RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, human

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-210	ENST00000496840	MYCL	P12524	364 aa	Predicted RBP	7.28	□□□□□ -1.24
TARDBP-210	ENST00000496840	SSBP2	P81877	361 aa	Predicted RBP	7.28	□□□□□ -1.24
TARDBP-210	ENST00000496840	GFOD2	Q3B7J2	385 aa		7.28	□□□□□ -1.24
TARDBP-210	ENST00000496840	PTCHD3	Q3KNS1	767 aa		7.28	□□□□□ -1.24
TARDBP-210	ENST00000496840	KIRREL2	Q6UWL6	708 aa		7.28	□□□□□ -1.24
TARDBP-210	ENST00000496840	ZNF66	Q6ZN08	573 aa		7.28	□□□□□ -1.24
TARDBP-210	ENST00000496840	C1QL2	Q7Z5L3	287 aa		7.28	□□□□□ -1.24
TARDBP-210	ENST00000496840	APIP	Q96GX9	242 aa		7.28	□□□□□ -1.24
TARDBP-210	ENST00000496840	SNX18	Q96RF0	628 aa		7.28	□□□□□ -1.24
TARDBP-210	ENST00000496840	MACROD1	Q9BQ69	325 aa		7.28	□□□□□ -1.24
TARDBP-210	ENST00000496840	DHX36	Q9H2U1	1008 aa	Known RBP	7.28	□□□□□ -1.24
TARDBP-210	ENST00000496840	PRRT4	C9JH25	899 aa		7.27	□□□□□ -1.25
TARDBP-210	ENST00000496840	SMIM22	K7EJ46	135 aa		7.27	□□□□□ -1.25
TARDBP-210	ENST00000496840	GOLIM4	O00461	696 aa		7.27	□□□□□ -1.25
TARDBP-210	ENST00000496840	TPP1	O14773	563 aa		7.27	□□□□□ -1.25
TARDBP-210	ENST00000496840	ADAMTS3	O15072	1205 aa		7.27	□□□□□ -1.25
TARDBP-210	ENST00000496840	MYF5	P13349	255 aa		7.27	□□□□□ -1.25
TARDBP-210	ENST00000496840	PRKAR1B	P31321	381 aa		7.27	□□□□□ -1.25
TARDBP-210	ENST00000496840	FAM193A	P78312	1265 aa		7.27	□□□□□ -1.25
TARDBP-210	ENST00000496840	E2F1	Q01094	437 aa		7.27	□□□□□ -1.25
TARDBP-210	ENST00000496840	FMO1	Q01740	532 aa		7.27	□□□□□ -1.25
TARDBP-210	ENST00000496840	SRSF7	Q16629	238 aa	Known RBP eCLIP	7.27	□□□□□ -1.25	2e-10	■■■□□ 18.4
TARDBP-210	ENST00000496840	DARS2	Q6PI48	645 aa	Known RBP	7.27	□□□□□ -1.25
TARDBP-210	ENST00000496840	RAB11FIP4	Q86YS3	637 aa		7.27	□□□□□ -1.25
TARDBP-210	ENST00000496840	TERB1	Q8NA31	727 aa		7.27	□□□□□ -1.25
TARDBP-210	ENST00000496840	FAM156A	Q8NDB6	213 aa		7.27	□□□□□ -1.25
TARDBP-210	ENST00000496840	PRR25	Q96S07	402 aa		7.27	□□□□□ -1.25
TARDBP-210	ENST00000496840	ZNF70	Q9UC06	446 aa	Predicted RBP	7.27	□□□□□ -1.25
TARDBP-210	ENST00000496840	SETD1B	Q9UPS6	1966 aa	Known RBP	7.27	□□□□□ -1.25
TARDBP-210	ENST00000496840	ZNF804B	A4D1E1	1349 aa		7.27	□□□□□ -1.25
TARDBP-210	ENST00000496840	VSTM5	A8MXK1	200 aa		7.26	□□□□□ -1.25
TARDBP-210	ENST00000496840	PSMD9	O00233	223 aa		7.26	□□□□□ -1.25
TARDBP-210	ENST00000496840	VNN1	O95497	513 aa		7.26	□□□□□ -1.25
TARDBP-210	ENST00000496840	EPHA3	P29320	983 aa		7.26	□□□□□ -1.25
TARDBP-210	ENST00000496840	GK	P32189	559 aa		7.26	□□□□□ -1.25
TARDBP-210	ENST00000496840	GRM3	Q14832	879 aa		7.26	□□□□□ -1.25
TARDBP-210	ENST00000496840	L1TD1	Q5T7N2	865 aa	Known RBP	7.26	□□□□□ -1.25
TARDBP-210	ENST00000496840	CCDC149	Q6ZUS6	474 aa		7.26	□□□□□ -1.25
TARDBP-210	ENST00000496840	SIRT6	Q8N6T7	355 aa		7.26	□□□□□ -1.25
TARDBP-210	ENST00000496840	DNAJB14	Q8TBM8	379 aa		7.26	□□□□□ -1.25
TARDBP-210	ENST00000496840	MSLNL	Q96KJ4	702 aa		7.26	□□□□□ -1.25
TARDBP-210	ENST00000496840	COL20A1	Q9P218	1284 aa		7.26	□□□□□ -1.25
TARDBP-210	ENST00000496840	OGDHL	Q9ULD0	1010 aa		7.26	□□□□□ -1.25
TARDBP-210	ENST00000496840	DRG1	Q9Y295	367 aa	Known RBP	7.26	□□□□□ -1.25
TARDBP-210	ENST00000496840	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	7.26	□□□□□ -1.25
TARDBP-210	ENST00000496840	CD3EAP	O15446	510 aa	Known RBP	7.25	□□□□□ -1.25
TARDBP-210	ENST00000496840	MGEA5	O60502	916 aa		7.25	□□□□□ -1.25
TARDBP-210	ENST00000496840	TUBB4A	P04350	444 aa		7.25	□□□□□ -1.25
TARDBP-210	ENST00000496840	EPHB2	P29323	1055 aa		7.25	□□□□□ -1.25
TARDBP-210	ENST00000496840	TIAL1	Q01085	375 aa	Known RBP eCLIP	7.25	□□□□□ -1.25	2e-6	■■□□□ 13.8
TARDBP-210	ENST00000496840	NPY5R	Q15761	445 aa		7.25	□□□□□ -1.25
TARDBP-210	ENST00000496840	KIAA0753	Q2KHM9	967 aa		7.25	□□□□□ -1.25
TARDBP-210	ENST00000496840	C3orf38	Q5JPI3	329 aa		7.25	□□□□□ -1.25
TARDBP-210	ENST00000496840	NEK8	Q86SG6	692 aa		7.25	□□□□□ -1.25
TARDBP-210	ENST00000496840	CHSY1	Q86X52	802 aa		7.25	□□□□□ -1.25
TARDBP-210	ENST00000496840	SFTPA1	Q8IWL2	248 aa		7.25	□□□□□ -1.25
TARDBP-210	ENST00000496840	SMG7	Q92540	1137 aa	Known RBP	7.25	□□□□□ -1.25
TARDBP-210	ENST00000496840	ASB2	Q96Q27	587 aa		7.25	□□□□□ -1.25
TARDBP-210	ENST00000496840	VN1R3	Q9BXE9	311 aa		7.25	□□□□□ -1.25
TARDBP-210	ENST00000496840	BHMT2	Q9H2M3	363 aa		7.25	□□□□□ -1.25
TARDBP-210	ENST00000496840	TRIM36	Q9NQ86	728 aa		7.25	□□□□□ -1.25
TARDBP-210	ENST00000496840	PRDM11	Q9NQV5	511 aa		7.25	□□□□□ -1.25
TARDBP-210	ENST00000496840	AMFR	Q9UKV5	643 aa		7.25	□□□□□ -1.25
TARDBP-210	ENST00000496840	TBC1D30	Q9Y2I9	924 aa		7.25	□□□□□ -1.25
TARDBP-210	ENST00000496840	FER1L4	A9Z1Z3	1794 aa		7.24	□□□□□ -1.25
TARDBP-210	ENST00000496840	POC1B-GALNT4	F8VUJ3	575 aa		7.24	□□□□□ -1.25
TARDBP-210	ENST00000496840	AP4M1	O00189	453 aa		7.24	□□□□□ -1.25
TARDBP-210	ENST00000496840	PPP6C	O00743	305 aa		7.24	□□□□□ -1.25
TARDBP-210	ENST00000496840	RRP9	O43818	475 aa	Known RBP	7.24	□□□□□ -1.25
TARDBP-210	ENST00000496840	SRGAP2	O75044	1071 aa		7.24	□□□□□ -1.25
TARDBP-210	ENST00000496840	PMPCB	O75439	489 aa		7.24	□□□□□ -1.25
TARDBP-210	ENST00000496840	RASSF9	O75901	435 aa		7.24	□□□□□ -1.25
TARDBP-210	ENST00000496840	PDE8B	O95263	885 aa		7.24	□□□□□ -1.25
TARDBP-210	ENST00000496840	CHRM5	P08912	532 aa	Predicted RBP	7.24	□□□□□ -1.25
TARDBP-210	ENST00000496840	PRR35	P0CG20	571 aa		7.24	□□□□□ -1.25
TARDBP-210	ENST00000496840	ZKSCAN1	P17029	563 aa	Predicted RBP	7.24	□□□□□ -1.25
TARDBP-210	ENST00000496840	UQCRC1	P31930	480 aa		7.24	□□□□□ -1.25
TARDBP-210	ENST00000496840	SUMO2	P61956	95 aa	Known RBP	7.24	□□□□□ -1.25
TARDBP-210	ENST00000496840	RPS16	P62249	146 aa	Known RBP	7.24	□□□□□ -1.25
TARDBP-210	ENST00000496840	ARHGEF7	Q14155	803 aa		7.24	□□□□□ -1.25
TARDBP-210	ENST00000496840	RNASE12	Q5GAN4	147 aa	Known RBP	7.24	□□□□□ -1.25
TARDBP-210	ENST00000496840	CACHD1	Q5VU97	1274 aa		7.24	□□□□□ -1.25
TARDBP-210	ENST00000496840	DPY19L3	Q6ZPD9	716 aa		7.24	□□□□□ -1.25
TARDBP-210	ENST00000496840	CATSPERG	Q6ZRH7	1159 aa		7.24	□□□□□ -1.25
TARDBP-210	ENST00000496840	GALNT4	Q8N4A0	578 aa		7.24	□□□□□ -1.25
TARDBP-210	ENST00000496840	TSR2	Q969E8	191 aa	Known RBP	7.24	□□□□□ -1.25
TARDBP-210	ENST00000496840	RITA1	Q96K30	269 aa		7.24	□□□□□ -1.25
TARDBP-210	ENST00000496840	SLC29A3	Q9BZD2	475 aa		7.24	□□□□□ -1.25
TARDBP-210	ENST00000496840	CIPC	Q9C0C6	399 aa		7.24	□□□□□ -1.25
TARDBP-210	ENST00000496840	ZNF287	Q9HBT7	754 aa		7.24	□□□□□ -1.25
TARDBP-210	ENST00000496840	OBP2A	Q9NY56	170 aa		7.24	□□□□□ -1.25
TARDBP-210	ENST00000496840	USP22	Q9UPT9	525 aa		7.24	□□□□□ -1.25
TARDBP-210	ENST00000496840		H7C4K7	107 aa		7.23	□□□□□ -1.25
TARDBP-210	ENST00000496840	RASAL1	O95294	804 aa		7.23	□□□□□ -1.25
TARDBP-210	ENST00000496840	FGA	P02671	866 aa		7.23	□□□□□ -1.25
TARDBP-210	ENST00000496840	TXN	P10599	105 aa	Known RBP	7.23	□□□□□ -1.25
TARDBP-210	ENST00000496840	RPL17	P18621	184 aa	Known RBP	7.23	□□□□□ -1.25
TARDBP-210	ENST00000496840	FPR3	P25089	353 aa		7.23	□□□□□ -1.25
TARDBP-210	ENST00000496840	PEX2	P28328	305 aa		7.23	□□□□□ -1.25
TARDBP-210	ENST00000496840	PTDSS1	P48651	473 aa	Known RBP	7.23	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms