RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 BTF3P20290 206 aaKnown RBP4.67□□□□□ -1.66
VTA1-204ENST00000491881 PRKAR1BP31321 381 aa4.67□□□□□ -1.66
VTA1-204ENST00000491881 PDE6CP51160 858 aa4.67□□□□□ -1.66
VTA1-204ENST00000491881 NXPH1P58417 271 aa4.67□□□□□ -1.66
VTA1-204ENST00000491881 SCAPQ12770 1279 aa4.67□□□□□ -1.66
VTA1-204ENST00000491881 EIF2B5Q13144 721 aaKnown RBP4.67□□□□□ -1.66
VTA1-204ENST00000491881 STK3Q13188 491 aa4.67□□□□□ -1.66
VTA1-204ENST00000491881 SLC35G1Q2M3R5 365 aa4.67□□□□□ -1.66
VTA1-204ENST00000491881 ZIK1Q3SY52 487 aaPredicted RBP4.67□□□□□ -1.66
VTA1-204ENST00000491881 DGKKQ5KSL6 1271 aa4.67□□□□□ -1.66
VTA1-204ENST00000491881 CERCAMQ5T4B2 595 aa4.67□□□□□ -1.66
VTA1-204ENST00000491881 TEDDM1Q5T9Z0 273 aa4.67□□□□□ -1.66
VTA1-204ENST00000491881 DEPDC1Q5TB30 811 aa4.67□□□□□ -1.66
VTA1-204ENST00000491881 CATSPERGQ6ZRH7 1159 aa4.67□□□□□ -1.66
VTA1-204ENST00000491881 KCTD20Q7Z5Y7 419 aa4.67□□□□□ -1.66
VTA1-204ENST00000491881 SKAP1Q86WV1 359 aa4.67□□□□□ -1.66
VTA1-204ENST00000491881 SLC44A3Q8N4M1 653 aa4.67□□□□□ -1.66
VTA1-204ENST00000491881 DNAJB14Q8TBM8 379 aa4.67□□□□□ -1.66
VTA1-204ENST00000491881 FBXL20Q96IG2 436 aa4.67□□□□□ -1.66
VTA1-204ENST00000491881 PGBD1Q96JS3 809 aa4.67□□□□□ -1.66
VTA1-204ENST00000491881 Q96MF0 132 aa4.67□□□□□ -1.66
VTA1-204ENST00000491881 EIF2AQ9BY44 585 aaKnown RBP4.67□□□□□ -1.66
VTA1-204ENST00000491881 AMBRA1Q9C0C7 1298 aa4.67□□□□□ -1.66
VTA1-204ENST00000491881 FAM83DQ9H4H8 585 aa4.67□□□□□ -1.66
VTA1-204ENST00000491881 GJB4Q9NTQ9 266 aa4.67□□□□□ -1.66
VTA1-204ENST00000491881 TRMT13Q9NUP7 481 aaKnown RBP4.67□□□□□ -1.66
VTA1-204ENST00000491881 SYBUQ9NX95 663 aa4.67□□□□□ -1.66
VTA1-204ENST00000491881 RGS17Q9UGC6 210 aaPredicted RBP4.67□□□□□ -1.66
VTA1-204ENST00000491881 POLR2AP24928 1970 aaKnown RBP4.67□□□□□ -1.66
VTA1-204ENST00000491881 ABHD14A-ACY1A0A1B0GW23 586 aa4.66□□□□□ -1.66
VTA1-204ENST00000491881 AREL1O15033 823 aa4.66□□□□□ -1.66
VTA1-204ENST00000491881 A1BGP04217 495 aa4.66□□□□□ -1.66
VTA1-204ENST00000491881 CHRM2P08172 466 aa4.66□□□□□ -1.66
VTA1-204ENST00000491881 HKR1P10072 659 aa4.66□□□□□ -1.66
VTA1-204ENST00000491881 TYRP1P17643 537 aa4.66□□□□□ -1.66
VTA1-204ENST00000491881 EEF1GP26641 437 aaKnown RBP4.66□□□□□ -1.66
VTA1-204ENST00000491881 CXCR5P32302 372 aa4.66□□□□□ -1.66
VTA1-204ENST00000491881 PPM1AP35813 382 aa4.66□□□□□ -1.66
VTA1-204ENST00000491881 TECP42680 631 aa4.66□□□□□ -1.66
VTA1-204ENST00000491881 HSPA7P48741 367 aa4.66□□□□□ -1.66
VTA1-204ENST00000491881 KRTAP10-9P60411 292 aa4.66□□□□□ -1.66
VTA1-204ENST00000491881 STARD3Q14849 445 aa4.66□□□□□ -1.66
VTA1-204ENST00000491881 NPY5RQ15761 445 aa4.66□□□□□ -1.66
VTA1-204ENST00000491881 PRR16Q569H4 304 aa4.66□□□□□ -1.66
VTA1-204ENST00000491881 ZNF362Q5T0B9 420 aaPredicted RBP4.66□□□□□ -1.66
VTA1-204ENST00000491881 PLAG1Q6DJT9 500 aa4.66□□□□□ -1.66
VTA1-204ENST00000491881 FCRL6Q6DN72 434 aa4.66□□□□□ -1.66
VTA1-204ENST00000491881 MZT2AQ6P582 158 aa4.66□□□□□ -1.66
VTA1-204ENST00000491881 VWA1Q6PCB0 445 aa4.66□□□□□ -1.66
VTA1-204ENST00000491881 TSHZ1Q6ZSZ6 1077 aa4.66□□□□□ -1.66
VTA1-204ENST00000491881 MYLK4Q86YV6 388 aaPredicted RBP4.66□□□□□ -1.66
VTA1-204ENST00000491881 FAM109AQ8N4B1 249 aa4.66□□□□□ -1.66
VTA1-204ENST00000491881 ENAHQ8N8S7 591 aaPredicted RBP4.66□□□□□ -1.66
VTA1-204ENST00000491881 TMEM171Q8WVE6 324 aa4.66□□□□□ -1.66
VTA1-204ENST00000491881 OSCP1Q8WVF1 389 aa4.66□□□□□ -1.66
VTA1-204ENST00000491881 ATG4AQ8WYN0 398 aa4.66□□□□□ -1.66
VTA1-204ENST00000491881 FKBP10Q96AY3 582 aa4.66□□□□□ -1.66
VTA1-204ENST00000491881 COQ10AQ96MF6 247 aa4.66□□□□□ -1.66
VTA1-204ENST00000491881 GBA2Q9HCG7 927 aaPredicted RBP4.66□□□□□ -1.66
VTA1-204ENST00000491881 DNMT3BQ9UBC3 853 aaKnown RBP4.66□□□□□ -1.66
VTA1-204ENST00000491881 CDC23Q9UJX2 597 aa4.66□□□□□ -1.66
VTA1-204ENST00000491881 MAGED2Q9UNF1 606 aaPredicted RBP4.66□□□□□ -1.66
VTA1-204ENST00000491881 SSX2IPQ9Y2D8 614 aa4.66□□□□□ -1.66
VTA1-204ENST00000491881 MAN2B2Q9Y2E5 1009 aa4.66□□□□□ -1.66
VTA1-204ENST00000491881 EPN1Q9Y6I3 576 aaPredicted RBP4.66□□□□□ -1.66
VTA1-204ENST00000491881 F5H423 210 aaPredicted RBP4.65□□□□□ -1.67
VTA1-204ENST00000491881 PODXLO00592 558 aa4.65□□□□□ -1.67
VTA1-204ENST00000491881 PROM1O43490 865 aa4.65□□□□□ -1.67
VTA1-204ENST00000491881 TLR5O60602 858 aa4.65□□□□□ -1.67
VTA1-204ENST00000491881 CSF1RP07333 972 aa4.65□□□□□ -1.67
VTA1-204ENST00000491881 RHOP08100 348 aa4.65□□□□□ -1.67
VTA1-204ENST00000491881 PDHA1P08559 390 aa4.65□□□□□ -1.67
VTA1-204ENST00000491881 ADORA2AP29274 412 aa4.65□□□□□ -1.67
VTA1-204ENST00000491881 PTH2RP49190 550 aa4.65□□□□□ -1.67
VTA1-204ENST00000491881 MTHFSP49914 203 aa4.65□□□□□ -1.67
VTA1-204ENST00000491881 HNRNPMP52272 730 aaKnown RBP eCLIP4.65□□□□□ -1.67
VTA1-204ENST00000491881 COPAP53621 1224 aa4.65□□□□□ -1.67
VTA1-204ENST00000491881 SEC24CP53992 1094 aa4.65□□□□□ -1.67
VTA1-204ENST00000491881 ELLP55199 621 aaPredicted RBP4.65□□□□□ -1.67
VTA1-204ENST00000491881 CHAF1AQ13111 956 aaPredicted RBP4.65□□□□□ -1.67
VTA1-204ENST00000491881 CCNIQ14094 377 aa4.65□□□□□ -1.67
VTA1-204ENST00000491881 KCNAB1Q14722 419 aa4.65□□□□□ -1.67
VTA1-204ENST00000491881 TBCCQ15814 346 aa4.65□□□□□ -1.67
VTA1-204ENST00000491881 MPEG1Q2M385 716 aa4.65□□□□□ -1.67
VTA1-204ENST00000491881 ZNF750Q32MQ0 723 aa4.65□□□□□ -1.67
VTA1-204ENST00000491881 PTCHD3Q3KNS1 767 aa4.65□□□□□ -1.67
VTA1-204ENST00000491881 C10orf62Q5T681 223 aaPredicted RBP4.65□□□□□ -1.67
VTA1-204ENST00000491881 SYTL1Q8IYJ3 562 aa4.65□□□□□ -1.67
VTA1-204ENST00000491881 VGLL2Q8N8G2 317 aa4.65□□□□□ -1.67
VTA1-204ENST00000491881 BOLLQ8N9W6 283 aaKnown RBP4.65□□□□□ -1.67
VTA1-204ENST00000491881 ATRIPQ8WXE1 791 aa4.65□□□□□ -1.67
VTA1-204ENST00000491881 ZNF668Q96K58 619 aaPredicted RBP4.65□□□□□ -1.67
VTA1-204ENST00000491881 ALG8Q9BVK2 526 aa4.65□□□□□ -1.67
VTA1-204ENST00000491881 GLOD4Q9HC38 313 aa4.65□□□□□ -1.67
VTA1-204ENST00000491881 HNRNPDLO14979 420 aaKnown RBP4.64□□□□□ -1.67
VTA1-204ENST00000491881 NXPH3O95157 252 aa4.64□□□□□ -1.67
VTA1-204ENST00000491881 NDST3O95803 873 aa4.64□□□□□ -1.67
VTA1-204ENST00000491881 C1RP00736 705 aa4.64□□□□□ -1.67
VTA1-204ENST00000491881 FOLR3P41439 243 aa4.64□□□□□ -1.67
VTA1-204ENST00000491881 MRPS35P82673 323 aaKnown RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms