RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 SIX4Q9UIU6 781 aa11.74□□□□□ -0.53
SNRNP200-207ENST00000493271 SLC6A14Q9UN76 642 aa11.74□□□□□ -0.53
SNRNP200-207ENST00000493271 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.74□□□□□ -0.53
SNRNP200-207ENST00000493271 BAHCC1Q9P281 2608 aa11.74□□□□□ -0.53
SNRNP200-207ENST00000493271 THADAQ6YHU6 1953 aa11.74□□□□□ -0.53
SNRNP200-207ENST00000493271 E2F8A0AVK6 867 aa11.73□□□□□ -0.53
SNRNP200-207ENST00000493271 FAM221BA6H8Z2 402 aa11.73□□□□□ -0.53
SNRNP200-207ENST00000493271 ZNF840PA6NDX5 716 aa11.73□□□□□ -0.53
SNRNP200-207ENST00000493271 ZBTB24O43167 697 aaPredicted RBP11.73□□□□□ -0.53
SNRNP200-207ENST00000493271 KLF8O95600 359 aaPredicted RBP11.73□□□□□ -0.53
SNRNP200-207ENST00000493271 OAS1P00973 400 aaKnown RBP11.73□□□□□ -0.53
SNRNP200-207ENST00000493271 IGF2RP11717 2491 aa11.73□□□□□ -0.53
SNRNP200-207ENST00000493271 ENGP17813 658 aa11.73□□□□□ -0.53
SNRNP200-207ENST00000493271 BDNFP23560 247 aa11.73□□□□□ -0.53
SNRNP200-207ENST00000493271 KIR2DL1P43626 348 aaPredicted RBP11.73□□□□□ -0.53
SNRNP200-207ENST00000493271 CYP27A1Q02318 531 aa11.73□□□□□ -0.53
SNRNP200-207ENST00000493271 GAD2Q05329 585 aa11.73□□□□□ -0.53
SNRNP200-207ENST00000493271 GFPT1Q06210 699 aaPredicted RBP11.73□□□□□ -0.53
SNRNP200-207ENST00000493271 COL9A2Q14055 689 aaPredicted RBP11.73□□□□□ -0.53
SNRNP200-207ENST00000493271 SF3A1Q15459 793 aaKnown RBP11.73□□□□□ -0.53
SNRNP200-207ENST00000493271 DUOXA2Q1HG44 320 aa11.73□□□□□ -0.53
SNRNP200-207ENST00000493271 MAP7D1Q3KQU3 841 aa11.73□□□□□ -0.53
SNRNP200-207ENST00000493271 TDRD10Q5VZ19 366 aaKnown RBP11.73□□□□□ -0.53
SNRNP200-207ENST00000493271 PIP4P1Q86T03 277 aa11.73□□□□□ -0.53
SNRNP200-207ENST00000493271 TTC30AQ86WT1 665 aa11.73□□□□□ -0.53
SNRNP200-207ENST00000493271 ALLCQ8N6M5 410 aa11.73□□□□□ -0.53
SNRNP200-207ENST00000493271 MYCBPAPQ8TBZ2 947 aa11.73□□□□□ -0.53
SNRNP200-207ENST00000493271 KBTBD7Q8WVZ9 684 aa11.73□□□□□ -0.53
SNRNP200-207ENST00000493271 HPDLQ96IR7 371 aa11.73□□□□□ -0.53
SNRNP200-207ENST00000493271 FNBP1Q96RU3 617 aa11.73□□□□□ -0.53
SNRNP200-207ENST00000493271 MTMR12Q9C0I1 747 aa11.73□□□□□ -0.53
SNRNP200-207ENST00000493271 ELOVL4Q9GZR5 314 aa11.73□□□□□ -0.53
SNRNP200-207ENST00000493271 ANAPC1Q9H1A4 1944 aa11.73□□□□□ -0.53
SNRNP200-207ENST00000493271 ARHGEF4Q9NR80 690 aa11.73□□□□□ -0.53
SNRNP200-207ENST00000493271 PILRBQ9UKJ0 227 aa11.73□□□□□ -0.53
SNRNP200-207ENST00000493271 CPQQ9Y646 472 aa11.73□□□□□ -0.53
SNRNP200-207ENST00000493271 PLXND1Q9Y4D7 1925 aa11.72□□□□□ -0.53
SNRNP200-207ENST00000493271 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.72□□□□□ -0.53
SNRNP200-207ENST00000493271 ZNF233A6NK53 670 aa11.72□□□□□ -0.53
SNRNP200-207ENST00000493271 SGK1O00141 431 aa11.72□□□□□ -0.53
SNRNP200-207ENST00000493271 ZNF217O75362 1048 aa11.72□□□□□ -0.53
SNRNP200-207ENST00000493271 TACC1O75410 805 aa11.72□□□□□ -0.53
SNRNP200-207ENST00000493271 SERPINF2P08697 491 aa11.72□□□□□ -0.53
SNRNP200-207ENST00000493271 ADH5P11766 374 aa11.72□□□□□ -0.53
SNRNP200-207ENST00000493271 SPINK2P20155 84 aa11.72□□□□□ -0.53
SNRNP200-207ENST00000493271 TIE1P35590 1138 aa11.72□□□□□ -0.53
SNRNP200-207ENST00000493271 PTGER3P43115 390 aa11.72□□□□□ -0.53
SNRNP200-207ENST00000493271 MAPK8P45983 427 aa11.72□□□□□ -0.53
SNRNP200-207ENST00000493271 WNT7BP56706 349 aa11.72□□□□□ -0.53
SNRNP200-207ENST00000493271 ZXDBP98169 803 aa11.72□□□□□ -0.53
SNRNP200-207ENST00000493271 KCNA1Q09470 495 aa11.72□□□□□ -0.53
SNRNP200-207ENST00000493271 ZNF423Q2M1K9 1284 aa11.72□□□□□ -0.53
SNRNP200-207ENST00000493271 RRAGBQ5VZM2 374 aa11.72□□□□□ -0.53
SNRNP200-207ENST00000493271 BTBD8Q5XKL5 378 aa11.72□□□□□ -0.53
SNRNP200-207ENST00000493271 LARP1BQ659C4 914 aaKnown RBP11.72□□□□□ -0.53
SNRNP200-207ENST00000493271 RHBDF2Q6PJF5 856 aa11.72□□□□□ -0.53
SNRNP200-207ENST00000493271 CCDC73Q6ZRK6 1079 aa11.72□□□□□ -0.53
SNRNP200-207ENST00000493271 WDR49Q8IV35 697 aa11.72□□□□□ -0.53
SNRNP200-207ENST00000493271 TMEFF1Q8IYR6 380 aa11.72□□□□□ -0.53
SNRNP200-207ENST00000493271 PGBD3Q8N328 593 aa11.72□□□□□ -0.53
SNRNP200-207ENST00000493271 DNAJC19Q96DA6 116 aa11.72□□□□□ -0.53
SNRNP200-207ENST00000493271 PCED1BQ96HM7 432 aa11.72□□□□□ -0.53
SNRNP200-207ENST00000493271 TMX3Q96JJ7 454 aa11.72□□□□□ -0.53
SNRNP200-207ENST00000493271 PDE11AQ9HCR9 933 aa11.72□□□□□ -0.53
SNRNP200-207ENST00000493271 CRTAC1Q9NQ79 661 aa11.72□□□□□ -0.53
SNRNP200-207ENST00000493271 RALYQ9UKM9 306 aaKnown RBP11.72□□□□□ -0.53
SNRNP200-207ENST00000493271 CIZ1Q9ULV3 898 aaPredicted RBP11.72□□□□□ -0.53
SNRNP200-207ENST00000493271 SMC3Q9UQE7 1217 aa11.72□□□□□ -0.53
SNRNP200-207ENST00000493271 ABCA7Q8IZY2 2146 aa11.72□□□□□ -0.53
SNRNP200-207ENST00000493271 TCRBV21S2A2A0A5A6 115 aa11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 FRMD3A2A2Y4 597 aa11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 F8VP50 259 aa11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 TULP1O00294 542 aaPredicted RBP11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 HOXC11O43248 304 aaPredicted RBP11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 HYAL3O43820 417 aaPredicted RBP11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 OPHN1O60890 802 aa11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 ATP2C2O75185 946 aa11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 RTN3O95197 1032 aaPredicted RBP11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 CFIP05156 583 aa11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 SYPP08247 313 aa11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 MBL2P11226 248 aaPredicted RBP11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 CHRM1P11229 460 aaPredicted RBP11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 HNRNPLP14866 589 aaKnown RBP eCLIP11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 LMO2P25791 158 aa11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 GNL1P36915 607 aaPredicted RBP11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 TUBP50607 506 aa11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 USP46P62068 366 aa11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 PSMC1P62191 440 aaKnown RBP11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 SIM1P81133 766 aaPredicted RBP11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 GRIN1Q05586 938 aa11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 TAF10Q12962 218 aa11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 SLC14A1Q13336 389 aa11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 CCDC142Q17RM4 750 aa11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 LRSAM1Q6UWE0 723 aa11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 HMGB4Q8WW32 186 aa11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 RLN3Q8WXF3 142 aa11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 EPSTI1Q96J88 318 aa11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 MMS19Q96T76 1030 aa11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 CBWD1Q9BRT8 395 aa11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 RNF38Q9H0F5 515 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms