RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 CEP104O60308 925 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 LEFTY1O75610 366 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 MTA2O94776 668 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 VNN1O95497 513 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 CST3P01034 146 aaPredicted RBP6.42□□□□□ -1.38
CPSF7-213ENST00000494016 CALCAP01258 141 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 CYP1A2P05177 515 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 GLI1P08151 1106 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 MMEP08473 750 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 FOSL1P15407 271 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 CYP11B1P15538 503 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 ACO1P21399 889 aaKnown RBP6.42□□□□□ -1.38
CPSF7-213ENST00000494016 TNFRSF8P28908 595 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 NF2P35240 595 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 COPB2P35606 906 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 TCF7P36402 384 aaPredicted RBP6.42□□□□□ -1.38
CPSF7-213ENST00000494016 ACOT2P49753 483 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 LIG4P49917 911 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 GABPB1Q06547 395 aaPredicted RBP6.42□□□□□ -1.38
CPSF7-213ENST00000494016 STRN3Q13033 797 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 NOGQ13253 232 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 CAPSQ13938 189 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 PLCB4Q15147 1175 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 TERF2Q15554 542 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 ZNF792Q3KQV3 632 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 PLEKHG6Q3KR16 790 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 HSDL1Q3SXM5 330 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 ZACNQ401N2 412 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 HABP4Q5JVS0 413 aaKnown RBP6.42□□□□□ -1.38
CPSF7-213ENST00000494016 TMEM201Q5SNT2 666 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 ZBTB41Q5SVQ8 909 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 FAM160B1Q5W0V3 765 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 SLFN12LQ6IEE8 588 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 TAPT1Q6NXT6 567 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 KCNV1Q6PIU1 500 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 MAMDC4Q6UXC1 1216 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 ARMC9Q7Z3E5 817 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 PEX26Q7Z412 305 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 SLC47A2Q86VL8 602 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 NT5DC4Q86YG4 428 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 SYCE1Q8N0S2 351 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 PPM1KQ8N3J5 372 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 TOP6BLQ8N6T0 577 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 C2orf69Q8N8R5 385 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 SHCBP1Q8NEM2 672 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 AENQ8WTP8 325 aaKnown RBP6.42□□□□□ -1.38
CPSF7-213ENST00000494016 RFFLQ8WZ73 363 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 RUBCNQ92622 972 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 TAF4BQ92750 862 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 COPS5Q92905 334 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 BICD1Q96G01 975 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 NT5C1BQ96P26 610 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 MMP19Q99542 508 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 PI4K2AQ9BTU6 479 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 CCDC113Q9H0I3 377 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 THAP2Q9H0W7 228 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 MROH8Q9H579 483 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 VIPAS39Q9H9C1 493 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 PDE11AQ9HCR9 933 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 TJP2Q9UDY2 1190 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 AMFRQ9UKV5 643 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 TTC7AQ9ULT0 858 aaPredicted RBP6.42□□□□□ -1.38
CPSF7-213ENST00000494016 CORINQ9Y5Q5 1042 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 PTPRJQ12913 1337 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 MCM3APO60318 1980 aa6.42□□□□□ -1.38
CPSF7-213ENST00000494016 ZSWIM8A7E2V4 1837 aa6.41□□□□□ -1.38
CPSF7-213ENST00000494016 A0A0C4DFX4 3053 aa6.41□□□□□ -1.38
CPSF7-213ENST00000494016 FAM170AA1A519 330 aa6.41□□□□□ -1.38
CPSF7-213ENST00000494016 LRRIQ4A6NIV6 560 aa6.41□□□□□ -1.38
CPSF7-213ENST00000494016 AGPSO00116 658 aa6.41□□□□□ -1.38
CPSF7-213ENST00000494016 ABLIM1O14639 778 aa6.41□□□□□ -1.38
CPSF7-213ENST00000494016 HNRNPDLO14979 420 aaKnown RBP6.41□□□□□ -1.38
CPSF7-213ENST00000494016 POLR3GO15318 223 aaPredicted RBP6.41□□□□□ -1.38
CPSF7-213ENST00000494016 FAM189A1O60320 539 aa6.41□□□□□ -1.38
CPSF7-213ENST00000494016 MSCO60682 206 aa6.41□□□□□ -1.38
CPSF7-213ENST00000494016 ZC3H11AO75152 810 aaKnown RBP eCLIP6.41□□□□□ -1.383e-6■■□□□ 12.8
CPSF7-213ENST00000494016 SYF2O95926 243 aaKnown RBP6.41□□□□□ -1.38
CPSF7-213ENST00000494016 LDHAP00338 332 aaKnown RBP6.41□□□□□ -1.38
CPSF7-213ENST00000494016 HLA-DRAP01903 254 aa6.41□□□□□ -1.38
CPSF7-213ENST00000494016 S100BP04271 92 aaPredicted RBP6.41□□□□□ -1.38
CPSF7-213ENST00000494016 DLATP10515 647 aaKnown RBP6.41□□□□□ -1.38
CPSF7-213ENST00000494016 TXNP10599 105 aaKnown RBP6.41□□□□□ -1.38
CPSF7-213ENST00000494016 CYP2C8P10632 490 aa6.41□□□□□ -1.38
CPSF7-213ENST00000494016 ABCB4P21439 1286 aa6.41□□□□□ -1.38
CPSF7-213ENST00000494016 OAS2P29728 719 aaKnown RBP6.41□□□□□ -1.38
CPSF7-213ENST00000494016 GRIK1P39086 918 aa6.41□□□□□ -1.38
CPSF7-213ENST00000494016 USP8P40818 1118 aa6.41□□□□□ -1.38
CPSF7-213ENST00000494016 CD97P48960 835 aa6.41□□□□□ -1.38
CPSF7-213ENST00000494016 AARSP49588 968 aaKnown RBP eCLIP6.41□□□□□ -1.38
CPSF7-213ENST00000494016 DNA2P51530 1060 aa6.41□□□□□ -1.38
CPSF7-213ENST00000494016 CDR2Q01850 454 aa6.41□□□□□ -1.38
CPSF7-213ENST00000494016 POU5F1Q01860 360 aaKnown RBP6.41□□□□□ -1.38
CPSF7-213ENST00000494016 GCNT1Q02742 428 aa6.41□□□□□ -1.38
CPSF7-213ENST00000494016 SNAPC2Q13487 334 aa6.41□□□□□ -1.38
CPSF7-213ENST00000494016 TRADDQ15628 312 aa6.41□□□□□ -1.38
CPSF7-213ENST00000494016 CLEC16AQ2KHT3 1053 aa6.41□□□□□ -1.38
CPSF7-213ENST00000494016 C4orf46Q504U0 113 aa6.41□□□□□ -1.38
CPSF7-213ENST00000494016 ZFYVE27Q5T4F4 411 aa6.41□□□□□ -1.38
CPSF7-213ENST00000494016 TAF3Q5VWG9 929 aa6.41□□□□□ -1.38
CPSF7-213ENST00000494016 TDRD10Q5VZ19 366 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms