RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 TSHZ3Q63HK5 1081 aa7.46□□□□□ -1.22
VIM-207ENST00000495528 TAPT1Q6NXT6 567 aa7.46□□□□□ -1.22
VIM-207ENST00000495528 LIMS2Q7Z4I7 341 aa7.46□□□□□ -1.22
VIM-207ENST00000495528 SLC41A1Q8IVJ1 513 aa7.46□□□□□ -1.22
VIM-207ENST00000495528 CBARPQ8N350 705 aaPredicted RBP7.46□□□□□ -1.22
VIM-207ENST00000495528 KBTBD3Q8NAB2 608 aa7.46□□□□□ -1.22
VIM-207ENST00000495528 GMCL1P1Q8NEA9 526 aa7.46□□□□□ -1.22
VIM-207ENST00000495528 NEIL1Q96FI4 390 aaPredicted RBP7.46□□□□□ -1.22
VIM-207ENST00000495528 RAX2Q96IS3 184 aa7.46□□□□□ -1.22
VIM-207ENST00000495528 RPL10LQ96L21 214 aaKnown RBP7.46□□□□□ -1.22
VIM-207ENST00000495528 GNRHR2Q96P88 292 aa7.46□□□□□ -1.22
VIM-207ENST00000495528 LMF1Q96S06 567 aa7.46□□□□□ -1.22
VIM-207ENST00000495528 MENTQ9BUN1 341 aa7.46□□□□□ -1.22
VIM-207ENST00000495528 TRPV6Q9H1D0 765 aa7.46□□□□□ -1.22
VIM-207ENST00000495528 HIPK3Q9H422 1215 aa7.46□□□□□ -1.22
VIM-207ENST00000495528 ACAD9Q9H845 621 aa7.46□□□□□ -1.22
VIM-207ENST00000495528 SLC28A3Q9HAS3 691 aa7.46□□□□□ -1.22
VIM-207ENST00000495528 A1CFQ9NQ94 594 aaKnown RBP7.46□□□□□ -1.22
VIM-207ENST00000495528 PDGFCQ9NRA1 345 aa7.46□□□□□ -1.22
VIM-207ENST00000495528 ECHDC1Q9NTX5 307 aa7.46□□□□□ -1.22
VIM-207ENST00000495528 PUF60Q9UHX1 559 aaKnown RBP7.46□□□□□ -1.22
VIM-207ENST00000495528 CDY2AQ9Y6F7 541 aa7.46□□□□□ -1.22
VIM-207ENST00000495528 PLXNA1Q9UIW2 1896 aa7.45□□□□□ -1.22
VIM-207ENST00000495528 NPEPPSL1A6NEC2 478 aa7.45□□□□□ -1.22
VIM-207ENST00000495528 ASB14A6NK59 587 aa7.45□□□□□ -1.22
VIM-207ENST00000495528 GABRDO14764 452 aa7.45□□□□□ -1.22
VIM-207ENST00000495528 NRP2O60462 931 aa7.45□□□□□ -1.22
VIM-207ENST00000495528 CABYRO75952 493 aa7.45□□□□□ -1.22
VIM-207ENST00000495528 FSBPO95073 299 aa7.45□□□□□ -1.22
VIM-207ENST00000495528 PLATP00750 562 aa7.45□□□□□ -1.22
VIM-207ENST00000495528 TSPY3P0CV98 308 aa7.45□□□□□ -1.22
VIM-207ENST00000495528 TSPY8P0CW00 308 aa7.45□□□□□ -1.22
VIM-207ENST00000495528 ALAS1P13196 640 aa7.45□□□□□ -1.22
VIM-207ENST00000495528 MCCP23508 829 aa7.45□□□□□ -1.22
VIM-207ENST00000495528 GPR15P49685 360 aa7.45□□□□□ -1.22
VIM-207ENST00000495528 STAT2P52630 851 aa7.45□□□□□ -1.22
VIM-207ENST00000495528 NRG3P56975 720 aa7.45□□□□□ -1.22
VIM-207ENST00000495528 BPIFB4P59827 614 aa7.45□□□□□ -1.22
VIM-207ENST00000495528 TFAP4Q01664 338 aa7.45□□□□□ -1.22
VIM-207ENST00000495528 MAN2A1Q16706 1144 aa7.45□□□□□ -1.22
VIM-207ENST00000495528 MUM1L1Q5H9M0 696 aa7.45□□□□□ -1.22
VIM-207ENST00000495528 ZFYVE27Q5T4F4 411 aa7.45□□□□□ -1.22
VIM-207ENST00000495528 LCE1DQ5T752 114 aa7.45□□□□□ -1.22
VIM-207ENST00000495528 CLEC14AQ86T13 490 aa7.45□□□□□ -1.22
VIM-207ENST00000495528 TLK2Q86UE8 772 aa7.45□□□□□ -1.22
VIM-207ENST00000495528 ANKRD53Q8N9V6 530 aa7.45□□□□□ -1.22
VIM-207ENST00000495528 PLA2G15Q8NCC3 412 aa7.45□□□□□ -1.22
VIM-207ENST00000495528 PIK3C3Q8NEB9 887 aa7.45□□□□□ -1.22
VIM-207ENST00000495528 OTUD7AQ8TE49 926 aaPredicted RBP7.45□□□□□ -1.22
VIM-207ENST00000495528 CHURC1Q8WUH1 139 aa7.45□□□□□ -1.22
VIM-207ENST00000495528 STAG1Q8WVM7 1258 aa7.45□□□□□ -1.22
VIM-207ENST00000495528 AUTS2Q8WXX7 1259 aa7.45□□□□□ -1.22
VIM-207ENST00000495528 SLC2A13Q96QE2 648 aa7.45□□□□□ -1.22
VIM-207ENST00000495528 UHRF1Q96T88 793 aaPredicted RBP7.45□□□□□ -1.22
VIM-207ENST00000495528 SEC62Q99442 399 aaKnown RBP7.45□□□□□ -1.22
VIM-207ENST00000495528 BDH2Q9BUT1 245 aa7.45□□□□□ -1.22
VIM-207ENST00000495528 MTIF3Q9H2K0 278 aaKnown RBP7.45□□□□□ -1.22
VIM-207ENST00000495528 ZNF287Q9HBT7 754 aa7.45□□□□□ -1.22
VIM-207ENST00000495528 RNF146Q9NTX7 359 aa7.45□□□□□ -1.22
VIM-207ENST00000495528 MKS1Q9NXB0 559 aa7.45□□□□□ -1.22
VIM-207ENST00000495528 RTEL1Q9NZ71 1219 aa7.45□□□□□ -1.22
VIM-207ENST00000495528 PPP4R1LQ9P1A2 415 aa7.45□□□□□ -1.22
VIM-207ENST00000495528 ISY1Q9ULR0 285 aaKnown RBP7.45□□□□□ -1.22
VIM-207ENST00000495528 MYO9BQ13459 2157 aa7.44□□□□□ -1.22
VIM-207ENST00000495528 MATN2O00339 956 aa7.44□□□□□ -1.22
VIM-207ENST00000495528 CDC14BO60729 498 aa7.44□□□□□ -1.22
VIM-207ENST00000495528 SEC24DO94855 1032 aaPredicted RBP7.44□□□□□ -1.22
VIM-207ENST00000495528 LY86O95711 162 aa7.44□□□□□ -1.22
VIM-207ENST00000495528 GAAP10253 952 aa7.44□□□□□ -1.22
VIM-207ENST00000495528 CYP2C9P11712 490 aa7.44□□□□□ -1.22
VIM-207ENST00000495528 GNAT2P19087 354 aa7.44□□□□□ -1.22
VIM-207ENST00000495528 SLC1A4P43007 532 aa7.44□□□□□ -1.22
VIM-207ENST00000495528 MRPS9P82933 396 aaKnown RBP7.44□□□□□ -1.22
VIM-207ENST00000495528 TFF2Q03403 129 aa7.44□□□□□ -1.22
VIM-207ENST00000495528 HGFACQ04756 655 aa7.44□□□□□ -1.22
VIM-207ENST00000495528 IKQ13123 557 aaPredicted RBP7.44□□□□□ -1.22
VIM-207ENST00000495528 NFYCQ13952 458 aa7.44□□□□□ -1.22
VIM-207ENST00000495528 ACAP2Q15057 778 aa7.44□□□□□ -1.22
VIM-207ENST00000495528 PTPN21Q16825 1174 aa7.44□□□□□ -1.22
VIM-207ENST00000495528 KRT40Q6A162 431 aa7.44□□□□□ -1.22
VIM-207ENST00000495528 FAM160B2Q86V87 743 aa7.44□□□□□ -1.22
VIM-207ENST00000495528 GLB1L2Q8IW92 636 aa7.44□□□□□ -1.22
VIM-207ENST00000495528 FBXO16Q8IX29 292 aaPredicted RBP7.44□□□□□ -1.22
VIM-207ENST00000495528 RSAD2Q8WXG1 361 aa7.44□□□□□ -1.22
VIM-207ENST00000495528 CFHR4Q92496 578 aa7.44□□□□□ -1.22
VIM-207ENST00000495528 SLC7A6OSQ96CW6 309 aaPredicted RBP7.44□□□□□ -1.22
VIM-207ENST00000495528 ASPSCR1Q9BZE9 553 aa7.44□□□□□ -1.22
VIM-207ENST00000495528 OSBPL6Q9BZF3 934 aa7.44□□□□□ -1.22
VIM-207ENST00000495528 MEGF9Q9H1U4 602 aa7.44□□□□□ -1.22
VIM-207ENST00000495528 ALDH8A1Q9H2A2 487 aaPredicted RBP7.44□□□□□ -1.22
VIM-207ENST00000495528 TRMT13Q9NUP7 481 aaKnown RBP7.44□□□□□ -1.22
VIM-207ENST00000495528 DDX56Q9NY93 547 aaKnown RBP7.44□□□□□ -1.22
VIM-207ENST00000495528 CYP39A1Q9NYL5 469 aa7.44□□□□□ -1.22
VIM-207ENST00000495528 Q9Y3F1 56 aa7.44□□□□□ -1.22
VIM-207ENST00000495528 MUC3AQ02505 3323 aa7.44□□□□□ -1.22
VIM-207ENST00000495528 GREB1LQ9C091 1923 aaPredicted RBP7.43□□□□□ -1.22
VIM-207ENST00000495528 NMT2O60551 498 aa7.43□□□□□ -1.22
VIM-207ENST00000495528 PLA2G6O60733 806 aa7.43□□□□□ -1.22
VIM-207ENST00000495528 TOX4O94842 621 aa7.43□□□□□ -1.22
VIM-207ENST00000495528 ZFYP08048 801 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms