RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 PTGISQ16647 500 aa11.3□□□□□ -0.6
PHACTR4-204ENST00000493669 CCDC14Q49A88 953 aa11.3□□□□□ -0.6
PHACTR4-204ENST00000493669 KCNT1Q5JUK3 1230 aa11.3□□□□□ -0.6
PHACTR4-204ENST00000493669 TRNP1Q6NT89 227 aa11.3□□□□□ -0.6
PHACTR4-204ENST00000493669 CYP4V2Q6ZWL3 525 aaPredicted RBP11.3□□□□□ -0.6
PHACTR4-204ENST00000493669 SLC26A9Q7LBE3 791 aa11.3□□□□□ -0.6
PHACTR4-204ENST00000493669 RFX6Q8HWS3 928 aa11.3□□□□□ -0.6
PHACTR4-204ENST00000493669 BCAS4Q8TDM0 211 aa11.3□□□□□ -0.6
PHACTR4-204ENST00000493669 PPP1R13LQ8WUF5 828 aa11.3□□□□□ -0.6
PHACTR4-204ENST00000493669 PPP1R10Q96QC0 940 aaKnown RBP11.3□□□□□ -0.6
PHACTR4-204ENST00000493669 RNF39Q9H2S5 420 aa11.3□□□□□ -0.6
PHACTR4-204ENST00000493669 ADAM7Q9H2U9 754 aa11.3□□□□□ -0.6
PHACTR4-204ENST00000493669 NINJ2Q9NZG7 142 aa11.3□□□□□ -0.6
PHACTR4-204ENST00000493669 KLK14Q9P0G3 267 aa11.3□□□□□ -0.6
PHACTR4-204ENST00000493669 PCSK1NQ9UHG2 260 aa11.3□□□□□ -0.6
PHACTR4-204ENST00000493669 CDY2AQ9Y6F7 541 aa11.3□□□□□ -0.6
PHACTR4-204ENST00000493669 SGK1O00141 431 aa11.3□□□□□ -0.6
PHACTR4-204ENST00000493669 MDM4O15151 490 aa11.3□□□□□ -0.6
PHACTR4-204ENST00000493669 PAPSS1O43252 624 aaPredicted RBP11.3□□□□□ -0.6
PHACTR4-204ENST00000493669 CTGFP29279 349 aa11.3□□□□□ -0.6
PHACTR4-204ENST00000493669 RGS7P49802 495 aa11.3□□□□□ -0.6
PHACTR4-204ENST00000493669 TAOK1Q7L7X3 1001 aa11.3□□□□□ -0.6
PHACTR4-204ENST00000493669 ADGRF2Q8IZF7 708 aa11.3□□□□□ -0.6
PHACTR4-204ENST00000493669 PEBP4Q96S96 227 aa11.3□□□□□ -0.6
PHACTR4-204ENST00000493669 CCDC77Q9BR77 488 aa11.3□□□□□ -0.6
PHACTR4-204ENST00000493669 MYADML2A6NDP7 307 aa11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 MCF2LO15068 1137 aa11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 SPTLC1O15269 473 aa11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 SEPT4O43236 478 aa11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 FGFR1P11362 822 aa11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 MMP13P45452 471 aa11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 LILRA4P59901 499 aa11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 SOX4Q06945 474 aaPredicted RBP11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 GPS1Q13098 491 aa11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 AUHQ13825 339 aaKnown RBP11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 STAT4Q14765 748 aa11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 NBPF20Q3BBV1 942 aa11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 RNASEH2BQ5TBB1 312 aaKnown RBP11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 SERINC5Q86VE9 423 aa11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 HSPH1Q92598 858 aa11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 MAK16Q9BXY0 300 aaKnown RBP11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 DPEP3Q9H4B8 488 aa11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 RARBP10826 455 aa11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 CDH6P55285 790 aa11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 RIBC1Q8N443 379 aaPredicted RBP11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 TRIB2Q92519 343 aa11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 KHSRPQ92945 711 aaKnown RBP eCLIP11.29□□□□□ -0.69e-7■□□□□ 10.4
PHACTR4-204ENST00000493669 PIWIL1Q96J94 861 aaKnown RBP11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 RBM15Q96T37 977 aaKnown RBP eCLIP11.29□□□□□ -0.61e-7■■■■■ 30
PHACTR4-204ENST00000493669 HNRNPABQ99729 332 aaKnown RBP11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 TMEM121Q9BTD3 319 aa11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 DDX23Q9BUQ8 820 aaKnown RBP11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 CALN1Q9BXU9 219 aa11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 SENP6Q9GZR1 1112 aaPredicted RBP11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 PPCSQ9HAB8 311 aa11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 TLDC2A0PJX2 215 aa11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 TULP2O00295 520 aa11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 PTGESO14684 152 aa11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 XPO1O14980 1071 aaKnown RBP11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 ACSL3O95573 720 aa11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 STIP1P31948 543 aaKnown RBP11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 PSMC4P43686 418 aa11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 SLC8A3P57103 927 aa11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 DPYSL3Q14195 570 aa11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 NOMO1Q15155 1222 aa11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 SPATS2Q86XZ4 545 aaKnown RBP11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 ARRDC4Q8NCT1 418 aa11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 EPS8L3Q8TE67 593 aaKnown RBP11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 FAM172AQ8WUF8 416 aa11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 RSAD2Q8WXG1 361 aa11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 HAUS1Q96CS2 278 aa11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 CFAP57Q96MR6 1250 aa11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 C11orf84Q9BUA3 381 aaPredicted RBP11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 LRRC4CQ9HCJ2 640 aa11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 FAM105AQ9NUU6 356 aa11.29□□□□□ -0.6
PHACTR4-204ENST00000493669 CASP8AP2Q9UKL3 1982 aa11.28□□□□□ -0.6
PHACTR4-204ENST00000493669 DCDC2CA8MYV0 355 aa11.28□□□□□ -0.6
PHACTR4-204ENST00000493669 CD48P09326 243 aa11.28□□□□□ -0.6
PHACTR4-204ENST00000493669 TGM2P21980 687 aa11.28□□□□□ -0.6
PHACTR4-204ENST00000493669 MAGEA4P43358 317 aa11.28□□□□□ -0.6
PHACTR4-204ENST00000493669 DYNLT1P63172 113 aa11.28□□□□□ -0.6
PHACTR4-204ENST00000493669 KRT81Q14533 505 aa11.28□□□□□ -0.6
PHACTR4-204ENST00000493669 KYNUQ16719 465 aa11.28□□□□□ -0.6
PHACTR4-204ENST00000493669 CCDC142Q17RM4 750 aa11.28□□□□□ -0.6
PHACTR4-204ENST00000493669 C15orf59Q2T9L4 293 aaPredicted RBP11.28□□□□□ -0.6
PHACTR4-204ENST00000493669 PPIL6Q8IXY8 311 aa11.28□□□□□ -0.6
PHACTR4-204ENST00000493669 GLIS1Q8NBF1 620 aa11.28□□□□□ -0.6
PHACTR4-204ENST00000493669 CENPIQ92674 756 aaPredicted RBP11.28□□□□□ -0.6
PHACTR4-204ENST00000493669 RNF157Q96PX1 679 aa11.28□□□□□ -0.6
PHACTR4-204ENST00000493669 ZNF670Q9BS34 389 aa11.28□□□□□ -0.6
PHACTR4-204ENST00000493669 LGALS13Q9UHV8 139 aa11.28□□□□□ -0.6
PHACTR4-204ENST00000493669 GIT1Q9Y2X7 761 aa11.28□□□□□ -0.6
PHACTR4-204ENST00000493669 FARP1Q9Y4F1 1045 aaPredicted RBP11.28□□□□□ -0.6
PHACTR4-204ENST00000493669 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.28□□□□□ -0.6
PHACTR4-204ENST00000493669 CFAP69A5D8W1 941 aa11.28□□□□□ -0.6
PHACTR4-204ENST00000493669 NDUFAB1O14561 156 aa11.28□□□□□ -0.6
PHACTR4-204ENST00000493669 GPR182O15218 404 aa11.28□□□□□ -0.6
PHACTR4-204ENST00000493669 EIF3EP60228 445 aaKnown RBP11.28□□□□□ -0.6
PHACTR4-204ENST00000493669 MGAT3Q09327 533 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms