RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 PRAMEF14Q5SWL7 426 aa3.45□□□□□ -1.86
SNX13-209ENST00000492626 FAXCQ5TGI0 409 aa3.45□□□□□ -1.86
SNX13-209ENST00000492626 CACHD1Q5VU97 1274 aa3.45□□□□□ -1.86
SNX13-209ENST00000492626 Q6ZVL8 140 aa3.45□□□□□ -1.86
SNX13-209ENST00000492626 ATG4DQ86TL0 474 aaPredicted RBP3.45□□□□□ -1.86
SNX13-209ENST00000492626 KRT73Q86Y46 540 aa3.45□□□□□ -1.86
SNX13-209ENST00000492626 PLXDC1Q8IUK5 500 aa3.45□□□□□ -1.86
SNX13-209ENST00000492626 PPP1R14CQ8TAE6 165 aa3.45□□□□□ -1.86
SNX13-209ENST00000492626 IPO4Q8TEX9 1081 aaKnown RBP3.45□□□□□ -1.86
SNX13-209ENST00000492626 AFG1LQ8WV93 481 aa3.45□□□□□ -1.86
SNX13-209ENST00000492626 GOLGA1Q92805 767 aa3.45□□□□□ -1.86
SNX13-209ENST00000492626 MRGPRX1Q96LB2 322 aa3.45□□□□□ -1.86
SNX13-209ENST00000492626 NSUN3Q9H649 340 aaKnown RBP3.45□□□□□ -1.86
SNX13-209ENST00000492626 C19orf73Q9NVV2 129 aa3.45□□□□□ -1.86
SNX13-209ENST00000492626 SHOC2Q9UQ13 582 aa3.45□□□□□ -1.86
SNX13-209ENST00000492626 A0A1W2PRX2 142 aa3.45□□□□□ -1.86
SNX13-209ENST00000492626 FAM234BA2RU67 622 aa3.45□□□□□ -1.86
SNX13-209ENST00000492626 B5MCH6 92 aa3.45□□□□□ -1.86
SNX13-209ENST00000492626 SRGAP2BP0DMP2 458 aa3.45□□□□□ -1.86
SNX13-209ENST00000492626 TNFAIP3P21580 790 aa3.45□□□□□ -1.86
SNX13-209ENST00000492626 MTM1Q13496 603 aa3.45□□□□□ -1.86
SNX13-209ENST00000492626 SLC12A1Q13621 1099 aa3.45□□□□□ -1.86
SNX13-209ENST00000492626 MGAT5BQ3V5L5 792 aa3.45□□□□□ -1.86
SNX13-209ENST00000492626 CNKSR3Q6P9H4 555 aa3.45□□□□□ -1.86
SNX13-209ENST00000492626 NGDNQ8NEJ9 315 aaKnown RBP3.45□□□□□ -1.86
SNX13-209ENST00000492626 OR14K1Q8NGZ2 314 aa3.45□□□□□ -1.86
SNX13-209ENST00000492626 FAM71BQ8TC56 605 aa3.45□□□□□ -1.86
SNX13-209ENST00000492626 RAPGEF4Q8WZA2 1011 aa3.45□□□□□ -1.86
SNX13-209ENST00000492626 TFAP2CQ92754 450 aa3.45□□□□□ -1.86
SNX13-209ENST00000492626 EIF3CQ99613 913 aaKnown RBP3.45□□□□□ -1.86
SNX13-209ENST00000492626 COL20A1Q9P218 1284 aa3.45□□□□□ -1.86
SNX13-209ENST00000492626 ANKFY1Q9P2R3 1169 aa3.45□□□□□ -1.86
SNX13-209ENST00000492626 IRAK3Q9Y616 596 aa3.45□□□□□ -1.86
SNX13-209ENST00000492626 ITIH6Q6UXX5 1313 aa3.45□□□□□ -1.86
SNX13-209ENST00000492626 DDX60LQ5H9U9 1706 aaKnown RBP3.45□□□□□ -1.86
SNX13-209ENST00000492626 UBR2Q8IWV8 1755 aa3.45□□□□□ -1.86
SNX13-209ENST00000492626 SCO2A0A1W2PP80 73 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 AQP7P3A6NL99 342 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 H0YIN7 160 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 RASAL1O95294 804 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 CNOT4O95628 575 aaKnown RBP3.44□□□□□ -1.86
SNX13-209ENST00000492626 IGHA1P01876 353 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 FURINP09958 794 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 MC3RP41968 323 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 SLC6A9P48067 706 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 PRKAG1P54619 331 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 CLRN1P58418 232 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 FOXO4P98177 505 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 TOP3AQ13472 1001 aaPredicted RBP3.44□□□□□ -1.86
SNX13-209ENST00000492626 INTS11Q5TA45 600 aaKnown RBP3.44□□□□□ -1.86
SNX13-209ENST00000492626 BORAQ6PGQ7 559 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 ZGPATQ8N5A5 531 aaKnown RBP3.44□□□□□ -1.86
SNX13-209ENST00000492626 TBC1D15Q8TC07 691 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 GUCD1Q96NT3 240 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 TCF25Q9BQ70 676 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 SORBS1Q9BX66 1292 aaKnown RBP3.44□□□□□ -1.86
SNX13-209ENST00000492626 GJB4Q9NTQ9 266 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 CRYL1Q9Y2S2 319 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 NR2E1Q9Y466 385 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 A0A0G2JMZ2 1700 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 ANKRD36CQ5JPF3 1778 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 FCHO1O14526 889 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 LDHCP07864 332 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 CNTFP26441 200 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 ACVR2AP27037 513 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 HOXD10P28358 340 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 CASRP41180 1078 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 ALDH1A3P47895 512 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 ATP2C1P98194 919 aaPredicted RBP3.44□□□□□ -1.86
SNX13-209ENST00000492626 ADAM9Q13443 819 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 TUBB8Q3ZCM7 444 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 EMC10Q5UCC4 262 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 AGBL4Q5VU57 503 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 USP37Q86T82 979 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 PDSS2Q86YH6 399 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 FTSJ3Q8IY81 847 aaKnown RBP3.44□□□□□ -1.86
SNX13-209ENST00000492626 CELF5Q8N6W0 485 aaKnown RBP3.44□□□□□ -1.86
SNX13-209ENST00000492626 SCAMP4Q969E2 229 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 NKD2Q969F2 451 aaPredicted RBP3.44□□□□□ -1.86
SNX13-209ENST00000492626 IMPG2Q9BZV3 1241 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 NECTIN3Q9NQS3 549 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 HELLSQ9NRZ9 838 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 IFT80Q9P2H3 777 aaPredicted RBP3.44□□□□□ -1.86
SNX13-209ENST00000492626 GRHPRQ9UBQ7 328 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 ADGRA2Q96PE1 1338 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 CLCA1A8K7I4 914 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 F8W8V4 182 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 SNX2O60749 519 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 SEMA7AO75326 666 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 SOAT2O75908 522 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 ABHD16AO95870 558 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 GNAT2P19087 354 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 SPINK2P20155 84 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 LORP23490 312 aaPredicted RBP3.44□□□□□ -1.86
SNX13-209ENST00000492626 LIMS1P48059 325 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 COPAP53621 1224 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 UCP3P55916 312 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 ZNF844Q08AG5 666 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 FOXO1Q12778 655 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 RAB30Q15771 203 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms