RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 ARHGAP10A1A4S6 786 aa12.19□□□□□ -0.46
HDAC4-210ENST00000493582 TRIM43BA6NCK2 446 aa12.19□□□□□ -0.46
HDAC4-210ENST00000493582 C6orf229H3BNL8 230 aa12.19□□□□□ -0.46
HDAC4-210ENST00000493582 KLF11O14901 512 aa12.19□□□□□ -0.46
HDAC4-210ENST00000493582 ADCY3O60266 1144 aa12.19□□□□□ -0.46
HDAC4-210ENST00000493582 CCNT2O60583 730 aaKnown RBP12.19□□□□□ -0.46
HDAC4-210ENST00000493582 ZMPSTE24O75844 475 aa12.19□□□□□ -0.46
HDAC4-210ENST00000493582 POLR2MP0CAP2 368 aa12.19□□□□□ -0.46
HDAC4-210ENST00000493582 RPL7AP62424 266 aaKnown RBP12.19□□□□□ -0.46
HDAC4-210ENST00000493582 UBXN2AP68543 259 aa12.19□□□□□ -0.46
HDAC4-210ENST00000493582 BTG3Q14201 252 aaPredicted RBP12.19□□□□□ -0.46
HDAC4-210ENST00000493582 LPIN1Q14693 890 aa12.19□□□□□ -0.46
HDAC4-210ENST00000493582 ANO5Q75V66 913 aa12.19□□□□□ -0.46
HDAC4-210ENST00000493582 CRLF3Q8IUI8 442 aa12.19□□□□□ -0.46
HDAC4-210ENST00000493582 ZNF180Q9UJW8 692 aa12.19□□□□□ -0.46
HDAC4-210ENST00000493582 ZNFX1Q9P2E3 1918 aaKnown RBP12.19□□□□□ -0.46
HDAC4-210ENST00000493582 LOC102724428A0A0B4J2F2 783 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 TCRBV9S1A1TA0A576 114 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 TRIM49D1C9J1S8 452 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 DENRO43583 198 aaKnown RBP12.18□□□□□ -0.46
HDAC4-210ENST00000493582 CRTAMO95727 393 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 IL1BP01584 269 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 CDH2P19022 906 aaPredicted RBP12.18□□□□□ -0.46
HDAC4-210ENST00000493582 SIK1P57059 783 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 IRX4P78413 519 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 KRT81Q14533 505 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 SHROOM1Q2M3G4 852 aaPredicted RBP12.18□□□□□ -0.46
HDAC4-210ENST00000493582 KRT39Q6A163 491 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 NUDCD3Q8IVD9 361 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 DEFB107AQ8IZN7 70 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 SMYD1Q8NB12 490 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 MAF1Q9H063 256 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 TUFT1Q9NNX1 390 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 STK24Q9Y6E0 443 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 SDR42E2A6NKP2 422 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 IPO5O00410 1097 aaKnown RBP12.18□□□□□ -0.46
HDAC4-210ENST00000493582 TMEM63AO94886 807 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 TFPTP0C1Z6 253 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 MLH1P40692 756 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 PHEXP78562 749 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 GABPAQ06546 454 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 PGM2L1Q6PCE3 622 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 AMIGO2Q86SJ2 522 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 CTAGE3PQ8IX95 158 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 PPIL6Q8IXY8 311 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 WDR18Q9BV38 432 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 OXCT2Q9BYC2 517 aaPredicted RBP12.18□□□□□ -0.46
HDAC4-210ENST00000493582 MRPS26Q9BYN8 205 aaKnown RBP12.18□□□□□ -0.46
HDAC4-210ENST00000493582 PCDH9Q9HC56 1237 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 FAIMQ9NVQ4 179 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 DRG1Q9Y295 367 aaKnown RBP12.18□□□□□ -0.46
HDAC4-210ENST00000493582 WDR37Q9Y2I8 494 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 HBS1LQ9Y450 684 aaKnown RBP12.18□□□□□ -0.46
HDAC4-210ENST00000493582 AP4B1Q9Y6B7 739 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 CEPT1Q9Y6K0 416 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 AK5Q9Y6K8 562 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 NFASCO94856 1347 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 CD48P09326 243 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 AOC1P19801 751 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 ELK3P41970 407 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 NFIXQ14938 502 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 PDK1Q15118 436 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 C6orf52Q5T4I8 152 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 OGFRL1Q5TC84 451 aaPredicted RBP12.18□□□□□ -0.46
HDAC4-210ENST00000493582 ATG16L1Q676U5 607 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 RCOR2Q8IZ40 523 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 NAT8LQ8N9F0 302 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 TMIGD2Q96BF3 282 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 MAML3Q96JK9 1138 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 ZFRQ96KR1 1074 aaKnown RBP12.18□□□□□ -0.46
HDAC4-210ENST00000493582 NACC1Q96RE7 527 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 TUT1Q9H6E5 874 aaKnown RBP12.18□□□□□ -0.46
HDAC4-210ENST00000493582 XPO7Q9UIA9 1087 aaKnown RBP12.18□□□□□ -0.46
HDAC4-210ENST00000493582 DOLKQ9UPQ8 538 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 PLLPQ9Y342 182 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 PPME1Q9Y570 386 aa12.18□□□□□ -0.46
HDAC4-210ENST00000493582 STRCP1A6NGW2 1772 aa12.17□□□□□ -0.46
HDAC4-210ENST00000493582 IGLV3-22A0A075B6J6 115 aa12.17□□□□□ -0.46
HDAC4-210ENST00000493582 ARHGEF35A5YM69 484 aa12.17□□□□□ -0.46
HDAC4-210ENST00000493582 E9PBE3 544 aa12.17□□□□□ -0.46
HDAC4-210ENST00000493582 CASQ2O14958 399 aaPredicted RBP12.17□□□□□ -0.46
HDAC4-210ENST00000493582 TOP3BO95985 862 aaKnown RBP12.17□□□□□ -0.46
HDAC4-210ENST00000493582 PDGFRBP09619 1106 aa12.17□□□□□ -0.46
HDAC4-210ENST00000493582 RBP3P10745 1247 aa12.17□□□□□ -0.46
HDAC4-210ENST00000493582 COPAP53621 1224 aa12.17□□□□□ -0.46
HDAC4-210ENST00000493582 NAA20P61599 178 aa12.17□□□□□ -0.46
HDAC4-210ENST00000493582 YWHAGP61981 247 aaKnown RBP eCLIP12.17□□□□□ -0.46
HDAC4-210ENST00000493582 PSMC5P62195 406 aa12.17□□□□□ -0.46
HDAC4-210ENST00000493582 MRPS5P82675 430 aaKnown RBP12.17□□□□□ -0.46
HDAC4-210ENST00000493582 MYBPC2Q14324 1141 aa12.17□□□□□ -0.46
HDAC4-210ENST00000493582 KCTD21Q4G0X4 260 aa12.17□□□□□ -0.46
HDAC4-210ENST00000493582 DRICH1Q6PGQ1 229 aaPredicted RBP12.17□□□□□ -0.46
HDAC4-210ENST00000493582 MON1BQ7L1V2 547 aa12.17□□□□□ -0.46
HDAC4-210ENST00000493582 KBTBD6Q86V97 674 aa12.17□□□□□ -0.46
HDAC4-210ENST00000493582 PDIK1LQ8N165 341 aa12.17□□□□□ -0.46
HDAC4-210ENST00000493582 BBS5Q8N3I7 341 aa12.17□□□□□ -0.46
HDAC4-210ENST00000493582 SLC44A1Q8WWI5 657 aa12.17□□□□□ -0.46
HDAC4-210ENST00000493582 MYH14Q7Z406 1995 aaKnown RBP12.17□□□□□ -0.46
HDAC4-210ENST00000493582 KBTBD13C9JR72 458 aa12.17□□□□□ -0.46
HDAC4-210ENST00000493582 PEX1O43933 1283 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms