RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 RFX6Q8HWS3 928 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 ADGRF2Q8IZF7 708 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 TOP6BLQ8N6T0 577 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 KCTD6Q8NC69 237 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 STK32AQ8WU08 396 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 C1orf54Q8WWF1 131 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 RSAD2Q8WXG1 361 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 TFAP2BQ92481 460 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 ART4Q93070 314 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 PGBD4Q96DM1 585 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 THAP11Q96EK4 314 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 MCRS1Q96EZ8 462 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 CCDC97Q96F63 343 aaPredicted RBP7.26□□□□□ -1.25
USP39-219ENST00000496047 POM121Q96HA1 1249 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 TTC25Q96NG3 672 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 TBCBQ99426 244 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 HINFPQ9BQA5 517 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 CNPY3Q9BT09 278 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 CAPS2Q9BXY5 557 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 EIF2AQ9BY44 585 aaKnown RBP7.26□□□□□ -1.25
USP39-219ENST00000496047 ELOVL4Q9GZR5 314 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 SDCBP2Q9H190 292 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 PABPC3Q9H361 631 aaKnown RBP7.26□□□□□ -1.25
USP39-219ENST00000496047 NXF3Q9H4D5 531 aaKnown RBP7.26□□□□□ -1.25
USP39-219ENST00000496047 CNOT10Q9H9A5 744 aaKnown RBP7.26□□□□□ -1.25
USP39-219ENST00000496047 RSAD1Q9HA92 442 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 UBN1Q9NPG3 1134 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 XPNPEP3Q9NQH7 507 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 FLRT1Q9NZU1 646 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.26□□□□□ -1.25
USP39-219ENST00000496047 FAM153AQ9UHL3 310 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 GTF2IRD1Q9UHL9 959 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 ANAPC5Q9UJX4 755 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 ZNF148Q9UQR1 794 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 IPPQ9Y573 584 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 CDY2AQ9Y6F7 541 aa7.26□□□□□ -1.25
USP39-219ENST00000496047 A0A0C4DFX4 3053 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 hCG_1818297A0A087WSY0 165 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 TCRBV5S1A1TA0A578 114 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 CFAP69A5D8W1 941 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 AGPSO00116 658 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 SGK1O00141 431 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 RGS16O15492 202 aaPredicted RBP7.25□□□□□ -1.25
USP39-219ENST00000496047 ADCY6O43306 1168 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 CAND2O75155 1236 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 KRT14P02533 472 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 NUDT17P0C025 328 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 ATP2A2P16615 1042 aaKnown RBP7.25□□□□□ -1.25
USP39-219ENST00000496047 ZFXP17010 805 aaPredicted RBP7.25□□□□□ -1.25
USP39-219ENST00000496047 LRPAP1P30533 357 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 HOXA11P31270 313 aaPredicted RBP7.25□□□□□ -1.25
USP39-219ENST00000496047 RPL21P46778 160 aaKnown RBP7.25□□□□□ -1.25
USP39-219ENST00000496047 ZNF143P52747 638 aaPredicted RBP7.25□□□□□ -1.25
USP39-219ENST00000496047 VCPP55072 806 aaKnown RBP7.25□□□□□ -1.25
USP39-219ENST00000496047 TAS2R40P59535 323 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 RPL7AP62424 266 aaKnown RBP7.25□□□□□ -1.25
USP39-219ENST00000496047 PLCB3Q01970 1234 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 KLF1Q13351 362 aaPredicted RBP7.25□□□□□ -1.25
USP39-219ENST00000496047 SIX1Q15475 284 aaPredicted RBP7.25□□□□□ -1.25
USP39-219ENST00000496047 EFHC1Q5JVL4 640 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 GLRA4Q5JXX5 417 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 C6orf118Q5T5N4 469 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 IZUMO3Q5VZ72 239 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 TTC27Q6P3X3 843 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 C4orf22Q6V702 233 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 PPP1R21Q6ZMI0 780 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 KDM7AQ6ZMT4 941 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 RNF180Q86T96 592 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 ACOT1Q86TX2 421 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 METTL23Q86XA0 190 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 IQCKQ8N0W5 287 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 TMEM86AQ8N2M4 240 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 RIBC1Q8N443 379 aaPredicted RBP7.25□□□□□ -1.25
USP39-219ENST00000496047 SPATA18Q8TC71 538 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 FBXO25Q8TCJ0 367 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 LRRN4Q8WUT4 740 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 TEKT4Q8WW24 435 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 HSFY1Q96LI6 401 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 CPXM1Q96SM3 734 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 MED10Q9BTT4 135 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 TRIM62Q9BVG3 475 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 HEMGNQ9BXL5 484 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 ROPN1BQ9BZX4 212 aaPredicted RBP7.25□□□□□ -1.25
USP39-219ENST00000496047 FAM107BQ9H098 131 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 ZWILCHQ9H900 591 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 PPCSQ9HAB8 311 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 ROPN1Q9HAT0 212 aaPredicted RBP7.25□□□□□ -1.25
USP39-219ENST00000496047 PRDM16Q9HAZ2 1276 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 TMBIM4Q9HC24 238 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 PCDH9Q9HC56 1237 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 GDAP2Q9NXN4 497 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 BCCIPQ9P287 314 aaKnown RBP eCLIP7.25□□□□□ -1.25
USP39-219ENST00000496047 TUBGCP4Q9UGJ1 667 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 GJD2Q9UKL4 321 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 STAP1Q9ULZ2 295 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 USP18Q9UMW8 372 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 DRG1Q9Y295 367 aaKnown RBP7.25□□□□□ -1.25
USP39-219ENST00000496047 GIT1Q9Y2X7 761 aa7.25□□□□□ -1.25
USP39-219ENST00000496047 PLXNA3P51805 1871 aa7.24□□□□□ -1.25
USP39-219ENST00000496047 MICAL3Q7RTP6 2002 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms