RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 CPA6Q8N4T0 437 aa12.2□□□□□ -0.46
LRTM1-202ENST00000493075 CCDC150Q8NCX0 1101 aa12.2□□□□□ -0.46
LRTM1-202ENST00000493075 RUBCNQ92622 972 aa12.2□□□□□ -0.46
LRTM1-202ENST00000493075 ATP2A3Q93084 1043 aa12.2□□□□□ -0.46
LRTM1-202ENST00000493075 SMARCD1Q96GM5 515 aa12.2□□□□□ -0.46
LRTM1-202ENST00000493075 KCNK16Q96T55 309 aa12.2□□□□□ -0.46
LRTM1-202ENST00000493075 EPC1Q9H2F5 836 aa12.2□□□□□ -0.46
LRTM1-202ENST00000493075 ECT2Q9H8V3 914 aa12.2□□□□□ -0.46
LRTM1-202ENST00000493075 TMEM8AQ9HCN3 771 aa12.2□□□□□ -0.46
LRTM1-202ENST00000493075 CSNK1G1Q9HCP0 422 aa12.2□□□□□ -0.46
LRTM1-202ENST00000493075 DMAP1Q9NPF5 467 aaPredicted RBP12.2□□□□□ -0.46
LRTM1-202ENST00000493075 RBM12Q9NTZ6 932 aaKnown RBP12.2□□□□□ -0.46
LRTM1-202ENST00000493075 MYO15AQ9UKN7 3530 aa12.2□□□□□ -0.46
LRTM1-202ENST00000493075 ATG13O75143 517 aa12.19□□□□□ -0.46
LRTM1-202ENST00000493075 CLSTN1O94985 981 aa12.19□□□□□ -0.46
LRTM1-202ENST00000493075 OAS1P00973 400 aaKnown RBP12.19□□□□□ -0.46
LRTM1-202ENST00000493075 ARSAP15289 507 aa12.19□□□□□ -0.46
LRTM1-202ENST00000493075 DRD1P21728 446 aa12.19□□□□□ -0.46
LRTM1-202ENST00000493075 GJA4P35212 333 aa12.19□□□□□ -0.46
LRTM1-202ENST00000493075 PRCPP42785 496 aa12.19□□□□□ -0.46
LRTM1-202ENST00000493075 GALK1P51570 392 aa12.19□□□□□ -0.46
LRTM1-202ENST00000493075 NDST1P52848 882 aa12.19□□□□□ -0.46
LRTM1-202ENST00000493075 SATB1Q01826 763 aa12.19□□□□□ -0.46
LRTM1-202ENST00000493075 INCA1Q0VD86 236 aa12.19□□□□□ -0.46
LRTM1-202ENST00000493075 EML3Q32P44 896 aa12.19□□□□□ -0.46
LRTM1-202ENST00000493075 FBXO43Q4G163 708 aa12.19□□□□□ -0.46
LRTM1-202ENST00000493075 SPOPLQ6IQ16 392 aa12.19□□□□□ -0.46
LRTM1-202ENST00000493075 SCARA5Q6ZMJ2 495 aa12.19□□□□□ -0.46
LRTM1-202ENST00000493075 TTC39CQ8N584 583 aa12.19□□□□□ -0.46
LRTM1-202ENST00000493075 TAS1R2Q8TE23 839 aa12.19□□□□□ -0.46
LRTM1-202ENST00000493075 ELMO3Q96BJ8 720 aa12.19□□□□□ -0.46
LRTM1-202ENST00000493075 CHFRQ96EP1 664 aa12.19□□□□□ -0.46
LRTM1-202ENST00000493075 MED10Q9BTT4 135 aa12.19□□□□□ -0.46
LRTM1-202ENST00000493075 DNAI2Q9GZS0 605 aa12.19□□□□□ -0.46
LRTM1-202ENST00000493075 RNF38Q9H0F5 515 aa12.19□□□□□ -0.46
LRTM1-202ENST00000493075 FAM124BQ9H5Z6 455 aaPredicted RBP12.19□□□□□ -0.46
LRTM1-202ENST00000493075 APOBEC3GQ9HC16 384 aaKnown RBP12.19□□□□□ -0.46
LRTM1-202ENST00000493075 PCDHA5Q9Y5H7 936 aa12.19□□□□□ -0.46
LRTM1-202ENST00000493075 COL4A2P08572 1712 aa12.19□□□□□ -0.46
LRTM1-202ENST00000493075 TCHHQ07283 1943 aa12.19□□□□□ -0.46
LRTM1-202ENST00000493075 CHURC1-FNTBB4DL54 471 aa12.18□□□□□ -0.46
LRTM1-202ENST00000493075 K7ESF4 209 aa12.18□□□□□ -0.46
LRTM1-202ENST00000493075 LEFTY2O00292 366 aa12.18□□□□□ -0.46
LRTM1-202ENST00000493075 SLC9A3R1O14745 358 aaPredicted RBP12.18□□□□□ -0.46
LRTM1-202ENST00000493075 AP1G2O75843 785 aa12.18□□□□□ -0.46
LRTM1-202ENST00000493075 ZDHHC11BP0C7U3 371 aa12.18□□□□□ -0.46
LRTM1-202ENST00000493075 TRIM49P0CI25 452 aa12.18□□□□□ -0.46
LRTM1-202ENST00000493075 TRIM49CP0CI26 452 aa12.18□□□□□ -0.46
LRTM1-202ENST00000493075 EPB41P11171 864 aaKnown RBP12.18□□□□□ -0.46
LRTM1-202ENST00000493075 CNR2P34972 360 aa12.18□□□□□ -0.46
LRTM1-202ENST00000493075 TUBP50607 506 aa12.18□□□□□ -0.46
LRTM1-202ENST00000493075 ZXDBP98169 803 aa12.18□□□□□ -0.46
LRTM1-202ENST00000493075 FKBP3Q00688 224 aaKnown RBP12.18□□□□□ -0.46
LRTM1-202ENST00000493075 FSTL4Q6MZW2 842 aa12.18□□□□□ -0.46
LRTM1-202ENST00000493075 Q6ZS52 159 aa12.18□□□□□ -0.46
LRTM1-202ENST00000493075 DDX42Q86XP3 938 aaKnown RBP eCLIP12.18□□□□□ -0.46
LRTM1-202ENST00000493075 ZC3H3Q8IXZ2 948 aaKnown RBP12.18□□□□□ -0.46
LRTM1-202ENST00000493075 SMYD4Q8IYR2 804 aaPredicted RBP12.18□□□□□ -0.46
LRTM1-202ENST00000493075 ADGRG2Q8IZP9 1017 aa12.18□□□□□ -0.46
LRTM1-202ENST00000493075 SLC2A14Q8TDB8 520 aa12.18□□□□□ -0.46
LRTM1-202ENST00000493075 SMARCE1Q969G3 411 aa12.18□□□□□ -0.46
LRTM1-202ENST00000493075 FBXO32Q969P5 355 aa12.18□□□□□ -0.46
LRTM1-202ENST00000493075 HNRNPABQ99729 332 aaKnown RBP12.18□□□□□ -0.46
LRTM1-202ENST00000493075 TSG101Q99816 390 aa12.18□□□□□ -0.46
LRTM1-202ENST00000493075 SMOQ99835 787 aa12.18□□□□□ -0.46
LRTM1-202ENST00000493075 P2RY13Q9BPV8 354 aa12.18□□□□□ -0.46
LRTM1-202ENST00000493075 NT5C1AQ9BXI3 368 aa12.18□□□□□ -0.46
LRTM1-202ENST00000493075 NIF3L1Q9GZT8 377 aa12.18□□□□□ -0.46
LRTM1-202ENST00000493075 LINC00597Q9H2U6 94 aa12.18□□□□□ -0.46
LRTM1-202ENST00000493075 FBXO44Q9H4M3 255 aa12.18□□□□□ -0.46
LRTM1-202ENST00000493075 CHORDC1Q9UHD1 332 aaPredicted RBP12.18□□□□□ -0.46
LRTM1-202ENST00000493075 WNT6Q9Y6F9 365 aa12.18□□□□□ -0.46
LRTM1-202ENST00000493075 DMDP11532 3685 aa12.18□□□□□ -0.46
LRTM1-202ENST00000493075 SLC16A3O15427 465 aaKnown RBP12.17□□□□□ -0.46
LRTM1-202ENST00000493075 CILPO75339 1184 aa12.17□□□□□ -0.46
LRTM1-202ENST00000493075 NFATC1O95644 943 aa12.17□□□□□ -0.46
LRTM1-202ENST00000493075 ABL1P00519 1130 aa12.17□□□□□ -0.46
LRTM1-202ENST00000493075 PPP1R2P41236 205 aa12.17□□□□□ -0.46
LRTM1-202ENST00000493075 SLC5A3P53794 718 aa12.17□□□□□ -0.46
LRTM1-202ENST00000493075 LRRC63Q05C16 580 aa12.17□□□□□ -0.46
LRTM1-202ENST00000493075 HECTD3Q5T447 861 aa12.17□□□□□ -0.46
LRTM1-202ENST00000493075 LONP2Q86WA8 852 aa12.17□□□□□ -0.46
LRTM1-202ENST00000493075 GPR161Q8N6U8 529 aaKnown RBP12.17□□□□□ -0.46
LRTM1-202ENST00000493075 C12orf29Q8N999 325 aa12.17□□□□□ -0.46
LRTM1-202ENST00000493075 FBXL13Q8NEE6 735 aa12.17□□□□□ -0.46
LRTM1-202ENST00000493075 ZMIZ2Q8NF64 920 aa12.17□□□□□ -0.46
LRTM1-202ENST00000493075 CCDC26Q8TAB7 109 aa12.17□□□□□ -0.46
LRTM1-202ENST00000493075 SCAMP5Q8TAC9 235 aa12.17□□□□□ -0.46
LRTM1-202ENST00000493075 CD101Q93033 1021 aa12.17□□□□□ -0.46
LRTM1-202ENST00000493075 SECISBP2LQ93073 1101 aaKnown RBP12.17□□□□□ -0.46
LRTM1-202ENST00000493075 CYFIP2Q96F07 1278 aa12.17□□□□□ -0.46
LRTM1-202ENST00000493075 DUSP9Q99956 384 aaKnown RBP12.17□□□□□ -0.46
LRTM1-202ENST00000493075 FBRSL1Q9HCM7 1045 aaKnown RBP12.17□□□□□ -0.46
LRTM1-202ENST00000493075 PNPLA8Q9NP80 782 aa12.17□□□□□ -0.46
LRTM1-202ENST00000493075 KRT82Q9NSB4 513 aa12.17□□□□□ -0.46
LRTM1-202ENST00000493075 RAB20Q9NX57 234 aa12.17□□□□□ -0.46
LRTM1-202ENST00000493075 HMGXB4Q9UGU5 601 aa12.17□□□□□ -0.46
LRTM1-202ENST00000493075 CPQQ9Y646 472 aa12.17□□□□□ -0.46
LRTM1-202ENST00000493075 F5P12259 2224 aa12.17□□□□□ -0.46
LRTM1-202ENST00000493075 NUP210Q8TEM1 1887 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms