RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 MYRFLQ96LU7 910 aa12.35□□□□□ -0.43
UBA3-211ENST00000493957 SLC22A12Q96S37 553 aa12.35□□□□□ -0.43
UBA3-211ENST00000493957 TTLL2Q9BWV7 592 aa12.35□□□□□ -0.43
UBA3-211ENST00000493957 SLC46A2Q9BY10 475 aa12.35□□□□□ -0.43
UBA3-211ENST00000493957 MFRPQ9BY79 579 aa12.35□□□□□ -0.43
UBA3-211ENST00000493957 VPS16Q9H269 839 aa12.35□□□□□ -0.43
UBA3-211ENST00000493957 UBE2TQ9NPD8 197 aaPredicted RBP12.35□□□□□ -0.43
UBA3-211ENST00000493957 DMAP1Q9NPF5 467 aaPredicted RBP12.35□□□□□ -0.43
UBA3-211ENST00000493957 GDE1Q9NZC3 331 aa12.35□□□□□ -0.43
UBA3-211ENST00000493957 PCDHB4Q9Y5E5 795 aa12.35□□□□□ -0.43
UBA3-211ENST00000493957 ZFP37Q9Y6Q3 630 aaPredicted RBP12.35□□□□□ -0.43
UBA3-211ENST00000493957 ATP8B3O60423 1300 aa12.35□□□□□ -0.43
UBA3-211ENST00000493957 GTPBP10A4D1E9 387 aaKnown RBP12.34□□□□□ -0.43
UBA3-211ENST00000493957 TULP2O00295 520 aa12.34□□□□□ -0.43
UBA3-211ENST00000493957 PES1O00541 588 aaKnown RBP12.34□□□□□ -0.43
UBA3-211ENST00000493957 FAM200BP0CF97 657 aa12.34□□□□□ -0.43
UBA3-211ENST00000493957 PNMA6AP0CW24 399 aaPredicted RBP12.34□□□□□ -0.43
UBA3-211ENST00000493957 ATP1A3P13637 1013 aa12.34□□□□□ -0.43
UBA3-211ENST00000493957 ZNF18P17022 549 aa12.34□□□□□ -0.43
UBA3-211ENST00000493957 BRD2P25440 801 aaKnown RBP12.34□□□□□ -0.43
UBA3-211ENST00000493957 EEF1GP26641 437 aaKnown RBP12.34□□□□□ -0.43
UBA3-211ENST00000493957 CDC25CP30307 473 aa12.34□□□□□ -0.43
UBA3-211ENST00000493957 PGFP49763 221 aa12.34□□□□□ -0.43
UBA3-211ENST00000493957 KLK7P49862 253 aa12.34□□□□□ -0.43
UBA3-211ENST00000493957 SLC5A3P53794 718 aa12.34□□□□□ -0.43
UBA3-211ENST00000493957 TAF10Q12962 218 aa12.34□□□□□ -0.43
UBA3-211ENST00000493957 TDGQ13569 410 aa12.34□□□□□ -0.43
UBA3-211ENST00000493957 EXOC3L4Q17RC7 722 aa12.34□□□□□ -0.43
UBA3-211ENST00000493957 GOLGA7BQ2TAP0 167 aa12.34□□□□□ -0.43
UBA3-211ENST00000493957 VITQ6UXI7 678 aa12.34□□□□□ -0.43
UBA3-211ENST00000493957 DENND5BQ6ZUT9 1274 aa12.34□□□□□ -0.43
UBA3-211ENST00000493957 APTXQ7Z2E3 356 aaKnown RBP12.34□□□□□ -0.43
UBA3-211ENST00000493957 TTC30AQ86WT1 665 aa12.34□□□□□ -0.43
UBA3-211ENST00000493957 ARID3BQ8IVW6 561 aaPredicted RBP12.34□□□□□ -0.43
UBA3-211ENST00000493957 MAB21L3Q8N8X9 362 aa12.34□□□□□ -0.43
UBA3-211ENST00000493957 RBBP8NLQ8NC74 664 aaPredicted RBP12.34□□□□□ -0.43
UBA3-211ENST00000493957 RIN3Q8TB24 985 aa12.34□□□□□ -0.43
UBA3-211ENST00000493957 EDAQ92838 391 aa12.34□□□□□ -0.43
UBA3-211ENST00000493957 SMARCD2Q92925 531 aa12.34□□□□□ -0.43
UBA3-211ENST00000493957 LRRC3BQ96PB8 259 aa12.34□□□□□ -0.43
UBA3-211ENST00000493957 GCNAQ96QF7 691 aa12.34□□□□□ -0.43
UBA3-211ENST00000493957 TASP1Q9H6P5 420 aa12.34□□□□□ -0.43
UBA3-211ENST00000493957 CSNK1G1Q9HCP0 422 aa12.34□□□□□ -0.43
UBA3-211ENST00000493957 ACP6Q9NPH0 428 aa12.34□□□□□ -0.43
UBA3-211ENST00000493957 IGSF9Q9P2J2 1179 aa12.34□□□□□ -0.43
UBA3-211ENST00000493957 F5P12259 2224 aa12.34□□□□□ -0.43
UBA3-211ENST00000493957 C2orf78A6NCI8 922 aa12.33□□□□□ -0.44
UBA3-211ENST00000493957 BECN2A8MW95 431 aa12.33□□□□□ -0.44
UBA3-211ENST00000493957 FGF19O95750 216 aa12.33□□□□□ -0.44
UBA3-211ENST00000493957 PDGFBP01127 241 aaPredicted RBP12.33□□□□□ -0.44
UBA3-211ENST00000493957 CFHP08603 1231 aa12.33□□□□□ -0.44
UBA3-211ENST00000493957 ALADP13716 330 aa12.33□□□□□ -0.44
UBA3-211ENST00000493957 CD19P15391 556 aa12.33□□□□□ -0.44
UBA3-211ENST00000493957 ZNF132P52740 706 aa12.33□□□□□ -0.44
UBA3-211ENST00000493957 COPB1P53618 953 aaKnown RBP12.33□□□□□ -0.44
UBA3-211ENST00000493957 YWHAEP62258 255 aaKnown RBP12.33□□□□□ -0.44
UBA3-211ENST00000493957 GCNT1Q02742 428 aa12.33□□□□□ -0.44
UBA3-211ENST00000493957 NFKBIBQ15653 356 aa12.33□□□□□ -0.44
UBA3-211ENST00000493957 ARHGAP44Q17R89 818 aa12.33□□□□□ -0.44
UBA3-211ENST00000493957 ZSCAN23Q3MJ62 389 aa12.33□□□□□ -0.44
UBA3-211ENST00000493957 ARHGAP15Q53QZ3 475 aa12.33□□□□□ -0.44
UBA3-211ENST00000493957 ARHGAP17Q68EM7 881 aa12.33□□□□□ -0.44
UBA3-211ENST00000493957 MTSS1LQ765P7 747 aa12.33□□□□□ -0.44
UBA3-211ENST00000493957 NUP93Q8N1F7 819 aa12.33□□□□□ -0.44
UBA3-211ENST00000493957 ASIC4Q96FT7 647 aa12.33□□□□□ -0.44
UBA3-211ENST00000493957 CYP2S1Q96SQ9 504 aa12.33□□□□□ -0.44
UBA3-211ENST00000493957 LSM14BQ9BX40 385 aaKnown RBP12.33□□□□□ -0.44
UBA3-211ENST00000493957 TRPC7Q9HCX4 862 aa12.33□□□□□ -0.44
UBA3-211ENST00000493957 GMIPQ9P107 970 aa12.33□□□□□ -0.44
UBA3-211ENST00000493957 APEX2Q9UBZ4 518 aa12.33□□□□□ -0.44
UBA3-211ENST00000493957 DUSP12Q9UNI6 340 aa12.33□□□□□ -0.44
UBA3-211ENST00000493957 CCL26Q9Y258 94 aa12.33□□□□□ -0.44
UBA3-211ENST00000493957 HEPACAM2A8MVW5 462 aa12.32□□□□□ -0.44
UBA3-211ENST00000493957 O00370 1275 aa12.32□□□□□ -0.44
UBA3-211ENST00000493957 ECI2O75521 394 aa12.32□□□□□ -0.44
UBA3-211ENST00000493957 NPR3P17342 541 aa12.32□□□□□ -0.44
UBA3-211ENST00000493957 PTMSP20962 102 aa12.32□□□□□ -0.44
UBA3-211ENST00000493957 GPC5P78333 572 aa12.32□□□□□ -0.44
UBA3-211ENST00000493957 IQCB1Q15051 598 aa12.32□□□□□ -0.44
UBA3-211ENST00000493957 SGO2Q562F6 1265 aa12.32□□□□□ -0.44
UBA3-211ENST00000493957 TRIM67Q6ZTA4 783 aa12.32□□□□□ -0.44
UBA3-211ENST00000493957 TTC39CQ8N584 583 aa12.32□□□□□ -0.44
UBA3-211ENST00000493957 UBA3Q8TBC4 463 aa12.32□□□□□ -0.44
UBA3-211ENST00000493957 MRPS31Q92665 395 aaKnown RBP12.32□□□□□ -0.44
UBA3-211ENST00000493957 ELSPBP1Q96BH3 223 aa12.32□□□□□ -0.44
UBA3-211ENST00000493957 CEP295NLQ96MC4 621 aa12.32□□□□□ -0.44
UBA3-211ENST00000493957 BPIFA3Q9BQP9 254 aa12.32□□□□□ -0.44
UBA3-211ENST00000493957 DUSP16Q9BY84 665 aa12.32□□□□□ -0.44
UBA3-211ENST00000493957 FAM124BQ9H5Z6 455 aaPredicted RBP12.32□□□□□ -0.44
UBA3-211ENST00000493957 TRPV4Q9HBA0 871 aa12.32□□□□□ -0.44
UBA3-211ENST00000493957 ZFP14Q9HCL3 533 aa12.32□□□□□ -0.44
UBA3-211ENST00000493957 IL37Q9NZH6 218 aa12.32□□□□□ -0.44
UBA3-211ENST00000493957 UXTQ9UBK9 157 aaPredicted RBP12.32□□□□□ -0.44
UBA3-211ENST00000493957 LIMA1Q9UHB6 759 aaKnown RBP12.32□□□□□ -0.44
UBA3-211ENST00000493957 TSPAN16Q9UKR8 245 aa12.32□□□□□ -0.44
UBA3-211ENST00000493957 CNTN6Q9UQ52 1028 aa12.32□□□□□ -0.44
UBA3-211ENST00000493957 FHOD1Q9Y613 1164 aa12.32□□□□□ -0.44
UBA3-211ENST00000493957 ZNF840PA6NDX5 716 aa12.31□□□□□ -0.44
UBA3-211ENST00000493957 TMEM221A6NGB7 291 aa12.31□□□□□ -0.44
UBA3-211ENST00000493957 M0R296 226 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms