RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 HOXC12P31275 282 aa7.13□□□□□ -1.27
TRA2B-216ENST00000493864 THPOP40225 353 aa7.13□□□□□ -1.27
TRA2B-216ENST00000493864 CRYBB1P53674 252 aaPredicted RBP7.13□□□□□ -1.27
TRA2B-216ENST00000493864 MRPS6P82932 125 aaKnown RBP7.13□□□□□ -1.27
TRA2B-216ENST00000493864 CDC42EP1Q00587 391 aa7.13□□□□□ -1.27
TRA2B-216ENST00000493864 MBTD1Q05BQ5 628 aa7.13□□□□□ -1.27
TRA2B-216ENST00000493864 LRRC63Q05C16 580 aa7.13□□□□□ -1.27
TRA2B-216ENST00000493864 STRN3Q13033 797 aa7.13□□□□□ -1.27
TRA2B-216ENST00000493864 ADAM9Q13443 819 aa7.13□□□□□ -1.27
TRA2B-216ENST00000493864 YOD1Q5VVQ6 348 aaPredicted RBP7.13□□□□□ -1.27
TRA2B-216ENST00000493864 TAF2Q6P1X5 1199 aa7.13□□□□□ -1.27
TRA2B-216ENST00000493864 SLC39A4Q6P5W5 647 aa7.13□□□□□ -1.27
TRA2B-216ENST00000493864 SRGAP1Q7Z6B7 1085 aa7.13□□□□□ -1.27
TRA2B-216ENST00000493864 UBE2Q1Q7Z7E8 422 aa7.13□□□□□ -1.27
TRA2B-216ENST00000493864 RPAINQ86UA6 219 aa7.13□□□□□ -1.27
TRA2B-216ENST00000493864 ZNF410Q86VK4 478 aa7.13□□□□□ -1.27
TRA2B-216ENST00000493864 ZBTB8OSQ8IWT0 167 aa7.13□□□□□ -1.27
TRA2B-216ENST00000493864 CSGALNACT2Q8N6G5 542 aa7.13□□□□□ -1.27
TRA2B-216ENST00000493864 LINC01599Q8WXQ3 324 aa7.13□□□□□ -1.27
TRA2B-216ENST00000493864 KCNN1Q92952 543 aa7.13□□□□□ -1.27
TRA2B-216ENST00000493864 HVCN1Q96D96 273 aa7.13□□□□□ -1.27
TRA2B-216ENST00000493864 SCLT1Q96NL6 688 aa7.13□□□□□ -1.27
TRA2B-216ENST00000493864 PTCHD1Q96NR3 888 aa7.13□□□□□ -1.27
TRA2B-216ENST00000493864 ACO2Q99798 780 aaKnown RBP7.13□□□□□ -1.27
TRA2B-216ENST00000493864 TSG101Q99816 390 aa7.13□□□□□ -1.27
TRA2B-216ENST00000493864 IER2Q9BTL4 223 aa7.13□□□□□ -1.27
TRA2B-216ENST00000493864 CELF4Q9BZC1 486 aaKnown RBP7.13□□□□□ -1.27
TRA2B-216ENST00000493864 GCOM2Q9BZD3 368 aaPredicted RBP7.13□□□□□ -1.27
TRA2B-216ENST00000493864 INO80BQ9C086 356 aaPredicted RBP7.13□□□□□ -1.27
TRA2B-216ENST00000493864 C2orf40Q9H1Z8 148 aa7.13□□□□□ -1.27
TRA2B-216ENST00000493864 PCIF1Q9H4Z3 704 aa7.13□□□□□ -1.27
TRA2B-216ENST00000493864 TMEM206Q9H813 350 aa7.13□□□□□ -1.27
TRA2B-216ENST00000493864 AGPAT3Q9NRZ7 376 aa7.13□□□□□ -1.27
TRA2B-216ENST00000493864 TYW1Q9NV66 732 aaKnown RBP7.13□□□□□ -1.27
TRA2B-216ENST00000493864 C19orf73Q9NVV2 129 aa7.13□□□□□ -1.27
TRA2B-216ENST00000493864 DMAC2Q9NW81 257 aa7.13□□□□□ -1.27
TRA2B-216ENST00000493864 EXOC7Q9UPT5 735 aa7.13□□□□□ -1.27
TRA2B-216ENST00000493864 TRAF3IP3Q9Y228 551 aa7.13□□□□□ -1.27
TRA2B-216ENST00000493864 CDY2AQ9Y6F7 541 aa7.13□□□□□ -1.27
TRA2B-216ENST00000493864 PRODHO43272 600 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 CALUO43852 315 aaPredicted RBP7.12□□□□□ -1.27
TRA2B-216ENST00000493864 PQBP1O60828 265 aaKnown RBP7.12□□□□□ -1.27
TRA2B-216ENST00000493864 CD4P01730 458 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 PIGRP01833 764 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 NR3C1P04150 777 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 ATP1A3P13637 1013 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 ZNF18P17022 549 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 SCP2P22307 547 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 ADSSP30520 456 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 ABCD1P33897 745 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 GDNFP39905 211 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 CASP4P49662 377 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 CYP2J2P51589 502 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 GFRA1P56159 465 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 ERVFC1P60507 584 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 FKBP3Q00688 224 aaKnown RBP7.12□□□□□ -1.27
TRA2B-216ENST00000493864 TLE2Q04725 743 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 MGAT3Q09327 533 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 SNX17Q15036 470 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 MAPK6Q16659 721 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 FAM187BQ17R55 369 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 PRSS53Q2L4Q9 553 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 EDRF1Q3B7T1 1238 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 ZNF618Q5T7W0 954 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 FOXR2Q6PJQ5 311 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 LRRC55Q6ZSA7 311 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 FILIP1Q7Z7B0 1213 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 RSPH3Q86UC2 560 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 CDR2LQ86X02 465 aaPredicted RBP7.12□□□□□ -1.27
TRA2B-216ENST00000493864 FAM126BQ8IXS8 530 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 ZC3H3Q8IXZ2 948 aaKnown RBP7.12□□□□□ -1.27
TRA2B-216ENST00000493864 ZSWIM2Q8NEG5 633 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 PDZD8Q8NEN9 1154 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 BICD1Q96G01 975 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 CPB2Q96IY4 423 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 CCDC140Q96MF4 163 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 CDC6Q99741 560 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 CBWD1Q9BRT8 395 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 SEZ6LQ9BYH1 1024 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 NFKBIZQ9BYH8 718 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 HAPLN2Q9GZV7 340 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 C11orf49Q9H6J7 331 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 GRPEL1Q9HAV7 217 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 PRMT7Q9NVM4 692 aaPredicted RBP7.12□□□□□ -1.27
TRA2B-216ENST00000493864 CLEC1BQ9P126 229 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 TNFRSF10DQ9UBN6 386 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 NOC2LQ9Y3T9 749 aaKnown RBP7.12□□□□□ -1.27
TRA2B-216ENST00000493864 TRPV2Q9Y5S1 764 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 STYXL1Q9Y6J8 313 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 LTBP2Q14767 1821 aa7.12□□□□□ -1.27
TRA2B-216ENST00000493864 PHLPP2Q6ZVD8 1323 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 SZT2Q5T011 3432 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 A0A0B4J269 797 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 GOLGA8IPA6NC78 632 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 GOLGA8JA6NMD2 632 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 ABLIM1O14639 778 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 HNRNPDLO14979 420 aaKnown RBP7.11□□□□□ -1.27
TRA2B-216ENST00000493864 CETN3O15182 167 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 TSPAN1O60635 241 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 AKAP3O75969 853 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms