RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 PHACTR2O75167 634 aa12.99□□□□□ -0.33
UPF3A-210ENST00000493727 C8AP07357 584 aa12.99□□□□□ -0.33
UPF3A-210ENST00000493727 DCNP07585 359 aaKnown RBP12.99□□□□□ -0.33
UPF3A-210ENST00000493727 SP9P0CG40 484 aa12.99□□□□□ -0.33
UPF3A-210ENST00000493727 GLULP15104 373 aa12.99□□□□□ -0.33
UPF3A-210ENST00000493727 GTF2H1P32780 548 aa12.99□□□□□ -0.33
UPF3A-210ENST00000493727 FMO5P49326 533 aa12.99□□□□□ -0.33
UPF3A-210ENST00000493727 AP3M2P53677 418 aa12.99□□□□□ -0.33
UPF3A-210ENST00000493727 HTR4Q13639 388 aa12.99□□□□□ -0.33
UPF3A-210ENST00000493727 RAB33AQ14088 237 aa12.99□□□□□ -0.33
UPF3A-210ENST00000493727 DUOXA2Q1HG44 320 aa12.99□□□□□ -0.33
UPF3A-210ENST00000493727 SWI5Q1ZZU3 235 aa12.99□□□□□ -0.33
UPF3A-210ENST00000493727 SLC10A6Q3KNW5 377 aa12.99□□□□□ -0.33
UPF3A-210ENST00000493727 GLRA4Q5JXX5 417 aa12.99□□□□□ -0.33
UPF3A-210ENST00000493727 JADE1Q6IE81 842 aa12.99□□□□□ -0.33
UPF3A-210ENST00000493727 ZC3H14Q6PJT7 736 aaKnown RBP12.99□□□□□ -0.33
UPF3A-210ENST00000493727 MTSS1LQ765P7 747 aa12.99□□□□□ -0.33
UPF3A-210ENST00000493727 DGLUCYQ7Z3D6 616 aa12.99□□□□□ -0.33
UPF3A-210ENST00000493727 KIAA2013Q8IYS2 634 aa12.99□□□□□ -0.33
UPF3A-210ENST00000493727 C1orf216Q8TAB5 229 aa12.99□□□□□ -0.33
UPF3A-210ENST00000493727 CACTINQ8WUQ7 758 aaKnown RBP12.99□□□□□ -0.33
UPF3A-210ENST00000493727 ZNF837Q96EG3 531 aaPredicted RBP12.99□□□□□ -0.33
UPF3A-210ENST00000493727 NAP1L5Q96NT1 182 aaPredicted RBP12.99□□□□□ -0.33
UPF3A-210ENST00000493727 TMEM8AQ9HCN3 771 aa12.99□□□□□ -0.33
UPF3A-210ENST00000493727 SLC2A4RGQ9NR83 387 aa12.99□□□□□ -0.33
UPF3A-210ENST00000493727 ZDHHC3Q9NYG2 299 aa12.99□□□□□ -0.33
UPF3A-210ENST00000493727 MTRRQ9UBK8 725 aa12.99□□□□□ -0.33
UPF3A-210ENST00000493727 CDH7Q9ULB5 785 aa12.99□□□□□ -0.33
UPF3A-210ENST00000493727 NOTCH4Q99466 2003 aa12.99□□□□□ -0.33
UPF3A-210ENST00000493727 SMIM28A0A1B0GU29 152 aa12.98□□□□□ -0.33
UPF3A-210ENST00000493727 TTC26A0AVF1 554 aa12.98□□□□□ -0.33
UPF3A-210ENST00000493727 SERTM1A2A2V5 107 aa12.98□□□□□ -0.33
UPF3A-210ENST00000493727 LRRC10BA6NIK2 292 aa12.98□□□□□ -0.33
UPF3A-210ENST00000493727 NFICP08651 508 aa12.98□□□□□ -0.33
UPF3A-210ENST00000493727 WEE1P30291 646 aa12.98□□□□□ -0.33
UPF3A-210ENST00000493727 PIK3CAP42336 1068 aa12.98□□□□□ -0.33
UPF3A-210ENST00000493727 ZNF75DP51815 510 aa12.98□□□□□ -0.33
UPF3A-210ENST00000493727 PUM1Q14671 1186 aaKnown RBP eCLIP12.98□□□□□ -0.332e-10■□□□□ 9
UPF3A-210ENST00000493727 UPP1Q16831 310 aa12.98□□□□□ -0.33
UPF3A-210ENST00000493727 XKR4Q5GH76 650 aa12.98□□□□□ -0.33
UPF3A-210ENST00000493727 MIIPQ5JXC2 388 aa12.98□□□□□ -0.33
UPF3A-210ENST00000493727 KRT39Q6A163 491 aa12.98□□□□□ -0.33
UPF3A-210ENST00000493727 GBP6Q6ZN66 633 aa12.98□□□□□ -0.33
UPF3A-210ENST00000493727 SV2AQ7L0J3 742 aa12.98□□□□□ -0.33
UPF3A-210ENST00000493727 GRASPQ7Z6J2 395 aaPredicted RBP12.98□□□□□ -0.33
UPF3A-210ENST00000493727 C1orf210Q8IVY1 113 aa12.98□□□□□ -0.33
UPF3A-210ENST00000493727 MAML2Q8IZL2 1156 aaPredicted RBP12.98□□□□□ -0.33
UPF3A-210ENST00000493727 SUMF1Q8NBK3 374 aa12.98□□□□□ -0.33
UPF3A-210ENST00000493727 BEST2Q8NFU1 509 aa12.98□□□□□ -0.33
UPF3A-210ENST00000493727 PJA1Q8NG27 643 aa12.98□□□□□ -0.33
UPF3A-210ENST00000493727 MTMR12Q9C0I1 747 aa12.98□□□□□ -0.33
UPF3A-210ENST00000493727 INTS13Q9NVM9 706 aa12.98□□□□□ -0.33
UPF3A-210ENST00000493727 CNTN3Q9P232 1028 aa12.98□□□□□ -0.33
UPF3A-210ENST00000493727 DERAQ9Y315 318 aa12.98□□□□□ -0.33
UPF3A-210ENST00000493727 C2CD2Q9Y426 696 aa12.98□□□□□ -0.33
UPF3A-210ENST00000493727 BACE2Q9Y5Z0 518 aa12.98□□□□□ -0.33
UPF3A-210ENST00000493727 CFAP47Q6ZTR5 3102 aa12.97□□□□□ -0.33
UPF3A-210ENST00000493727 CDC14CA4D256 554 aa12.97□□□□□ -0.33
UPF3A-210ENST00000493727 P4HA2O15460 535 aa12.97□□□□□ -0.33
UPF3A-210ENST00000493727 AP5Z1O43299 807 aa12.97□□□□□ -0.33
UPF3A-210ENST00000493727 ADCY5O95622 1261 aa12.97□□□□□ -0.33
UPF3A-210ENST00000493727 OR1D2P34982 312 aa12.97□□□□□ -0.33
UPF3A-210ENST00000493727 CLCNKBP51801 687 aa12.97□□□□□ -0.33
UPF3A-210ENST00000493727 PPP3CAQ08209 521 aa12.97□□□□□ -0.33
UPF3A-210ENST00000493727 TRPC3Q13507 836 aa12.97□□□□□ -0.33
UPF3A-210ENST00000493727 CBWD6Q4V339 395 aa12.97□□□□□ -0.33
UPF3A-210ENST00000493727 CBWD3Q5JTY5 395 aa12.97□□□□□ -0.33
UPF3A-210ENST00000493727 CBWD5Q5RIA9 395 aa12.97□□□□□ -0.33
UPF3A-210ENST00000493727 APTXQ7Z2E3 356 aaKnown RBP12.97□□□□□ -0.33
UPF3A-210ENST00000493727 NT5DC4Q86YG4 428 aa12.97□□□□□ -0.33
UPF3A-210ENST00000493727 DRC7Q8IY82 874 aa12.97□□□□□ -0.33
UPF3A-210ENST00000493727 EFCAB13Q8IY85 973 aa12.97□□□□□ -0.33
UPF3A-210ENST00000493727 CCDC150Q8NCX0 1101 aa12.97□□□□□ -0.33
UPF3A-210ENST00000493727 SLC7A14Q8TBB6 771 aa12.97□□□□□ -0.33
UPF3A-210ENST00000493727 RUBCNQ92622 972 aa12.97□□□□□ -0.33
UPF3A-210ENST00000493727 SHDQ96IW2 340 aa12.97□□□□□ -0.33
UPF3A-210ENST00000493727 C2orf49Q9BVC5 232 aaPredicted RBP12.97□□□□□ -0.33
UPF3A-210ENST00000493727 CRISPLD1Q9H336 500 aa12.97□□□□□ -0.33
UPF3A-210ENST00000493727 RUBCNLQ9H714 662 aa12.97□□□□□ -0.33
UPF3A-210ENST00000493727 GCNT4Q9P109 453 aa12.97□□□□□ -0.33
UPF3A-210ENST00000493727 UBQLN1Q9UMX0 589 aaKnown RBP12.97□□□□□ -0.33
UPF3A-210ENST00000493727 POLIQ9UNA4 740 aa12.97□□□□□ -0.33
UPF3A-210ENST00000493727 SIT1Q9Y3P8 196 aa12.97□□□□□ -0.33
UPF3A-210ENST00000493727 NUMBLQ9Y6R0 609 aa12.97□□□□□ -0.33
UPF3A-210ENST00000493727 CHD8Q9HCK8 2581 aa12.97□□□□□ -0.33
UPF3A-210ENST00000493727 PTPRJQ12913 1337 aa12.96□□□□□ -0.33
UPF3A-210ENST00000493727 H7C4K7 107 aa12.96□□□□□ -0.33
UPF3A-210ENST00000493727 SYN3O14994 580 aa12.96□□□□□ -0.33
UPF3A-210ENST00000493727 CCL16O15467 120 aa12.96□□□□□ -0.33
UPF3A-210ENST00000493727 MEFVO15553 781 aaPredicted RBP12.96□□□□□ -0.33
UPF3A-210ENST00000493727 TEX33O43247 280 aa12.96□□□□□ -0.33
UPF3A-210ENST00000493727 KRT19P08727 400 aa12.96□□□□□ -0.33
UPF3A-210ENST00000493727 KCNE1P15382 129 aa12.96□□□□□ -0.33
UPF3A-210ENST00000493727 TKTP29401 623 aaKnown RBP12.96□□□□□ -0.33
UPF3A-210ENST00000493727 RPL9P32969 192 aaKnown RBP12.96□□□□□ -0.33
UPF3A-210ENST00000493727 STARD6P59095 220 aa12.96□□□□□ -0.33
UPF3A-210ENST00000493727 NR1I3Q14994 352 aa12.96□□□□□ -0.33
UPF3A-210ENST00000493727 SYCP1Q15431 976 aa12.96□□□□□ -0.33
UPF3A-210ENST00000493727 EXOC3L4Q17RC7 722 aa12.96□□□□□ -0.33
UPF3A-210ENST00000493727 C1orf220Q5T0J3 134 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms