RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, human

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-223	ENST00000496024	TTLL2	Q9BWV7	592 aa		10.39	□□□□□ -0.75
CALD1-223	ENST00000496024	DUSP16	Q9BY84	665 aa		10.39	□□□□□ -0.75
CALD1-223	ENST00000496024	FAM124B	Q9H5Z6	455 aa	Predicted RBP	10.39	□□□□□ -0.75
CALD1-223	ENST00000496024	CSNK1G1	Q9HCP0	422 aa		10.39	□□□□□ -0.75
CALD1-223	ENST00000496024	SIX2	Q9NPC8	291 aa		10.39	□□□□□ -0.75
CALD1-223	ENST00000496024	EHD2	Q9NZN4	543 aa		10.39	□□□□□ -0.75
CALD1-223	ENST00000496024	HESX1	Q9UBX0	185 aa		10.39	□□□□□ -0.75
CALD1-223	ENST00000496024	APEX2	Q9UBZ4	518 aa		10.39	□□□□□ -0.75
CALD1-223	ENST00000496024	AJAP1	Q9UKB5	411 aa	Predicted RBP	10.39	□□□□□ -0.75
CALD1-223	ENST00000496024	TSPAN16	Q9UKR8	245 aa		10.39	□□□□□ -0.75
CALD1-223	ENST00000496024	DUSP12	Q9UNI6	340 aa		10.39	□□□□□ -0.75
CALD1-223	ENST00000496024	NUP210	Q8TEM1	1887 aa	Predicted RBP	10.38	□□□□□ -0.75
CALD1-223	ENST00000496024	NCAN	O14594	1321 aa		10.38	□□□□□ -0.75
CALD1-223	ENST00000496024	TRAV19	A0A0A6YYK7	116 aa		10.38	□□□□□ -0.75
CALD1-223	ENST00000496024	TMEM221	A6NGB7	291 aa		10.38	□□□□□ -0.75
CALD1-223	ENST00000496024		M0R296	226 aa		10.38	□□□□□ -0.75
CALD1-223	ENST00000496024	TNFRSF10B	O14763	440 aa		10.38	□□□□□ -0.75
CALD1-223	ENST00000496024	ECI2	O75521	394 aa		10.38	□□□□□ -0.75
CALD1-223	ENST00000496024	CKM	P06732	381 aa		10.38	□□□□□ -0.75
CALD1-223	ENST00000496024	PAEP	P09466	180 aa		10.38	□□□□□ -0.75
CALD1-223	ENST00000496024	PNMA6A	P0CW24	399 aa	Predicted RBP	10.38	□□□□□ -0.75
CALD1-223	ENST00000496024	SRF	P11831	508 aa		10.38	□□□□□ -0.75
CALD1-223	ENST00000496024	ATP1A3	P13637	1013 aa		10.38	□□□□□ -0.75
CALD1-223	ENST00000496024	DDX6	P26196	483 aa	Known RBP eCLIP	10.38	□□□□□ -0.75
CALD1-223	ENST00000496024	GDI1	P31150	447 aa		10.38	□□□□□ -0.75
CALD1-223	ENST00000496024	KLK7	P49862	253 aa		10.38	□□□□□ -0.75
CALD1-223	ENST00000496024	PDE4C	Q08493	712 aa		10.38	□□□□□ -0.75
CALD1-223	ENST00000496024	SIGLEC14	Q08ET2	396 aa		10.38	□□□□□ -0.75
CALD1-223	ENST00000496024	KCNMA1	Q12791	1236 aa		10.38	□□□□□ -0.75
CALD1-223	ENST00000496024	FKBP15	Q5T1M5	1219 aa		10.38	□□□□□ -0.75
CALD1-223	ENST00000496024	VIT	Q6UXI7	678 aa		10.38	□□□□□ -0.75
CALD1-223	ENST00000496024	ENOSF1	Q7L5Y1	443 aa		10.38	□□□□□ -0.75
CALD1-223	ENST00000496024	DHX40	Q8IX18	779 aa	Known RBP	10.38	□□□□□ -0.75
CALD1-223	ENST00000496024	YAF2	Q8IY57	180 aa		10.38	□□□□□ -0.75
CALD1-223	ENST00000496024	CMTM8	Q8IZV2	173 aa		10.38	□□□□□ -0.75
CALD1-223	ENST00000496024	ANKRD52	Q8NB46	1076 aa		10.38	□□□□□ -0.75
CALD1-223	ENST00000496024	PCMTD1	Q96MG8	357 aa	Predicted RBP	10.38	□□□□□ -0.75
CALD1-223	ENST00000496024	SLC22A12	Q96S37	553 aa		10.38	□□□□□ -0.75
CALD1-223	ENST00000496024	ZSWIM1	Q9BR11	485 aa		10.38	□□□□□ -0.75
CALD1-223	ENST00000496024	HSD3B7	Q9H2F3	369 aa		10.38	□□□□□ -0.75
CALD1-223	ENST00000496024	ACP6	Q9NPH0	428 aa		10.38	□□□□□ -0.75
CALD1-223	ENST00000496024	GMIP	Q9P107	970 aa		10.38	□□□□□ -0.75
CALD1-223	ENST00000496024	LIMA1	Q9UHB6	759 aa	Known RBP	10.38	□□□□□ -0.75
CALD1-223	ENST00000496024	DNAJC12	Q9UKB3	198 aa		10.38	□□□□□ -0.75
CALD1-223	ENST00000496024	CA14	Q9ULX7	337 aa		10.38	□□□□□ -0.75
CALD1-223	ENST00000496024	CCL26	Q9Y258	94 aa		10.38	□□□□□ -0.75
CALD1-223	ENST00000496024	PATJ	Q8NI35	1801 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	F5	P12259	2224 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	ZNF840P	A6NDX5	716 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	HHLA1	C9JL84	531 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024		M0QYV0	167 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	TULP2	O00295	520 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024		O00370	1275 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	PIK3R2	O00459	728 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	STK25	O00506	426 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	THAP12	O43422	761 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	PDGFB	P01127	241 aa	Predicted RBP	10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	ZNF18	P17022	549 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	PSMC3	P17980	439 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	HDC	P19113	662 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	PGF	P49763	221 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	RGS7	P49802	495 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	ZNF132	P52740	706 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	BCAT1	P54687	386 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	SLC8A3	P57103	927 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	UBXN1	Q04323	297 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	RAPGEF1	Q13905	1077 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	IQCB1	Q15051	598 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	TMEM31	Q5JXX7	168 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	IER5L	Q5T953	404 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	PIGZ	Q86VD9	579 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	USP13	Q92995	863 aa	Predicted RBP	10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	ZFYVE19	Q96K21	471 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	FAM81B	Q96LP2	452 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	LRRC3B	Q96PB8	259 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	BPIFA3	Q9BQP9	254 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	TRMT61B	Q9BVS5	477 aa	Known RBP	10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	C1QTNF1	Q9BXJ1	281 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	FBXO44	Q9H4M3	255 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	BRD9	Q9H8M2	597 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	TRPV4	Q9HBA0	871 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	CBX8	Q9HC52	389 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	C11orf16	Q9NQ32	467 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	TDP1	Q9NUW8	608 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	KIAA1257	Q9ULG3	409 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	FHOD1	Q9Y613	1164 aa		10.37	□□□□□ -0.75
CALD1-223	ENST00000496024	LGALS16	A8MUM7	142 aa		10.36	□□□□□ -0.75
CALD1-223	ENST00000496024	FOXN3	O00409	490 aa	Predicted RBP	10.36	□□□□□ -0.75
CALD1-223	ENST00000496024	CYP26A1	O43174	497 aa		10.36	□□□□□ -0.75
CALD1-223	ENST00000496024	USP17L7	P0C7H9	530 aa		10.36	□□□□□ -0.75
CALD1-223	ENST00000496024	RFX1	P22670	979 aa		10.36	□□□□□ -0.75
CALD1-223	ENST00000496024	GNA15	P30679	374 aa		10.36	□□□□□ -0.75
CALD1-223	ENST00000496024	PPP3CC	P48454	512 aa		10.36	□□□□□ -0.75
CALD1-223	ENST00000496024	KIF11	P52732	1056 aa		10.36	□□□□□ -0.75
CALD1-223	ENST00000496024	BST2	Q10589	180 aa	Known RBP	10.36	□□□□□ -0.75
CALD1-223	ENST00000496024	DRAP1	Q14919	205 aa	Predicted RBP	10.36	□□□□□ -0.75
CALD1-223	ENST00000496024	SYCP1	Q15431	976 aa		10.36	□□□□□ -0.75
CALD1-223	ENST00000496024	CNGA2	Q16280	664 aa		10.36	□□□□□ -0.75
CALD1-223	ENST00000496024	KLHDC7A	Q5VTJ3	777 aa		10.36	□□□□□ -0.75
CALD1-223	ENST00000496024	DPY19L2P1	Q6NXN4	242 aa		10.36	□□□□□ -0.75

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