RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 KRT28Q7Z3Y7 464 aa3.28□□□□□ -1.88
LRIF1-203ENST00000494675 LCORLQ8N3X6 602 aa3.28□□□□□ -1.88
LRIF1-203ENST00000494675 DNAJB14Q8TBM8 379 aa3.28□□□□□ -1.88
LRIF1-203ENST00000494675 TMEM171Q8WVE6 324 aa3.28□□□□□ -1.88
LRIF1-203ENST00000494675 ATRIPQ8WXE1 791 aa3.28□□□□□ -1.88
LRIF1-203ENST00000494675 ASB10Q8WXI3 467 aa3.28□□□□□ -1.88
LRIF1-203ENST00000494675 LPIN2Q92539 896 aa3.28□□□□□ -1.88
LRIF1-203ENST00000494675 MUL1Q969V5 352 aa3.28□□□□□ -1.88
LRIF1-203ENST00000494675 FUBP1Q96AE4 644 aaKnown RBP3.28□□□□□ -1.88
LRIF1-203ENST00000494675 TMEM41AQ96HV5 264 aa3.28□□□□□ -1.88
LRIF1-203ENST00000494675 SNX27Q96L92 541 aa3.28□□□□□ -1.88
LRIF1-203ENST00000494675 MLST8Q9BVC4 326 aa3.28□□□□□ -1.88
LRIF1-203ENST00000494675 WDR11Q9BZH6 1224 aa3.28□□□□□ -1.88
LRIF1-203ENST00000494675 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.28□□□□□ -1.881e-9■□□□□ 9.9
LRIF1-203ENST00000494675 PTPRHQ9HD43 1115 aa3.28□□□□□ -1.88
LRIF1-203ENST00000494675 DKK4Q9UBT3 224 aa3.28□□□□□ -1.88
LRIF1-203ENST00000494675 SSX2IPQ9Y2D8 614 aa3.28□□□□□ -1.88
LRIF1-203ENST00000494675 RIPOR2Q9Y4F9 1068 aa3.28□□□□□ -1.88
LRIF1-203ENST00000494675 HS3ST4Q9Y661 456 aa3.28□□□□□ -1.88
LRIF1-203ENST00000494675 A0A087WV62 115 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 FAM234BA2RU67 622 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 YY2O15391 372 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 FFAR2O15552 330 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 EIF3JO75822 258 aaKnown RBP3.27□□□□□ -1.89
LRIF1-203ENST00000494675 LMNAP02545 664 aaKnown RBP3.27□□□□□ -1.89
LRIF1-203ENST00000494675 PDHA1P08559 390 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 SRGNP10124 158 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 ADORA2AP29274 412 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 TRAPPC10P48553 1259 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 HNRNPMP52272 730 aaKnown RBP eCLIP3.27□□□□□ -1.89
LRIF1-203ENST00000494675 COPAP53621 1224 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 TAP1Q03518 808 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 SCAPQ12770 1279 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 EIF2B5Q13144 721 aaKnown RBP3.27□□□□□ -1.89
LRIF1-203ENST00000494675 CCNIQ14094 377 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 ZNF750Q32MQ0 723 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 CERCAMQ5T4B2 595 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 MZT2AQ6P582 158 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 CRTC1Q6UUV9 634 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 PCSK4Q6UW60 755 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 Q6ZPA2 131 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 EXOC8Q8IYI6 725 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 LNX2Q8N448 690 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 FAM109AQ8N4B1 249 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 MYCBPAPQ8TBZ2 947 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 OSCP1Q8WVF1 389 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 FBXL20Q96IG2 436 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 Q96MF0 132 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 AIFM2Q9BRQ8 373 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 TTLL2Q9BWV7 592 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 TRIM5Q9C035 493 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 PACSIN3Q9UKS6 424 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 SLC39A10Q9ULF5 831 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 CAPN11Q9UMQ6 739 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 A0A087WZ62 844 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 PIPSLA2A3N6 862 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 PLEKHD1A6NEE1 506 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 PEX1O43933 1283 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 COQ9O75208 318 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 TCEA3O75764 348 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 CSF1RP07333 972 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 EGR2P11161 476 aaPredicted RBP3.27□□□□□ -1.89
LRIF1-203ENST00000494675 ATICP31939 592 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 ALDH9A1P49189 494 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 PDE6CP51160 858 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 NXPH1P58417 271 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 MRPS21P82921 87 aaKnown RBP3.27□□□□□ -1.89
LRIF1-203ENST00000494675 ICA1Q05084 483 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 ELF2Q15723 593 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 CCDC142Q17RM4 750 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 USP17L6PQ6QN14 398 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 SMC5Q8IY18 1101 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 GLIS1Q8NBF1 620 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 ATG4AQ8WYN0 398 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 PGBD1Q96JS3 809 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 STK33Q9BYT3 514 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 RIOX1Q9H6W3 641 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 PPCSQ9HAB8 311 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 CYP4F11Q9HBI6 524 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 AS3MTQ9HBK9 375 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 GLOD4Q9HC38 313 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 TM7SF3Q9NS93 570 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 RGL1Q9NZL6 768 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 PTGFRNQ9P2B2 879 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 HPSEQ9Y251 543 aa3.27□□□□□ -1.89
LRIF1-203ENST00000494675 TLR5O60602 858 aa3.26□□□□□ -1.89
LRIF1-203ENST00000494675 RHOP08100 348 aa3.26□□□□□ -1.89
LRIF1-203ENST00000494675 CHRM2P08172 466 aa3.26□□□□□ -1.89
LRIF1-203ENST00000494675 HGFP14210 728 aa3.26□□□□□ -1.89
LRIF1-203ENST00000494675 GABRB3P28472 473 aa3.26□□□□□ -1.89
LRIF1-203ENST00000494675 ZEB1P37275 1124 aaPredicted RBP3.26□□□□□ -1.89
LRIF1-203ENST00000494675 MTHFSP49914 203 aa3.26□□□□□ -1.89
LRIF1-203ENST00000494675 PGDP52209 483 aa3.26□□□□□ -1.89
LRIF1-203ENST00000494675 KRTAP10-6P60371 365 aaPredicted RBP3.26□□□□□ -1.89
LRIF1-203ENST00000494675 BLOC1S1P78537 153 aa3.26□□□□□ -1.89
LRIF1-203ENST00000494675 SP2Q02086 613 aa3.26□□□□□ -1.89
LRIF1-203ENST00000494675 KRT72Q14CN4 511 aa3.26□□□□□ -1.89
LRIF1-203ENST00000494675 PUM3Q15397 648 aaKnown RBP3.26□□□□□ -1.89
LRIF1-203ENST00000494675 RAB30Q15771 203 aa3.26□□□□□ -1.89
LRIF1-203ENST00000494675 TBCCQ15814 346 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms