RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 HDDC3Q8N4P3 179 aa18.88■□□□□ 0.61
NUP50-218ENST00000493456 CEP76Q8TAP6 659 aa18.88■□□□□ 0.61
NUP50-218ENST00000493456 MTMR12Q9C0I1 747 aa18.88■□□□□ 0.61
NUP50-218ENST00000493456 TMEM74BQ9NUR3 256 aa18.88■□□□□ 0.61
NUP50-218ENST00000493456 MBD1Q9UIS9 605 aaPredicted RBP18.88■□□□□ 0.61
NUP50-218ENST00000493456 SIX4Q9UIU6 781 aa18.88■□□□□ 0.61
NUP50-218ENST00000493456 PILRBQ9UKJ0 227 aa18.88■□□□□ 0.61
NUP50-218ENST00000493456 SMG1Q96Q15 3661 aaKnown RBP18.88■□□□□ 0.61
NUP50-218ENST00000493456 ZNF840PA6NDX5 716 aa18.87■□□□□ 0.61
NUP50-218ENST00000493456 AP5Z1O43299 807 aa18.87■□□□□ 0.61
NUP50-218ENST00000493456 HCRTO43612 131 aa18.87■□□□□ 0.61
NUP50-218ENST00000493456 GAP43P17677 238 aa18.87■□□□□ 0.61
NUP50-218ENST00000493456 BDNFP23560 247 aa18.87■□□□□ 0.61
NUP50-218ENST00000493456 GRIA2P42262 883 aa18.87■□□□□ 0.61
NUP50-218ENST00000493456 TNFRSF4P43489 277 aa18.87■□□□□ 0.61
NUP50-218ENST00000493456 NOP14P78316 857 aaKnown RBP18.87■□□□□ 0.61
NUP50-218ENST00000493456 SIM1P81133 766 aaPredicted RBP18.87■□□□□ 0.61
NUP50-218ENST00000493456 RING1Q06587 406 aa18.87■□□□□ 0.61
NUP50-218ENST00000493456 KCNA1Q09470 495 aa18.87■□□□□ 0.61
NUP50-218ENST00000493456 DYMQ7RTS9 669 aa18.87■□□□□ 0.61
NUP50-218ENST00000493456 LIMS2Q7Z4I7 341 aa18.87■□□□□ 0.61
NUP50-218ENST00000493456 RABEPKQ7Z6M1 372 aa18.87■□□□□ 0.61
NUP50-218ENST00000493456 ZSWIM2Q8NEG5 633 aa18.87■□□□□ 0.61
NUP50-218ENST00000493456 HMGB4Q8WW32 186 aa18.87■□□□□ 0.61
NUP50-218ENST00000493456 ANKRD36BP1Q96IX9 119 aa18.87■□□□□ 0.61
NUP50-218ENST00000493456 ARHGEF4Q9NR80 690 aa18.87■□□□□ 0.61
NUP50-218ENST00000493456 STK17AQ9UEE5 414 aa18.87■□□□□ 0.61
NUP50-218ENST00000493456 KLK13Q9UKR3 277 aa18.87■□□□□ 0.61
NUP50-218ENST00000493456 LHX6Q9UPM6 363 aa18.87■□□□□ 0.61
NUP50-218ENST00000493456 PCDHB13Q9Y5F0 798 aa18.87■□□□□ 0.61
NUP50-218ENST00000493456 CPQQ9Y646 472 aa18.87■□□□□ 0.61
NUP50-218ENST00000493456 FASNP49327 2511 aaKnown RBP18.87■□□□□ 0.61
NUP50-218ENST00000493456 ATXN2Q99700 1313 aaKnown RBP18.86■□□□□ 0.61
NUP50-218ENST00000493456 ATP2C2O75185 946 aa18.86■□□□□ 0.61
NUP50-218ENST00000493456 GCNT3O95395 438 aa18.86■□□□□ 0.61
NUP50-218ENST00000493456 CFIP05156 583 aa18.86■□□□□ 0.61
NUP50-218ENST00000493456 KIR2DL1P43626 348 aaPredicted RBP18.86■□□□□ 0.61
NUP50-218ENST00000493456 USP46P62068 366 aa18.86■□□□□ 0.61
NUP50-218ENST00000493456 PSMC1P62191 440 aaKnown RBP18.86■□□□□ 0.61
NUP50-218ENST00000493456 GRIN1Q05586 938 aa18.86■□□□□ 0.61
NUP50-218ENST00000493456 ALCAMQ13740 583 aa18.86■□□□□ 0.61
NUP50-218ENST00000493456 DUOXA1Q1HG43 343 aa18.86■□□□□ 0.61
NUP50-218ENST00000493456 PREPLQ4J6C6 727 aaPredicted RBP18.86■□□□□ 0.61
NUP50-218ENST00000493456 TRMT11Q7Z4G4 463 aaKnown RBP18.86■□□□□ 0.61
NUP50-218ENST00000493456 SFTPA1Q8IWL2 248 aa18.86■□□□□ 0.61
NUP50-218ENST00000493456 KCNV2Q8TDN2 545 aa18.86■□□□□ 0.61
NUP50-218ENST00000493456 KBTBD7Q8WVZ9 684 aa18.86■□□□□ 0.61
NUP50-218ENST00000493456 CRTAC1Q9NQ79 661 aa18.86■□□□□ 0.61
NUP50-218ENST00000493456 OLFML3Q9NRN5 406 aa18.86■□□□□ 0.61
NUP50-218ENST00000493456 TBC1D14Q9P2M4 693 aa18.86■□□□□ 0.61
NUP50-218ENST00000493456 SLC6A14Q9UN76 642 aa18.86■□□□□ 0.61
NUP50-218ENST00000493456 SPAARA0A1B0GVQ0 90 aa18.85■□□□□ 0.61
NUP50-218ENST00000493456 TCRBV21S2A2A0A5A6 115 aa18.85■□□□□ 0.61
NUP50-218ENST00000493456 FAM221BA6H8Z2 402 aa18.85■□□□□ 0.61
NUP50-218ENST00000493456 ADAM23O75077 832 aa18.85■□□□□ 0.61
NUP50-218ENST00000493456 OAS1P00973 400 aaKnown RBP18.85■□□□□ 0.61
NUP50-218ENST00000493456 NEFLP07196 543 aa18.85■□□□□ 0.61
NUP50-218ENST00000493456 ADH5P11766 374 aa18.85■□□□□ 0.61
NUP50-218ENST00000493456 ITPKAP23677 461 aa18.85■□□□□ 0.61
NUP50-218ENST00000493456 LMO2P25791 158 aa18.85■□□□□ 0.61
NUP50-218ENST00000493456 GJB2P29033 226 aa18.85■□□□□ 0.61
NUP50-218ENST00000493456 SLC6A11P48066 632 aa18.85■□□□□ 0.61
NUP50-218ENST00000493456 CYP27A1Q02318 531 aa18.85■□□□□ 0.61
NUP50-218ENST00000493456 GFPT1Q06210 699 aaPredicted RBP18.85■□□□□ 0.61
NUP50-218ENST00000493456 MESP2Q0VG99 397 aa18.85■□□□□ 0.61
NUP50-218ENST00000493456 HNRNPDQ14103 355 aaKnown RBP18.85■□□□□ 0.61
NUP50-218ENST00000493456 SCARA3Q6AZY7 606 aa18.85■□□□□ 0.61
NUP50-218ENST00000493456 RHBDF2Q6PJF5 856 aa18.85■□□□□ 0.61
NUP50-218ENST00000493456 SLC36A4Q6YBV0 504 aa18.85■□□□□ 0.61
NUP50-218ENST00000493456 C12orf40Q86WS4 652 aa18.85■□□□□ 0.61
NUP50-218ENST00000493456 SYCP3Q8IZU3 236 aa18.85■□□□□ 0.61
NUP50-218ENST00000493456 PGBD3Q8N328 593 aa18.85■□□□□ 0.61
NUP50-218ENST00000493456 FRMD1Q8N878 549 aa18.85■□□□□ 0.61
NUP50-218ENST00000493456 HPDLQ96IR7 371 aa18.85■□□□□ 0.61
NUP50-218ENST00000493456 C8orf48Q96LL4 319 aa18.85■□□□□ 0.61
NUP50-218ENST00000493456 RNF38Q9H0F5 515 aa18.85■□□□□ 0.61
NUP50-218ENST00000493456 PDE11AQ9HCR9 933 aa18.85■□□□□ 0.61
NUP50-218ENST00000493456 KIAA0391O15091 583 aaKnown RBP18.84■□□□□ 0.61
NUP50-218ENST00000493456 OPHN1O60890 802 aa18.84■□□□□ 0.61
NUP50-218ENST00000493456 SERPINF2P08697 491 aa18.84■□□□□ 0.61
NUP50-218ENST00000493456 WARSP23381 471 aaKnown RBP18.84■□□□□ 0.61
NUP50-218ENST00000493456 KDSRQ06136 332 aa18.84■□□□□ 0.61
NUP50-218ENST00000493456 ZNF423Q2M1K9 1284 aa18.84■□□□□ 0.61
NUP50-218ENST00000493456 BRAPQ7Z569 592 aa18.84■□□□□ 0.61
NUP50-218ENST00000493456 MYCBPAPQ8TBZ2 947 aa18.84■□□□□ 0.61
NUP50-218ENST00000493456 OTUB2Q96DC9 234 aa18.84■□□□□ 0.61
NUP50-218ENST00000493456 PCED1BQ96HM7 432 aa18.84■□□□□ 0.61
NUP50-218ENST00000493456 FAM84AQ96KN4 292 aa18.84■□□□□ 0.61
NUP50-218ENST00000493456 SLITRK1Q96PX8 696 aa18.84■□□□□ 0.61
NUP50-218ENST00000493456 CBWD1Q9BRT8 395 aa18.84■□□□□ 0.61
NUP50-218ENST00000493456 INTS13Q9NVM9 706 aa18.84■□□□□ 0.61
NUP50-218ENST00000493456 SMPD4Q9NXE4 827 aa18.84■□□□□ 0.61
NUP50-218ENST00000493456 TBC1D7Q9P0N9 293 aa18.84■□□□□ 0.61
NUP50-218ENST00000493456 CFAP97Q9P2B7 532 aa18.84■□□□□ 0.61
NUP50-218ENST00000493456 CCDC39Q9UFE4 941 aa18.84■□□□□ 0.61
NUP50-218ENST00000493456 GOLGA8IPA6NC78 632 aa18.83■□□□□ 0.6
NUP50-218ENST00000493456 GOLGA8JA6NMD2 632 aa18.83■□□□□ 0.6
NUP50-218ENST00000493456 F8VP50 259 aa18.83■□□□□ 0.6
NUP50-218ENST00000493456 ABL1P00519 1130 aa18.83■□□□□ 0.6
NUP50-218ENST00000493456 TNNC2P02585 160 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms