RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 NPR3P17342 541 aa13.1□□□□□ -0.31
MRPL55-233ENST00000495899 COL9A1P20849 921 aa13.1□□□□□ -0.31
MRPL55-233ENST00000495899 YWHAQP27348 245 aa13.1□□□□□ -0.31
MRPL55-233ENST00000495899 RAD23BP54727 409 aa13.1□□□□□ -0.31
MRPL55-233ENST00000495899 MLLT6P55198 1093 aaPredicted RBP13.1□□□□□ -0.31
MRPL55-233ENST00000495899 PRSS12P56730 875 aa13.1□□□□□ -0.31
MRPL55-233ENST00000495899 STARD6P59095 220 aa13.1□□□□□ -0.31
MRPL55-233ENST00000495899 USP46P62068 366 aa13.1□□□□□ -0.31
MRPL55-233ENST00000495899 GCNT1Q02742 428 aa13.1□□□□□ -0.31
MRPL55-233ENST00000495899 PRKCQQ04759 706 aa13.1□□□□□ -0.31
MRPL55-233ENST00000495899 ORC1Q13415 861 aa13.1□□□□□ -0.31
MRPL55-233ENST00000495899 ZNF268Q14587 947 aaPredicted RBP13.1□□□□□ -0.31
MRPL55-233ENST00000495899 SLC44A4Q53GD3 710 aa13.1□□□□□ -0.31
MRPL55-233ENST00000495899 YAF2Q8IY57 180 aa13.1□□□□□ -0.31
MRPL55-233ENST00000495899 MAB21L3Q8N8X9 362 aa13.1□□□□□ -0.31
MRPL55-233ENST00000495899 SLC4A11Q8NBS3 891 aa13.1□□□□□ -0.31
MRPL55-233ENST00000495899 STKLD1Q8NE28 680 aa13.1□□□□□ -0.31
MRPL55-233ENST00000495899 PDZD8Q8NEN9 1154 aa13.1□□□□□ -0.31
MRPL55-233ENST00000495899 JAKMIP2Q96AA8 810 aa13.1□□□□□ -0.31
MRPL55-233ENST00000495899 SLITRK1Q96PX8 696 aa13.1□□□□□ -0.31
MRPL55-233ENST00000495899 SMOQ99835 787 aa13.1□□□□□ -0.31
MRPL55-233ENST00000495899 ARID3AQ99856 593 aa13.1□□□□□ -0.31
MRPL55-233ENST00000495899 UBXN6Q9BZV1 441 aa13.1□□□□□ -0.31
MRPL55-233ENST00000495899 BRD9Q9H8M2 597 aa13.1□□□□□ -0.31
MRPL55-233ENST00000495899 KIF9Q9HAQ2 790 aa13.1□□□□□ -0.31
MRPL55-233ENST00000495899 PNPLA8Q9NP80 782 aa13.1□□□□□ -0.31
MRPL55-233ENST00000495899 ARHGEF3Q9NR81 526 aa13.1□□□□□ -0.31
MRPL55-233ENST00000495899 KRT82Q9NSB4 513 aa13.1□□□□□ -0.31
MRPL55-233ENST00000495899 FAM49BQ9NUQ9 324 aa13.1□□□□□ -0.31
MRPL55-233ENST00000495899 TDP1Q9NUW8 608 aa13.1□□□□□ -0.31
MRPL55-233ENST00000495899 THG1LQ9NWX6 298 aaKnown RBP13.1□□□□□ -0.31
MRPL55-233ENST00000495899 HCN4Q9Y3Q4 1203 aa13.1□□□□□ -0.31
MRPL55-233ENST00000495899 NCANO14594 1321 aa13.1□□□□□ -0.31
MRPL55-233ENST00000495899 TRAV19A0A0A6YYK7 116 aa13.09□□□□□ -0.31
MRPL55-233ENST00000495899 FAM92AA1XBS5 289 aa13.09□□□□□ -0.31
MRPL55-233ENST00000495899 ZNF840PA6NDX5 716 aa13.09□□□□□ -0.31
MRPL55-233ENST00000495899 TECTAO75443 2155 aa13.09□□□□□ -0.31
MRPL55-233ENST00000495899 TADA3O75528 432 aa13.09□□□□□ -0.31
MRPL55-233ENST00000495899 PDGFBP01127 241 aaPredicted RBP13.09□□□□□ -0.31
MRPL55-233ENST00000495899 USP17L7P0C7H9 530 aa13.09□□□□□ -0.31
MRPL55-233ENST00000495899 GLULP15104 373 aa13.09□□□□□ -0.31
MRPL55-233ENST00000495899 AVPR2P30518 371 aa13.09□□□□□ -0.31
MRPL55-233ENST00000495899 GDI1P31150 447 aa13.09□□□□□ -0.31
MRPL55-233ENST00000495899 LRMPQ12912 555 aa13.09□□□□□ -0.31
MRPL55-233ENST00000495899 TAF10Q12962 218 aa13.09□□□□□ -0.31
MRPL55-233ENST00000495899 GRM2Q14416 872 aa13.09□□□□□ -0.31
MRPL55-233ENST00000495899 ARHGAP29Q52LW3 1261 aa13.09□□□□□ -0.31
MRPL55-233ENST00000495899 ZNF394Q53GI3 561 aa13.09□□□□□ -0.31
MRPL55-233ENST00000495899 CCDC183Q5T5S1 534 aa13.09□□□□□ -0.31
MRPL55-233ENST00000495899 SNX30Q5VWJ9 437 aa13.09□□□□□ -0.31
MRPL55-233ENST00000495899 ARHGAP17Q68EM7 881 aa13.09□□□□□ -0.31
MRPL55-233ENST00000495899 SASS6Q6UVJ0 657 aa13.09□□□□□ -0.31
MRPL55-233ENST00000495899 CREBRFQ8IUR6 639 aa13.09□□□□□ -0.31
MRPL55-233ENST00000495899 UBR7Q8N806 425 aa13.09□□□□□ -0.31
MRPL55-233ENST00000495899 ZMIZ2Q8NF64 920 aa13.09□□□□□ -0.31
MRPL55-233ENST00000495899 ENOX1Q8TC92 643 aaKnown RBP13.09□□□□□ -0.31
MRPL55-233ENST00000495899 BPIFB1Q8TDL5 484 aa13.09□□□□□ -0.31
MRPL55-233ENST00000495899 RSPRY1Q96DX4 576 aa13.09□□□□□ -0.31
MRPL55-233ENST00000495899 FAM81BQ96LP2 452 aa13.09□□□□□ -0.31
MRPL55-233ENST00000495899 KCNK17Q96T54 332 aa13.09□□□□□ -0.31
MRPL55-233ENST00000495899 PRRX2Q99811 253 aa13.09□□□□□ -0.31
MRPL55-233ENST00000495899 DUSP16Q9BY84 665 aa13.09□□□□□ -0.31
MRPL55-233ENST00000495899 FBXO44Q9H4M3 255 aa13.09□□□□□ -0.31
MRPL55-233ENST00000495899 CA14Q9ULX7 337 aa13.09□□□□□ -0.31
MRPL55-233ENST00000495899 DOCK6Q96HP0 2047 aa13.08□□□□□ -0.31
MRPL55-233ENST00000495899 GTPBP10A4D1E9 387 aaKnown RBP13.08□□□□□ -0.32
MRPL55-233ENST00000495899 BEST1O76090 585 aa13.08□□□□□ -0.32
MRPL55-233ENST00000495899 PRAMEF12O95522 483 aa13.08□□□□□ -0.32
MRPL55-233ENST00000495899 PAEPP09466 180 aa13.08□□□□□ -0.32
MRPL55-233ENST00000495899 HDCP19113 662 aa13.08□□□□□ -0.32
MRPL55-233ENST00000495899 AOC1P19801 751 aa13.08□□□□□ -0.32
MRPL55-233ENST00000495899 ADORA2BP29275 332 aa13.08□□□□□ -0.32
MRPL55-233ENST00000495899 MTIF2P46199 727 aaKnown RBP13.08□□□□□ -0.32
MRPL55-233ENST00000495899 SLC5A3P53794 718 aa13.08□□□□□ -0.32
MRPL55-233ENST00000495899 MAP3K7CLP57077 242 aa13.08□□□□□ -0.32
MRPL55-233ENST00000495899 SLC8A3P57103 927 aa13.08□□□□□ -0.32
MRPL55-233ENST00000495899 MLF2Q15773 248 aaPredicted RBP13.08□□□□□ -0.32
MRPL55-233ENST00000495899 PPP1R26Q5T8A7 1209 aaPredicted RBP13.08□□□□□ -0.32
MRPL55-233ENST00000495899 CLEC20AQ6ZU45 233 aa13.08□□□□□ -0.32
MRPL55-233ENST00000495899 ENOSF1Q7L5Y1 443 aa13.08□□□□□ -0.32
MRPL55-233ENST00000495899 PPM1KQ8N3J5 372 aa13.08□□□□□ -0.32
MRPL55-233ENST00000495899 KIAA1958Q8N8K9 716 aa13.08□□□□□ -0.32
MRPL55-233ENST00000495899 USP13Q92995 863 aaPredicted RBP13.08□□□□□ -0.32
MRPL55-233ENST00000495899 LRRC3BQ96PB8 259 aa13.08□□□□□ -0.32
MRPL55-233ENST00000495899 NELL2Q99435 816 aa13.08□□□□□ -0.32
MRPL55-233ENST00000495899 DDX23Q9BUQ8 820 aaKnown RBP13.08□□□□□ -0.32
MRPL55-233ENST00000495899 INTS2Q9H0H0 1204 aaKnown RBP13.08□□□□□ -0.32
MRPL55-233ENST00000495899 TRPC7Q9HCX4 862 aa13.08□□□□□ -0.32
MRPL55-233ENST00000495899 ANO10Q9NW15 660 aa13.08□□□□□ -0.32
MRPL55-233ENST00000495899 GCNT4Q9P109 453 aa13.08□□□□□ -0.32
MRPL55-233ENST00000495899 MYO10Q9HD67 2058 aa13.08□□□□□ -0.32
MRPL55-233ENST00000495899 C2orf78A6NCI8 922 aa13.07□□□□□ -0.32
MRPL55-233ENST00000495899 ARNTLO00327 626 aa13.07□□□□□ -0.32
MRPL55-233ENST00000495899 MAN2B1O00754 1011 aa13.07□□□□□ -0.32
MRPL55-233ENST00000495899 CKMP06732 381 aa13.07□□□□□ -0.32
MRPL55-233ENST00000495899 ZDHHC11BP0C7U3 371 aa13.07□□□□□ -0.32
MRPL55-233ENST00000495899 VDRP11473 427 aa13.07□□□□□ -0.32
MRPL55-233ENST00000495899 TCF3P15923 654 aa13.07□□□□□ -0.32
MRPL55-233ENST00000495899 ACO1P21399 889 aaKnown RBP13.07□□□□□ -0.32
MRPL55-233ENST00000495899 RFX1P22670 979 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms