RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 OPTNQ96CV9 577 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 ZSWIM3Q96MP5 696 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 MNTQ99583 582 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 SDF4Q9BRK5 362 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 NAA15Q9BXJ9 866 aaKnown RBP3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 NUF2Q9BZD4 464 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 KIAA1683Q9H0B3 1180 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 NT5C3AQ9H0P0 336 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 LMAN2LQ9H0V9 348 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 CNTD2Q9H8S5 307 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 TRPV4Q9HBA0 871 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 TNFRSF12AQ9NP84 129 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 CCDC177Q9NQR7 707 aaPredicted RBP3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 IARS2Q9NSE4 1012 aaKnown RBP3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 VPS18Q9P253 973 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 EXOC6BQ9Y2D4 811 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 ZNF536O15090 1300 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 C16orf96A6NNT2 1141 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 GSG1L2A8MUP6 293 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 CAPN14A8MX76 684 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 C22orf46C9J442 243 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 F8W810 466 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 PSMD9O00233 223 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 NOP56O00567 594 aaKnown RBP3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 ADCY3O60266 1144 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 DKC1O60832 514 aaKnown RBP eCLIP3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 TACC1O75410 805 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 URI1O94763 535 aaPredicted RBP3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 LARGE1O95461 756 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 EYA4O95677 639 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 HSPA4LO95757 839 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 ENO2P09104 434 aaPredicted RBP3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 DBHP09172 617 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 CTRB1P17538 263 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 TFEBP19484 476 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 ACAT1P24752 427 aaKnown RBP3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 CFPP27918 469 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 KRT9P35527 623 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 IFNAR2P48551 515 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 GNAQP50148 359 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 MTTPP55157 894 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 GFRA1P56159 465 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 MAP3K7CLP57077 242 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 VBP1P61758 197 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 TGFB2P61812 414 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 MRPS5P82675 430 aaKnown RBP3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 COG7P83436 770 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 CUL2Q13617 745 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 CYLC2Q14093 348 aaPredicted RBP3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 GALEQ14376 348 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 SQLEQ14534 574 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 MXD4Q14582 209 aaPredicted RBP3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 NTRK3Q16288 839 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 MAPKAPK3Q16644 382 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 ABCB5Q2M3G0 1257 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 ERCC6LQ2NKX8 1250 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 MMEL1Q495T6 779 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 PLEKHO1Q53GL0 409 aaPredicted RBP3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 DCAF17Q5H9S7 520 aaPredicted RBP3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 CTRB2Q6GPI1 263 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 RHOUQ7L0Q8 258 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 EPM2AIP1Q7L775 607 aaPredicted RBP3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 GALNTL5Q7Z4T8 443 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 CD302Q8IX05 232 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 CADM3Q8N126 398 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 LRRC71Q8N4P6 559 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 SCAIQ8N9R8 606 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 XXYLT1Q8NBI6 393 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 LILRB4Q8NHJ6 448 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 CAGE1Q8TC20 777 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 AGR3Q8TD06 166 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 DENND1AQ8TEH3 1009 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 DDI1Q8WTU0 396 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 UCMAQ8WVF2 138 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 IFT81Q8WYA0 676 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 IRGQQ8WZA9 623 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 FERMT2Q96AC1 680 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 VPS39Q96JC1 886 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 ZC3H10Q96K80 434 aaKnown RBP3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 FAM20AQ96MK3 541 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 RUNDC3BQ96NL0 473 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 NUDCD1Q96RS6 583 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 RMDN3Q96TC7 470 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 DDX50Q9BQ39 737 aaKnown RBP3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 YIPF3Q9GZM5 350 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 NDEL1Q9GZM8 345 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 ADAM7Q9H2U9 754 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 LIN28AQ9H9Z2 209 aaKnown RBP3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 PREBQ9HCU5 417 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 EHD3Q9NZN3 535 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 TBC1D14Q9P2M4 693 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 MBD1Q9UIS9 605 aaPredicted RBP3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 TELO2Q9Y4R8 837 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 PCDHB6Q9Y5E3 794 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 SH3TC1Q8TE82 1336 aa3.28□□□□□ -1.88
SNRNP48-202ENST00000496946 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 OR14I1A6ND48 311 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 EYA2O00167 538 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms