126 327 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 ANXA6P08133 673 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 GLI1P08151 1106 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 NFICP08651 508 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 THEGLP0DJG4 465 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 ALADP13716 330 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 FOSL1P15407 271 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 FAHP16930 419 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 BTF3P20290 206 aaKnown RBP2.09□□□□□ -2.07
UBR4-217ENST00000497018 ATP5F1P24539 256 aaPredicted RBP2.09□□□□□ -2.07
UBR4-217ENST00000497018 KLRK1P26718 216 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 ACVR2AP27037 513 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 PCSK1P29120 753 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 ECHS1P30084 290 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 ABCD1P33897 745 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 GRK5P34947 590 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 SREBF1P36956 1147 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 THPOP40225 353 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 PIK3CGP48736 1102 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 SLC11A2P49281 568 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 AARSP49588 968 aaKnown RBP eCLIP2.09□□□□□ -2.07
UBR4-217ENST00000497018 MCM2P49736 904 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 CDK7P50613 346 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 PDE6CP51160 858 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 SLC12A2P55011 1212 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 WNT3AP56704 352 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 CORO7P57737 925 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 YBEYP58557 167 aaPredicted RBP2.09□□□□□ -2.07
UBR4-217ENST00000497018 PSMC1P62191 440 aaKnown RBP2.09□□□□□ -2.07
UBR4-217ENST00000497018 YBX1P67809 324 aaKnown RBP2.09□□□□□ -2.07
UBR4-217ENST00000497018 MRPS5P82675 430 aaKnown RBP2.09□□□□□ -2.07
UBR4-217ENST00000497018 UBXN1Q04323 297 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 NSUN2Q08J23 767 aaKnown RBP eCLIP2.09□□□□□ -2.07
UBR4-217ENST00000497018 MGAT5Q09328 741 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 C17orf67Q0P5P2 114 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 AP1B1Q10567 949 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 DBPQ10586 325 aaPredicted RBP2.09□□□□□ -2.07
UBR4-217ENST00000497018 SLC14A1Q13336 389 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 CTBP1Q13363 440 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 MAMLD1Q13495 774 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 RAB32Q13637 225 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 NFIXQ14938 502 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 ANKRD1Q15327 319 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 E2F5Q15329 346 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 SEC23BQ15437 767 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 NKPD1Q17RQ9 610 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 TMEM266Q2M3C6 531 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 ZNF674Q2M3X9 581 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 BTBD16Q32M84 506 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 SGO2Q562F6 1265 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.09□□□□□ -2.07
UBR4-217ENST00000497018 CC2D1BQ5T0F9 858 aaKnown RBP2.09□□□□□ -2.07
UBR4-217ENST00000497018 NAA35Q5VZE5 725 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 KANK2Q63ZY3 851 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 MRNIPQ6NTE8 343 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 TAF2Q6P1X5 1199 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 SLC2A7Q6PXP3 512 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 PAOXQ6QHF9 649 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 LRSAM1Q6UWE0 723 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 GADL1Q6ZQY3 521 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 PPP1R3FQ6ZSY5 799 aaPredicted RBP2.09□□□□□ -2.07
UBR4-217ENST00000497018 USP51Q70EK9 711 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 RRAGAQ7L523 313 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 RAB11FIP2Q7L804 512 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 PIWIL3Q7Z3Z3 882 aaKnown RBP2.09□□□□□ -2.07
UBR4-217ENST00000497018 BMP8AQ7Z5Y6 402 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 SLC9B2Q86UD5 537 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 FAM129CQ86XR2 697 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 IRF2BP1Q8IU81 584 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms