RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 USP15Q9Y4E8 981 aaPredicted RBP11.59□□□□□ -0.55
CMSS1-208ENST00000496116 SNX9Q9Y5X1 595 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 SRCAPQ6ZRS2 3230 aa11.59□□□□□ -0.55
CMSS1-208ENST00000496116 FOXO6A8MYZ6 492 aa11.58□□□□□ -0.56
CMSS1-208ENST00000496116 DNM1LO00429 736 aa11.58□□□□□ -0.56
CMSS1-208ENST00000496116 PRPF4O43172 522 aaKnown RBP eCLIP11.58□□□□□ -0.56
CMSS1-208ENST00000496116 ITGBL1O95965 494 aaPredicted RBP11.58□□□□□ -0.56
CMSS1-208ENST00000496116 GSTA1P08263 222 aa11.58□□□□□ -0.56
CMSS1-208ENST00000496116 GCAP28676 217 aa11.58□□□□□ -0.56
CMSS1-208ENST00000496116 SLC18A1P54219 525 aa11.58□□□□□ -0.56
CMSS1-208ENST00000496116 GEMIN4P57678 1058 aaKnown RBP11.58□□□□□ -0.56
CMSS1-208ENST00000496116 ROR1Q01973 937 aa11.58□□□□□ -0.56
CMSS1-208ENST00000496116 ACVR2BQ13705 512 aa11.58□□□□□ -0.56
CMSS1-208ENST00000496116 MPP2Q14168 576 aa11.58□□□□□ -0.56
CMSS1-208ENST00000496116 GRB14Q14449 540 aa11.58□□□□□ -0.56
CMSS1-208ENST00000496116 KRT81Q14533 505 aa11.58□□□□□ -0.56
CMSS1-208ENST00000496116 PDK2Q15119 407 aa11.58□□□□□ -0.56
CMSS1-208ENST00000496116 TAF5Q15542 800 aa11.58□□□□□ -0.56
CMSS1-208ENST00000496116 KIZQ2M2Z5 673 aa11.58□□□□□ -0.56
CMSS1-208ENST00000496116 BOLA3Q53S33 107 aa11.58□□□□□ -0.56
CMSS1-208ENST00000496116 NOTUMQ6P988 496 aa11.58□□□□□ -0.56
CMSS1-208ENST00000496116 CAPN12Q6ZSI9 719 aa11.58□□□□□ -0.56
CMSS1-208ENST00000496116 CATSPER4Q7RTX7 472 aa11.58□□□□□ -0.56
CMSS1-208ENST00000496116 TRPM8Q7Z2W7 1104 aa11.58□□□□□ -0.56
CMSS1-208ENST00000496116 UNC45BQ8IWX7 931 aa11.58□□□□□ -0.56
CMSS1-208ENST00000496116 C12orf29Q8N999 325 aa11.58□□□□□ -0.56
CMSS1-208ENST00000496116 MS4A4AQ96JQ5 239 aa11.58□□□□□ -0.56
CMSS1-208ENST00000496116 TINF2Q9BSI4 451 aa11.58□□□□□ -0.56
CMSS1-208ENST00000496116 SYT17Q9BSW7 474 aa11.58□□□□□ -0.56
CMSS1-208ENST00000496116 SNTG2Q9NY99 539 aa11.58□□□□□ -0.56
CMSS1-208ENST00000496116 GINS2Q9Y248 185 aa11.58□□□□□ -0.56
CMSS1-208ENST00000496116 SCN4AP35499 1836 aa11.58□□□□□ -0.56
CMSS1-208ENST00000496116 PIK3R2O00459 728 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 ATP2C2O75185 946 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 CYP3A5P20815 502 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 SDC4P31431 198 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 BASP1P80723 227 aaKnown RBP11.57□□□□□ -0.56
CMSS1-208ENST00000496116 ADCY1Q08828 1119 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 NOMO1Q15155 1222 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 CDO1Q16878 200 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 KLHL38Q2WGJ6 581 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 PPP1R26Q5T8A7 1209 aaPredicted RBP11.57□□□□□ -0.56
CMSS1-208ENST00000496116 DARS2Q6PI48 645 aaKnown RBP11.57□□□□□ -0.56
CMSS1-208ENST00000496116 UNC93AQ86WB7 457 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 ZDHHC17Q8IUH5 632 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 PALM2Q8IXS6 379 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 LRRC52Q8N7C0 313 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 FAM71DQ8N9W8 422 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 GRAMD1AQ96CP6 724 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 SNX27Q96L92 541 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 PEBP4Q96S96 227 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 TRIM6Q9C030 488 aaPredicted RBP11.57□□□□□ -0.56
CMSS1-208ENST00000496116 TRABDQ9H4I3 376 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 SETD4Q9NVD3 440 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 SLC5A4Q9NY91 659 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 XPO7Q9UIA9 1087 aaKnown RBP11.57□□□□□ -0.56
CMSS1-208ENST00000496116 NRCAMQ92823 1304 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 TRIP11Q15643 1979 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 GLTPD2A6NH11 291 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 E7ESA3 106 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 DPYSL4O14531 572 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 OAS1P00973 400 aaKnown RBP11.57□□□□□ -0.56
CMSS1-208ENST00000496116 PFKMP08237 780 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 TSHRP16473 764 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 GBP2P32456 591 aaPredicted RBP11.57□□□□□ -0.56
CMSS1-208ENST00000496116 RGS7P49802 495 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 SLC6A3Q01959 620 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 RNASELQ05823 741 aaKnown RBP11.57□□□□□ -0.56
CMSS1-208ENST00000496116 DPYSL3Q14195 570 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 C15orf59Q2T9L4 293 aaPredicted RBP11.57□□□□□ -0.56
CMSS1-208ENST00000496116 EFHC2Q5JST6 749 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 SH3PXD2AQ5TCZ1 1133 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 OLFML1Q6UWY5 402 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 SESTD1Q86VW0 696 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 VSIG1Q86XK7 387 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 ANKMY2Q8IV38 441 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 GBP7Q8N8V2 638 aaPredicted RBP11.57□□□□□ -0.56
CMSS1-208ENST00000496116 TBCBQ99426 244 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 PARK7Q99497 189 aaKnown RBP11.57□□□□□ -0.56
CMSS1-208ENST00000496116 MRPL45Q9BRJ2 306 aaKnown RBP11.57□□□□□ -0.56
CMSS1-208ENST00000496116 DNAI2Q9GZS0 605 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 FAM49AQ9H0Q0 323 aaPredicted RBP11.57□□□□□ -0.56
CMSS1-208ENST00000496116 ADAMTS10Q9H324 1103 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 C10orf88Q9H8K7 445 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 CLEC11AQ9Y240 323 aa11.57□□□□□ -0.56
CMSS1-208ENST00000496116 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.56□□□□□ -0.56
CMSS1-208ENST00000496116 GRAP2O75791 330 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 DNAJC8O75937 253 aaPredicted RBP11.56□□□□□ -0.56
CMSS1-208ENST00000496116 TGM2P21980 687 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 HOXA11P31270 313 aaPredicted RBP11.56□□□□□ -0.56
CMSS1-208ENST00000496116 HNRNPH1P31943 449 aaKnown RBP11.56□□□□□ -0.56
CMSS1-208ENST00000496116 ATP11AP98196 1134 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 MMRN1Q13201 1228 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 SPARCL1Q14515 664 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 PKN2Q16513 984 aaKnown RBP11.56□□□□□ -0.56
CMSS1-208ENST00000496116 FAM110CQ1W6H9 321 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 SPRED3Q2MJR0 410 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 CCDC14Q49A88 953 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 PKDCCQ504Y2 493 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 FNBP1LQ5T0N5 605 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms