RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 TC2NQ8N9U0 490 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 SMG8Q8ND04 991 aaKnown RBP4.7□□□□□ -1.66
TRA2B-215ENST00000492417 SPATA20Q8TB22 786 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 ZNF516Q92618 1163 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 ARMC5Q96C12 935 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 RPGRIP1Q96KN7 1286 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 GDAP1L1Q96MZ0 367 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 PANX2Q96RD6 677 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 FAM118BQ9BPY3 351 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 PACSIN1Q9BY11 444 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 THAP2Q9H0W7 228 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 DMAP1Q9NPF5 467 aaPredicted RBP4.7□□□□□ -1.66
TRA2B-215ENST00000492417 KIAA1551Q9HCM1 1747 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 WDR90Q96KV7 1748 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 E5RJQ4 531 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 KRIT1O00522 736 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 HGSO14964 777 aaPredicted RBP4.69□□□□□ -1.66
TRA2B-215ENST00000492417 SART1O43290 800 aaKnown RBP4.69□□□□□ -1.66
TRA2B-215ENST00000492417 RTN2O75298 545 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 STBD1O95210 358 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 C4BPAP04003 597 aaKnown RBP4.69□□□□□ -1.66
TRA2B-215ENST00000492417 GALTP07902 379 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 HARS2P49590 506 aaKnown RBP4.69□□□□□ -1.66
TRA2B-215ENST00000492417 WDR5P61964 334 aaKnown RBP4.69□□□□□ -1.66
TRA2B-215ENST00000492417 POU5F1BQ06416 359 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 BST2Q10589 180 aaKnown RBP4.69□□□□□ -1.66
TRA2B-215ENST00000492417 EFHC2Q5JST6 749 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 C9orf50Q5SZB4 431 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 DENND1BQ6P3S1 775 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 RAD9BQ6WBX8 426 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 TRIM72Q6ZMU5 477 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 ZNF571Q7Z3V5 609 aaPredicted RBP4.69□□□□□ -1.66
TRA2B-215ENST00000492417 DDX53Q86TM3 631 aaKnown RBP4.69□□□□□ -1.66
TRA2B-215ENST00000492417 HERC6Q8IVU3 1022 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 MAB21L3Q8N8X9 362 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 PPP1R14CQ8TAE6 165 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 GDPD5Q8WTR4 605 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 UBLCP1Q8WVY7 318 aaPredicted RBP4.69□□□□□ -1.66
TRA2B-215ENST00000492417 MCRS1Q96EZ8 462 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 SMARCD1Q96GM5 515 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 CFAP57Q96MR6 1250 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 UROC1Q96N76 676 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 TOX2Q96NM4 488 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 C17orf80Q9BSJ5 609 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 B3GNT5Q9BYG0 378 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 GPR62Q9BZJ7 368 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 ST6GALNAC4Q9H4F1 302 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 PARVAQ9NVD7 372 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 F5P12259 2224 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 DFFAO00273 331 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 TRDMT1O14717 391 aaKnown RBP4.69□□□□□ -1.66
TRA2B-215ENST00000492417 MDM4O15151 490 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 STK10O94804 968 aaKnown RBP4.69□□□□□ -1.66
TRA2B-215ENST00000492417 ZRANB2O95218 330 aaKnown RBP eCLIP4.69□□□□□ -1.66
TRA2B-215ENST00000492417 CYBBP04839 570 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 HDCP19113 662 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 CDR2Q01850 454 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 SF3A3Q12874 501 aaKnown RBP eCLIP4.69□□□□□ -1.663e-8■■■■■ 29.7
TRA2B-215ENST00000492417 CBX2Q14781 532 aaPredicted RBP4.69□□□□□ -1.66
TRA2B-215ENST00000492417 E2F5Q15329 346 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 SMAD1Q15797 465 aaKnown RBP4.69□□□□□ -1.66
TRA2B-215ENST00000492417 SLC18A3Q16572 532 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 MIIPQ5JXC2 388 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 SYCP2LQ5T4T6 812 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 DENND2CQ68D51 928 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 CDCA2Q69YH5 1023 aaPredicted RBP4.69□□□□□ -1.66
TRA2B-215ENST00000492417 C8orf74Q6P047 294 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 NOP9Q86U38 636 aaKnown RBP4.69□□□□□ -1.66
TRA2B-215ENST00000492417 ZC3H18Q86VM9 953 aaKnown RBP4.69□□□□□ -1.66
TRA2B-215ENST00000492417 TMEM86AQ8N2M4 240 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 SLC35G2Q8TBE7 412 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 PLEKHO2Q8TD55 490 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 USP33Q8TEY7 942 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 DDI1Q8WTU0 396 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 RSPH1Q8WYR4 309 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 EXOC4Q96A65 974 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 TIFAQ96CG3 184 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 RPRD1AQ96P16 312 aaPredicted RBP4.69□□□□□ -1.66
TRA2B-215ENST00000492417 GBP5Q96PP8 586 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 TGS1Q96RS0 853 aaKnown RBP4.69□□□□□ -1.66
TRA2B-215ENST00000492417 KCNK16Q96T55 309 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 PPANQ9NQ55 473 aaKnown RBP4.69□□□□□ -1.66
TRA2B-215ENST00000492417 RGS18Q9NS28 235 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 SSX2IPQ9Y2D8 614 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 SAR1BQ9Y6B6 198 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 MYH7BA7E2Y1 1941 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 PRR23AA6NEV1 266 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 C9IYK1 514 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 SGK1O00141 431 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 CAND2O75155 1236 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 ITGB1P05556 798 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 C8AP07357 584 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 CDC25BP30305 580 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 TWF1Q12792 350 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 RAB30Q15771 203 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 CCDC142Q17RM4 750 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 RASIP1Q5U651 963 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 ITIH5Q86UX2 942 aa4.69□□□□□ -1.66
TRA2B-215ENST00000492417 SPATS2Q86XZ4 545 aaKnown RBP4.69□□□□□ -1.66
TRA2B-215ENST00000492417 RHOT2Q8IXI1 618 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms