RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 FAM90A15PP0C7V4 464 aa5.22□□□□□ -1.57
VPS13A-212ENST00000493341 FAM90A14PP0C7W9 464 aa5.22□□□□□ -1.57
VPS13A-212ENST00000493341 DLG4P78352 724 aa5.22□□□□□ -1.57
VPS13A-212ENST00000493341 PTCHD3Q3KNS1 767 aa5.22□□□□□ -1.57
VPS13A-212ENST00000493341 GALNTL6Q49A17 601 aa5.22□□□□□ -1.57
VPS13A-212ENST00000493341 MED25Q71SY5 747 aa5.22□□□□□ -1.57
VPS13A-212ENST00000493341 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.22□□□□□ -1.57
VPS13A-212ENST00000493341 ADGRE4PQ86SQ3 457 aa5.22□□□□□ -1.57
VPS13A-212ENST00000493341 ZMIZ2Q8NF64 920 aa5.22□□□□□ -1.57
VPS13A-212ENST00000493341 FNIP1Q8TF40 1166 aa5.22□□□□□ -1.57
VPS13A-212ENST00000493341 TBC1D22AQ8WUA7 517 aa5.22□□□□□ -1.57
VPS13A-212ENST00000493341 AJUBAQ96IF1 538 aa5.22□□□□□ -1.57
VPS13A-212ENST00000493341 TMEM168Q9H0V1 697 aa5.22□□□□□ -1.57
VPS13A-212ENST00000493341 UNKLQ9H9P5 680 aaKnown RBP5.22□□□□□ -1.57
VPS13A-212ENST00000493341 SPON1Q9HCB6 807 aa5.22□□□□□ -1.57
VPS13A-212ENST00000493341 NDUFAF4Q9P032 175 aa5.22□□□□□ -1.57
VPS13A-212ENST00000493341 VPS28Q9UK41 221 aa5.22□□□□□ -1.57
VPS13A-212ENST00000493341 HSF4Q9ULV5 492 aa5.22□□□□□ -1.57
VPS13A-212ENST00000493341 HDAC5Q9UQL6 1122 aa5.22□□□□□ -1.57
VPS13A-212ENST00000493341 RSF1Q96T23 1441 aaPredicted RBP5.22□□□□□ -1.57
VPS13A-212ENST00000493341 MYOCOSA0A1B0GUC4 107 aa5.21□□□□□ -1.57
VPS13A-212ENST00000493341 VWA3AA6NCI4 1184 aa5.21□□□□□ -1.57
VPS13A-212ENST00000493341 EFCAB8A8MWE9 144 aa5.21□□□□□ -1.57
VPS13A-212ENST00000493341 RPP40O75818 363 aaKnown RBP5.21□□□□□ -1.57
VPS13A-212ENST00000493341 CNPP09543 421 aaKnown RBP5.21□□□□□ -1.57
VPS13A-212ENST00000493341 CSF1P09603 554 aa5.21□□□□□ -1.57
VPS13A-212ENST00000493341 ATXN1LP0C7T5 689 aaKnown RBP5.21□□□□□ -1.57
VPS13A-212ENST00000493341 AKR1B1P15121 316 aa5.21□□□□□ -1.57
VPS13A-212ENST00000493341 NTSR1P30989 418 aa5.21□□□□□ -1.57
VPS13A-212ENST00000493341 CSF2RBP32927 897 aa5.21□□□□□ -1.57
VPS13A-212ENST00000493341 ACTN2P35609 894 aa5.21□□□□□ -1.57
VPS13A-212ENST00000493341 MAGEA10P43363 369 aaPredicted RBP5.21□□□□□ -1.57
VPS13A-212ENST00000493341 TOB1P50616 345 aaPredicted RBP5.21□□□□□ -1.57
VPS13A-212ENST00000493341 P3H1Q32P28 736 aa5.21□□□□□ -1.57
VPS13A-212ENST00000493341 TRIM60Q495X7 471 aa5.21□□□□□ -1.57
VPS13A-212ENST00000493341 C1QTNF12Q5T7M4 302 aa5.21□□□□□ -1.57
VPS13A-212ENST00000493341 SYNE3Q6ZMZ3 975 aa5.21□□□□□ -1.57
VPS13A-212ENST00000493341 SPARTQ8N0X7 666 aa5.21□□□□□ -1.57
VPS13A-212ENST00000493341 CFAP52Q8N1V2 620 aa5.21□□□□□ -1.57
VPS13A-212ENST00000493341 DNAJB14Q8TBM8 379 aa5.21□□□□□ -1.57
VPS13A-212ENST00000493341 TRIB1Q96RU8 372 aa5.21□□□□□ -1.57
VPS13A-212ENST00000493341 GPR20Q99678 358 aa5.21□□□□□ -1.57
VPS13A-212ENST00000493341 SMOQ99835 787 aa5.21□□□□□ -1.57
VPS13A-212ENST00000493341 TTPALQ9BTX7 342 aa5.21□□□□□ -1.57
VPS13A-212ENST00000493341 PDCL3Q9H2J4 239 aa5.21□□□□□ -1.57
VPS13A-212ENST00000493341 RMI1Q9H9A7 625 aa5.21□□□□□ -1.57
VPS13A-212ENST00000493341 DNAJB11Q9UBS4 358 aa5.21□□□□□ -1.57
VPS13A-212ENST00000493341 TBC1D29Q9UFV1 150 aa5.21□□□□□ -1.57
VPS13A-212ENST00000493341 NR2E1Q9Y466 385 aa5.21□□□□□ -1.57
VPS13A-212ENST00000493341 OR2W5A6NFC9 320 aa5.21□□□□□ -1.58
VPS13A-212ENST00000493341 TSPY2A6NKD2 308 aa5.21□□□□□ -1.58
VPS13A-212ENST00000493341 AP3D1O14617 1153 aa5.21□□□□□ -1.58
VPS13A-212ENST00000493341 KLK10O43240 276 aa5.21□□□□□ -1.58
VPS13A-212ENST00000493341 CER1O95813 267 aa5.21□□□□□ -1.58
VPS13A-212ENST00000493341 TSPY3P0CV98 308 aa5.21□□□□□ -1.58
VPS13A-212ENST00000493341 TSPY8P0CW00 308 aa5.21□□□□□ -1.58
VPS13A-212ENST00000493341 HGFP14210 728 aa5.21□□□□□ -1.58
VPS13A-212ENST00000493341 ALOX12P18054 663 aa5.21□□□□□ -1.58
VPS13A-212ENST00000493341 MCCP23508 829 aa5.21□□□□□ -1.58
VPS13A-212ENST00000493341 RPL13P26373 211 aaKnown RBP5.21□□□□□ -1.58
VPS13A-212ENST00000493341 GALNSP34059 522 aa5.21□□□□□ -1.58
VPS13A-212ENST00000493341 TSPY1Q01534 308 aa5.21□□□□□ -1.58
VPS13A-212ENST00000493341 TCF15Q12870 199 aa5.21□□□□□ -1.58
VPS13A-212ENST00000493341 NOMO2Q5JPE7 1267 aa5.21□□□□□ -1.58
VPS13A-212ENST00000493341 MCTP2Q6DN12 878 aa5.21□□□□□ -1.58
VPS13A-212ENST00000493341 ZSWIM9Q86XI8 627 aa5.21□□□□□ -1.58
VPS13A-212ENST00000493341 USP38Q8NB14 1042 aa5.21□□□□□ -1.58
VPS13A-212ENST00000493341 PSD4Q8NDX1 1056 aa5.21□□□□□ -1.58
VPS13A-212ENST00000493341 ZFP28Q8NHY6 868 aa5.21□□□□□ -1.58
VPS13A-212ENST00000493341 KCNN1Q92952 543 aa5.21□□□□□ -1.58
VPS13A-212ENST00000493341 APOPT1Q96IL0 206 aa5.21□□□□□ -1.58
VPS13A-212ENST00000493341 GBA2Q9HCG7 927 aaPredicted RBP5.21□□□□□ -1.58
VPS13A-212ENST00000493341 FAM30AQ9NZY2 134 aa5.21□□□□□ -1.58
VPS13A-212ENST00000493341 POGKQ9P215 609 aa5.21□□□□□ -1.58
VPS13A-212ENST00000493341 RAD54BQ9Y620 910 aa5.21□□□□□ -1.58
VPS13A-212ENST00000493341 A0A1W2PRX2 142 aa5.2□□□□□ -1.58
VPS13A-212ENST00000493341 P4HA2O15460 535 aa5.2□□□□□ -1.58
VPS13A-212ENST00000493341 TSPAN3O60637 253 aa5.2□□□□□ -1.58
VPS13A-212ENST00000493341 TMEM63AO94886 807 aa5.2□□□□□ -1.58
VPS13A-212ENST00000493341 PLA2G1BP04054 148 aaKnown RBP5.2□□□□□ -1.58
VPS13A-212ENST00000493341 FURINP09958 794 aa5.2□□□□□ -1.58
VPS13A-212ENST00000493341 GGT5P36269 586 aa5.2□□□□□ -1.58
VPS13A-212ENST00000493341 PAFAH1B1P43034 410 aa5.2□□□□□ -1.58
VPS13A-212ENST00000493341 ZNF134P52741 427 aa5.2□□□□□ -1.58
VPS13A-212ENST00000493341 RPP30P78346 268 aaKnown RBP5.2□□□□□ -1.58
VPS13A-212ENST00000493341 PIGFQ07326 219 aa5.2□□□□□ -1.58
VPS13A-212ENST00000493341 CSHL1Q14406 222 aa5.2□□□□□ -1.58
VPS13A-212ENST00000493341 CPLX4Q7Z7G2 160 aa5.2□□□□□ -1.58
VPS13A-212ENST00000493341 NGEFQ8N5V2 710 aa5.2□□□□□ -1.58
VPS13A-212ENST00000493341 RABGGTAQ92696 567 aa5.2□□□□□ -1.58
VPS13A-212ENST00000493341 RBM17Q96I25 401 aaKnown RBP5.2□□□□□ -1.58
VPS13A-212ENST00000493341 ZBTB45Q96K62 511 aaPredicted RBP5.2□□□□□ -1.58
VPS13A-212ENST00000493341 YTHDC1Q96MU7 727 aaKnown RBP5.2□□□□□ -1.58
VPS13A-212ENST00000493341 DIRC2Q96SL1 478 aa5.2□□□□□ -1.58
VPS13A-212ENST00000493341 TCF25Q9BQ70 676 aa5.2□□□□□ -1.58
VPS13A-212ENST00000493341 SMOC2Q9H3U7 446 aa5.2□□□□□ -1.58
VPS13A-212ENST00000493341 PRDM13Q9H4Q3 707 aa5.2□□□□□ -1.58
VPS13A-212ENST00000493341 KCNK12Q9HB15 430 aa5.2□□□□□ -1.58
VPS13A-212ENST00000493341 USP22Q9UPT9 525 aa5.2□□□□□ -1.58
VPS13A-212ENST00000493341 MAGED1Q9Y5V3 778 aaPredicted RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms