RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 MTHFRP42898 656 aa8.83□□□□□ -1
RIF1-211ENST00000494333 OSTNP61366 133 aa8.83□□□□□ -1
RIF1-211ENST00000494333 GRIN1Q05586 938 aa8.83□□□□□ -1
RIF1-211ENST00000494333 TNK2Q07912 1038 aa8.83□□□□□ -1
RIF1-211ENST00000494333 STRN3Q13033 797 aa8.83□□□□□ -1
RIF1-211ENST00000494333 HSP90AA2PQ14568 343 aaPredicted RBP8.83□□□□□ -1
RIF1-211ENST00000494333 NAB2Q15742 525 aa8.83□□□□□ -1
RIF1-211ENST00000494333 USP41Q3LFD5 358 aa8.83□□□□□ -1
RIF1-211ENST00000494333 ZNF568Q3ZCX4 644 aa8.83□□□□□ -1
RIF1-211ENST00000494333 TMEM119Q4V9L6 283 aa8.83□□□□□ -1
RIF1-211ENST00000494333 GLRA4Q5JXX5 417 aa8.83□□□□□ -1
RIF1-211ENST00000494333 FAM173BQ6P4H8 233 aa8.83□□□□□ -1
RIF1-211ENST00000494333 SPATA31D4Q6ZUB0 917 aa8.83□□□□□ -1
RIF1-211ENST00000494333 CEP57Q86XR8 500 aa8.83□□□□□ -1
RIF1-211ENST00000494333 PALB2Q86YC2 1186 aa8.83□□□□□ -1
RIF1-211ENST00000494333 FAM169BQ8N8A8 192 aa8.83□□□□□ -1
RIF1-211ENST00000494333 OR6P1Q8NGX9 317 aa8.83□□□□□ -1
RIF1-211ENST00000494333 RASSF8Q8NHQ8 419 aa8.83□□□□□ -1
RIF1-211ENST00000494333 FEZF2Q8TBJ5 459 aa8.83□□□□□ -1
RIF1-211ENST00000494333 HASPINQ8TF76 798 aa8.83□□□□□ -1
RIF1-211ENST00000494333 RIN2Q8WYP3 895 aaPredicted RBP8.83□□□□□ -1
RIF1-211ENST00000494333 EDAQ92838 391 aa8.83□□□□□ -1
RIF1-211ENST00000494333 ANAPC16Q96DE5 110 aa8.83□□□□□ -1
RIF1-211ENST00000494333 CALML4Q96GE6 196 aa8.83□□□□□ -1
RIF1-211ENST00000494333 RXFP1Q9HBX9 757 aa8.83□□□□□ -1
RIF1-211ENST00000494333 PTPRHQ9HD43 1115 aa8.83□□□□□ -1
RIF1-211ENST00000494333 KCND2Q9NZV8 630 aa8.83□□□□□ -1
RIF1-211ENST00000494333 LARSQ9P2J5 1176 aaKnown RBP8.83□□□□□ -1
RIF1-211ENST00000494333 NR2E1Q9Y466 385 aa8.83□□□□□ -1
RIF1-211ENST00000494333 CLIC4Q9Y696 253 aa8.83□□□□□ -1
RIF1-211ENST00000494333 ZMYM2Q9UBW7 1377 aa8.83□□□□□ -1
RIF1-211ENST00000494333 PHLPP2Q6ZVD8 1323 aa8.82□□□□□ -1
RIF1-211ENST00000494333 ARID2Q68CP9 1835 aa8.82□□□□□ -1
RIF1-211ENST00000494333 SMIM28A0A1B0GU29 152 aa8.82□□□□□ -1
RIF1-211ENST00000494333 C2CD4DB7Z1M9 353 aa8.82□□□□□ -1
RIF1-211ENST00000494333 SLC26A4O43511 780 aa8.82□□□□□ -1
RIF1-211ENST00000494333 LRRN2O75325 713 aa8.82□□□□□ -1
RIF1-211ENST00000494333 CLEC3AO75596 197 aa8.82□□□□□ -1
RIF1-211ENST00000494333 B3GAT3O94766 335 aa8.82□□□□□ -1
RIF1-211ENST00000494333 HARSP12081 509 aaKnown RBP8.82□□□□□ -1
RIF1-211ENST00000494333 RPL17P18621 184 aaKnown RBP8.82□□□□□ -1
RIF1-211ENST00000494333 MARCKSP29966 332 aaPredicted RBP8.82□□□□□ -1
RIF1-211ENST00000494333 LONP1P36776 959 aaKnown RBP8.82□□□□□ -1
RIF1-211ENST00000494333 ZXDAP98168 799 aa8.82□□□□□ -1
RIF1-211ENST00000494333 CEBPZQ03701 1054 aaKnown RBP8.82□□□□□ -1
RIF1-211ENST00000494333 KARSQ15046 597 aaKnown RBP8.82□□□□□ -1
RIF1-211ENST00000494333 SPECC1Q5M775 1068 aa8.82□□□□□ -1
RIF1-211ENST00000494333 ARTNQ5T4W7 220 aa8.82□□□□□ -1
RIF1-211ENST00000494333 FAM171A1Q5VUB5 890 aa8.82□□□□□ -1
RIF1-211ENST00000494333 CDKAL1Q5VV42 579 aa8.82□□□□□ -1
RIF1-211ENST00000494333 PRSS55Q6UWB4 352 aaPredicted RBP8.82□□□□□ -1
RIF1-211ENST00000494333 UNC5AQ6ZN44 842 aa8.82□□□□□ -1
RIF1-211ENST00000494333 GPR149Q86SP6 731 aa8.82□□□□□ -1
RIF1-211ENST00000494333 GPR65Q8IYL9 337 aa8.82□□□□□ -1
RIF1-211ENST00000494333 TMEM161BQ8NDZ6 487 aa8.82□□□□□ -1
RIF1-211ENST00000494333 INTS4Q96HW7 963 aaKnown RBP8.82□□□□□ -1
RIF1-211ENST00000494333 ZBTB45Q96K62 511 aaPredicted RBP8.82□□□□□ -1
RIF1-211ENST00000494333 SLC6A18Q96N87 628 aa8.82□□□□□ -1
RIF1-211ENST00000494333 ACAP3Q96P50 834 aa8.82□□□□□ -1
RIF1-211ENST00000494333 CCDC94Q9BW85 323 aaPredicted RBP8.82□□□□□ -1
RIF1-211ENST00000494333 ASPNQ9BXN1 380 aa8.82□□□□□ -1
RIF1-211ENST00000494333 CDT1Q9H211 546 aa8.82□□□□□ -1
RIF1-211ENST00000494333 SFXN1Q9H9B4 322 aa8.82□□□□□ -1
RIF1-211ENST00000494333 MAN1C1Q9NR34 630 aa8.82□□□□□ -1
RIF1-211ENST00000494333 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.82□□□□□ -1
RIF1-211ENST00000494333 TOPORSQ9NS56 1045 aaPredicted RBP8.82□□□□□ -1
RIF1-211ENST00000494333 DPP7Q9UHL4 492 aa8.82□□□□□ -1
RIF1-211ENST00000494333 SF3B1O75533 1304 aaKnown RBP eCLIP8.81□□□□□ -13e-6■■■■□ 22.9
RIF1-211ENST00000494333 CCDC195A0A1B0GUA6 201 aa8.81□□□□□ -1
RIF1-211ENST00000494333 TGM5O43548 720 aa8.81□□□□□ -1
RIF1-211ENST00000494333 TOM1L1O75674 476 aa8.81□□□□□ -1
RIF1-211ENST00000494333 RFPL2O75678 378 aa8.81□□□□□ -1
RIF1-211ENST00000494333 GLUD1P00367 558 aa8.81□□□□□ -1
RIF1-211ENST00000494333 PRNPP04156 253 aa8.81□□□□□ -1
RIF1-211ENST00000494333 KRT18P05783 430 aaKnown RBP8.81□□□□□ -1
RIF1-211ENST00000494333 MCF2P10911 925 aa8.81□□□□□ -1
RIF1-211ENST00000494333 PROZP22891 400 aa8.81□□□□□ -1
RIF1-211ENST00000494333 IGFBP6P24592 240 aaPredicted RBP8.81□□□□□ -1
RIF1-211ENST00000494333 DDIT3P35638 169 aa8.81□□□□□ -1
RIF1-211ENST00000494333 CLCNKBP51801 687 aa8.81□□□□□ -1
RIF1-211ENST00000494333 RESTQ13127 1097 aa8.81□□□□□ -1
RIF1-211ENST00000494333 PTPAQ15257 358 aa8.81□□□□□ -1
RIF1-211ENST00000494333 RTP2Q5QGT7 225 aa8.81□□□□□ -1
RIF1-211ENST00000494333 DCLRE1AQ6PJP8 1040 aa8.81□□□□□ -1
RIF1-211ENST00000494333 MPZL3Q6UWV2 235 aa8.81□□□□□ -1
RIF1-211ENST00000494333 ALKAL1Q6UXT8 129 aa8.81□□□□□ -1
RIF1-211ENST00000494333 C15orf39Q6ZRI6 1047 aa8.81□□□□□ -1
RIF1-211ENST00000494333 USP49Q70CQ1 688 aa8.81□□□□□ -1
RIF1-211ENST00000494333 HAUS6Q7Z4H7 955 aa8.81□□□□□ -1
RIF1-211ENST00000494333 GPBP1Q86WP2 473 aa8.81□□□□□ -1
RIF1-211ENST00000494333 MYCT1Q8N699 235 aa8.81□□□□□ -1
RIF1-211ENST00000494333 LNX1Q8TBB1 728 aaPredicted RBP8.81□□□□□ -1
RIF1-211ENST00000494333 LRRC15Q8TF66 581 aa8.81□□□□□ -1
RIF1-211ENST00000494333 EPSTI1Q96J88 318 aa8.81□□□□□ -1
RIF1-211ENST00000494333 HSPA12BQ96MM6 686 aa8.81□□□□□ -1
RIF1-211ENST00000494333 PPP1R10Q96QC0 940 aaKnown RBP8.81□□□□□ -1
RIF1-211ENST00000494333 REEP2Q9BRK0 252 aa8.81□□□□□ -1
RIF1-211ENST00000494333 TTPALQ9BTX7 342 aa8.81□□□□□ -1
RIF1-211ENST00000494333 CCSER1Q9C0I3 900 aa8.81□□□□□ -1
RIF1-211ENST00000494333 ZHX3Q9H4I2 956 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms