RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 RBP3P10745 1247 aa16.04■□□□□ 0.16
CALD1-222ENST00000495522 CDH6P55285 790 aa16.04■□□□□ 0.16
CALD1-222ENST00000495522 WDR4P57081 412 aaKnown RBP16.04■□□□□ 0.16
CALD1-222ENST00000495522 GEMIN4P57678 1058 aaKnown RBP16.04■□□□□ 0.16
CALD1-222ENST00000495522 GAD2Q05329 585 aa16.04■□□□□ 0.16
CALD1-222ENST00000495522 TFDP2Q14188 446 aa16.04■□□□□ 0.16
CALD1-222ENST00000495522 FNBP1LQ5T0N5 605 aa16.04■□□□□ 0.16
CALD1-222ENST00000495522 FUKQ8N0W3 1084 aa16.04■□□□□ 0.16
CALD1-222ENST00000495522 L3MBTL3Q96JM7 780 aaPredicted RBP16.04■□□□□ 0.16
CALD1-222ENST00000495522 ZMYND8Q9ULU4 1186 aaPredicted RBP16.04■□□□□ 0.16
CALD1-222ENST00000495522 STRNO43815 780 aa16.04■□□□□ 0.16
CALD1-222ENST00000495522 PRPSAP2O60256 369 aa16.04■□□□□ 0.16
CALD1-222ENST00000495522 ASMTLO95671 621 aa16.04■□□□□ 0.16
CALD1-222ENST00000495522 PFKMP08237 780 aa16.04■□□□□ 0.16
CALD1-222ENST00000495522 TAC1P20366 129 aa16.04■□□□□ 0.16
CALD1-222ENST00000495522 ROR1Q01973 937 aa16.04■□□□□ 0.16
CALD1-222ENST00000495522 NOMO1Q15155 1222 aa16.04■□□□□ 0.16
CALD1-222ENST00000495522 MTFR1Q15390 333 aa16.04■□□□□ 0.16
CALD1-222ENST00000495522 GOLGA7BQ2TAP0 167 aa16.04■□□□□ 0.16
CALD1-222ENST00000495522 MSS51Q4VC12 460 aa16.04■□□□□ 0.16
CALD1-222ENST00000495522 FAM47CQ5HY64 1035 aa16.04■□□□□ 0.16
CALD1-222ENST00000495522 SH3PXD2AQ5TCZ1 1133 aa16.04■□□□□ 0.16
CALD1-222ENST00000495522 TRNP1Q6NT89 227 aa16.04■□□□□ 0.16
CALD1-222ENST00000495522 DENND1AQ8TEH3 1009 aa16.04■□□□□ 0.16
CALD1-222ENST00000495522 GRAMD1AQ96CP6 724 aa16.04■□□□□ 0.16
CALD1-222ENST00000495522 GBA2Q9HCG7 927 aaPredicted RBP16.04■□□□□ 0.16
CALD1-222ENST00000495522 RABGEF1Q9UJ41 708 aa16.04■□□□□ 0.16
CALD1-222ENST00000495522 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.03■□□□□ 0.16
CALD1-222ENST00000495522 PIK3R2O00459 728 aa16.03■□□□□ 0.16
CALD1-222ENST00000495522 STIP1P31948 543 aaKnown RBP16.03■□□□□ 0.16
CALD1-222ENST00000495522 FOXN2P32314 431 aa16.03■□□□□ 0.16
CALD1-222ENST00000495522 MMRN1Q13201 1228 aa16.03■□□□□ 0.16
CALD1-222ENST00000495522 DPYSL3Q14195 570 aa16.03■□□□□ 0.16
CALD1-222ENST00000495522 C15orf59Q2T9L4 293 aaPredicted RBP16.03■□□□□ 0.16
CALD1-222ENST00000495522 MARCH8Q5T0T0 291 aa16.03■□□□□ 0.16
CALD1-222ENST00000495522 DPY19L2Q6NUT2 758 aa16.03■□□□□ 0.16
CALD1-222ENST00000495522 CYP4V2Q6ZWL3 525 aaPredicted RBP16.03■□□□□ 0.16
CALD1-222ENST00000495522 APBB1IPQ7Z5R6 666 aaPredicted RBP16.03■□□□□ 0.16
CALD1-222ENST00000495522 PDIK1LQ8N165 341 aa16.03■□□□□ 0.16
CALD1-222ENST00000495522 GBP7Q8N8V2 638 aaPredicted RBP16.03■□□□□ 0.16
CALD1-222ENST00000495522 PAIP2Q9BPZ3 127 aaKnown RBP16.03■□□□□ 0.16
CALD1-222ENST00000495522 PLEKHA5Q9HAU0 1116 aa16.03■□□□□ 0.16
CALD1-222ENST00000495522 PRKAG3Q9UGI9 489 aa16.03■□□□□ 0.16
CALD1-222ENST00000495522 DERAQ9Y315 318 aa16.03■□□□□ 0.16
CALD1-222ENST00000495522 PDHXO00330 501 aa16.03■□□□□ 0.16
CALD1-222ENST00000495522 DPYSL4O14531 572 aa16.03■□□□□ 0.16
CALD1-222ENST00000495522 TMEM63AO94886 807 aa16.03■□□□□ 0.16
CALD1-222ENST00000495522 SNAI1O95863 264 aaPredicted RBP16.03■□□□□ 0.16
CALD1-222ENST00000495522 TSHRP16473 764 aa16.03■□□□□ 0.16
CALD1-222ENST00000495522 BASP1P80723 227 aaKnown RBP16.03■□□□□ 0.16
CALD1-222ENST00000495522 SPARCL1Q14515 664 aa16.03■□□□□ 0.16
CALD1-222ENST00000495522 KLHL38Q2WGJ6 581 aa16.03■□□□□ 0.16
CALD1-222ENST00000495522 FAM133BQ5BKY9 247 aaKnown RBP16.03■□□□□ 0.16
CALD1-222ENST00000495522 CYB5D1Q6P9G0 228 aa16.03■□□□□ 0.16
CALD1-222ENST00000495522 DARS2Q6PI48 645 aaKnown RBP16.03■□□□□ 0.16
CALD1-222ENST00000495522 MAP7D3Q8IWC1 876 aa16.03■□□□□ 0.16
CALD1-222ENST00000495522 C12orf29Q8N999 325 aa16.03■□□□□ 0.16
CALD1-222ENST00000495522 FBXO36Q8NEA4 188 aa16.03■□□□□ 0.16
CALD1-222ENST00000495522 PIWIL1Q96J94 861 aaKnown RBP16.03■□□□□ 0.16
CALD1-222ENST00000495522 KIF9Q9HAQ2 790 aa16.03■□□□□ 0.16
CALD1-222ENST00000495522 XPO7Q9UIA9 1087 aaKnown RBP16.03■□□□□ 0.16
CALD1-222ENST00000495522 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.02■□□□□ 0.16
CALD1-222ENST00000495522 TCRBV7S3A2A0A539 114 aa16.02■□□□□ 0.16
CALD1-222ENST00000495522 NPTXRO95502 500 aa16.02■□□□□ 0.16
CALD1-222ENST00000495522 HOXD8P13378 290 aaPredicted RBP16.02■□□□□ 0.16
CALD1-222ENST00000495522 SSTR1P30872 391 aa16.02■□□□□ 0.16
CALD1-222ENST00000495522 RGS7P49802 495 aa16.02■□□□□ 0.16
CALD1-222ENST00000495522 RNASELQ05823 741 aaKnown RBP16.02■□□□□ 0.16
CALD1-222ENST00000495522 KRT81Q14533 505 aa16.02■□□□□ 0.16
CALD1-222ENST00000495522 CDO1Q16878 200 aa16.02■□□□□ 0.16
CALD1-222ENST00000495522 BBS9Q3SYG4 887 aa16.02■□□□□ 0.16
CALD1-222ENST00000495522 CGB2Q6NT52 195 aa16.02■□□□□ 0.16
CALD1-222ENST00000495522 NPNTQ6UXI9 565 aa16.02■□□□□ 0.16
CALD1-222ENST00000495522 C3orf62Q6ZUJ4 267 aa16.02■□□□□ 0.16
CALD1-222ENST00000495522 PALM2Q8IXS6 379 aa16.02■□□□□ 0.16
CALD1-222ENST00000495522 C4orf33Q8N1A6 199 aa16.02■□□□□ 0.16
CALD1-222ENST00000495522 TAB3Q8N5C8 712 aaPredicted RBP16.02■□□□□ 0.16
CALD1-222ENST00000495522 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.02■□□□□ 0.16
CALD1-222ENST00000495522 MRRFQ96E11 262 aaKnown RBP16.02■□□□□ 0.16
CALD1-222ENST00000495522 PITPNM3Q9BZ71 974 aa16.02■□□□□ 0.16
CALD1-222ENST00000495522 ACSS3Q9H6R3 686 aa16.02■□□□□ 0.16
CALD1-222ENST00000495522 GRAP2O75791 330 aa16.02■□□□□ 0.15
CALD1-222ENST00000495522 UBOX5O94941 541 aa16.02■□□□□ 0.15
CALD1-222ENST00000495522 MMP3P08254 477 aa16.02■□□□□ 0.15
CALD1-222ENST00000495522 SETSIPP0DME0 302 aa16.02■□□□□ 0.15
CALD1-222ENST00000495522 PDK2Q15119 407 aa16.02■□□□□ 0.15
CALD1-222ENST00000495522 CCDC14Q49A88 953 aa16.02■□□□□ 0.15
CALD1-222ENST00000495522 DUSP28Q4G0W2 176 aa16.02■□□□□ 0.15
CALD1-222ENST00000495522 RAB6CQ53S08 254 aa16.02■□□□□ 0.15
CALD1-222ENST00000495522 BOLA3Q53S33 107 aa16.02■□□□□ 0.15
CALD1-222ENST00000495522 PPP1R26Q5T8A7 1209 aaPredicted RBP16.02■□□□□ 0.15
CALD1-222ENST00000495522 ZC3H18Q86VM9 953 aaKnown RBP16.02■□□□□ 0.15
CALD1-222ENST00000495522 RNF157Q96PX1 679 aa16.02■□□□□ 0.15
CALD1-222ENST00000495522 MRPL45Q9BRJ2 306 aaKnown RBP16.02■□□□□ 0.15
CALD1-222ENST00000495522 WDR83Q9BRX9 315 aaKnown RBP16.02■□□□□ 0.15
CALD1-222ENST00000495522 RAB6CQ9H0N0 254 aa16.02■□□□□ 0.15
CALD1-222ENST00000495522 SSU72Q9NP77 194 aaKnown RBP16.02■□□□□ 0.15
CALD1-222ENST00000495522 SLC45A1Q9Y2W3 748 aa16.02■□□□□ 0.15
CALD1-222ENST00000495522 SNX9Q9Y5X1 595 aa16.02■□□□□ 0.15
CALD1-222ENST00000495522 ATP2A2P16615 1042 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms