RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 TMC2Q8TDI7 906 aa9.31□□□□□ -0.92
NUP50-217ENST00000491860 SH3RF2Q8TEC5 729 aa9.31□□□□□ -0.92
NUP50-217ENST00000491860 GAB3Q8WWW8 586 aa9.31□□□□□ -0.92
NUP50-217ENST00000491860 FOXD4L4Q8WXT5 416 aaPredicted RBP9.31□□□□□ -0.92
NUP50-217ENST00000491860 OTUB2Q96DC9 234 aa9.31□□□□□ -0.92
NUP50-217ENST00000491860 SMARCD1Q96GM5 515 aa9.31□□□□□ -0.92
NUP50-217ENST00000491860 PAGE5Q96GU1 130 aa9.31□□□□□ -0.92
NUP50-217ENST00000491860 SPATA32Q96LK8 384 aa9.31□□□□□ -0.92
NUP50-217ENST00000491860 DUSP9Q99956 384 aaKnown RBP9.31□□□□□ -0.92
NUP50-217ENST00000491860 MRPL45Q9BRJ2 306 aaKnown RBP9.31□□□□□ -0.92
NUP50-217ENST00000491860 XYLT2Q9H1B5 865 aa9.31□□□□□ -0.92
NUP50-217ENST00000491860 FBXO44Q9H4M3 255 aa9.31□□□□□ -0.92
NUP50-217ENST00000491860 DMAC2Q9NW81 257 aa9.31□□□□□ -0.92
NUP50-217ENST00000491860 TBC1D14Q9P2M4 693 aa9.31□□□□□ -0.92
NUP50-217ENST00000491860 NXF1Q9UBU9 619 aaKnown RBP9.31□□□□□ -0.92
NUP50-217ENST00000491860 EBF1Q9UH73 591 aa9.31□□□□□ -0.92
NUP50-217ENST00000491860 PCDHGA5Q9Y5G8 931 aa9.31□□□□□ -0.92
NUP50-217ENST00000491860 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.3□□□□□ -0.92
NUP50-217ENST00000491860 F8VP50 259 aa9.3□□□□□ -0.92
NUP50-217ENST00000491860 LEFTY2O00292 366 aa9.3□□□□□ -0.92
NUP50-217ENST00000491860 HRO43593 1189 aa9.3□□□□□ -0.92
NUP50-217ENST00000491860 ACTN4O43707 911 aaKnown RBP9.3□□□□□ -0.92
NUP50-217ENST00000491860 RNF40O75150 1001 aa9.3□□□□□ -0.92
NUP50-217ENST00000491860 RPP40O75818 363 aaKnown RBP9.3□□□□□ -0.92
NUP50-217ENST00000491860 APBB3O95704 486 aa9.3□□□□□ -0.92
NUP50-217ENST00000491860 OLFM2O95897 454 aa9.3□□□□□ -0.92
NUP50-217ENST00000491860 ADH1CP00326 375 aa9.3□□□□□ -0.92
NUP50-217ENST00000491860 OAS1P00973 400 aaKnown RBP9.3□□□□□ -0.92
NUP50-217ENST00000491860 ARSAP15289 507 aa9.3□□□□□ -0.92
NUP50-217ENST00000491860 PFKFB1P16118 471 aa9.3□□□□□ -0.92
NUP50-217ENST00000491860 RPL13P26373 211 aaKnown RBP9.3□□□□□ -0.92
NUP50-217ENST00000491860 SYKP43405 635 aa9.3□□□□□ -0.92
NUP50-217ENST00000491860 GALK1P51570 392 aa9.3□□□□□ -0.92
NUP50-217ENST00000491860 CDR1P51861 262 aa9.3□□□□□ -0.92
NUP50-217ENST00000491860 DNM1Q05193 864 aaKnown RBP9.3□□□□□ -0.92
NUP50-217ENST00000491860 STK4Q13043 487 aa9.3□□□□□ -0.92
NUP50-217ENST00000491860 FOXD4L6Q3SYB3 417 aaPredicted RBP9.3□□□□□ -0.92
NUP50-217ENST00000491860 KMT5BQ4FZB7 885 aa9.3□□□□□ -0.92
NUP50-217ENST00000491860 SNX30Q5VWJ9 437 aa9.3□□□□□ -0.92
NUP50-217ENST00000491860 FOXD4L3Q6VB84 417 aaPredicted RBP9.3□□□□□ -0.92
NUP50-217ENST00000491860 INTS8Q75QN2 995 aaKnown RBP9.3□□□□□ -0.92
NUP50-217ENST00000491860 TTC39CQ8N584 583 aa9.3□□□□□ -0.92
NUP50-217ENST00000491860 ARL14EPQ8N8R7 260 aaPredicted RBP9.3□□□□□ -0.92
NUP50-217ENST00000491860 FAXDC2Q96IV6 333 aa9.3□□□□□ -0.92
NUP50-217ENST00000491860 CYP2S1Q96SQ9 504 aa9.3□□□□□ -0.92
NUP50-217ENST00000491860 MED10Q9BTT4 135 aa9.3□□□□□ -0.92
NUP50-217ENST00000491860 GTPBP4Q9BZE4 634 aaKnown RBP9.3□□□□□ -0.92
NUP50-217ENST00000491860 FAM124BQ9H5Z6 455 aaPredicted RBP9.3□□□□□ -0.92
NUP50-217ENST00000491860 DMAP1Q9NPF5 467 aaPredicted RBP9.3□□□□□ -0.92
NUP50-217ENST00000491860 SERTAD1Q9UHV2 236 aa9.3□□□□□ -0.92
NUP50-217ENST00000491860 TRAF3IP3Q9Y228 551 aa9.3□□□□□ -0.92
NUP50-217ENST00000491860 WNT6Q9Y6F9 365 aa9.3□□□□□ -0.92
NUP50-217ENST00000491860 MYH10P35580 1976 aa9.3□□□□□ -0.92
NUP50-217ENST00000491860 ATG2BQ96BY7 2078 aa9.29□□□□□ -0.92
NUP50-217ENST00000491860 FAM237AA0A1B0GTK4 181 aa9.29□□□□□ -0.92
NUP50-217ENST00000491860 A0A1W2PQ27 194 aa9.29□□□□□ -0.92
NUP50-217ENST00000491860 A0A1W2PQ64 194 aa9.29□□□□□ -0.92
NUP50-217ENST00000491860 A0A1W2PQD8 194 aa9.29□□□□□ -0.92
NUP50-217ENST00000491860 E2F8A0AVK6 867 aa9.29□□□□□ -0.92
NUP50-217ENST00000491860 C2orf78A6NCI8 922 aa9.29□□□□□ -0.92
NUP50-217ENST00000491860 OTOL1A6NHN0 477 aaPredicted RBP9.29□□□□□ -0.92
NUP50-217ENST00000491860 LRRIQ3A6PVS8 624 aaPredicted RBP9.29□□□□□ -0.92
NUP50-217ENST00000491860 AXIN1O15169 862 aa9.29□□□□□ -0.92
NUP50-217ENST00000491860 HCRTO43612 131 aa9.29□□□□□ -0.92
NUP50-217ENST00000491860 KLRC4O43908 158 aa9.29□□□□□ -0.92
NUP50-217ENST00000491860 ALDH1A2O94788 518 aa9.29□□□□□ -0.92
NUP50-217ENST00000491860 RHOBTB1O94844 696 aa9.29□□□□□ -0.92
NUP50-217ENST00000491860 EPN2O95208 641 aa9.29□□□□□ -0.92
NUP50-217ENST00000491860 ABL1P00519 1130 aa9.29□□□□□ -0.92
NUP50-217ENST00000491860 EGFP01133 1207 aa9.29□□□□□ -0.92
NUP50-217ENST00000491860 C4BPAP04003 597 aaKnown RBP9.29□□□□□ -0.92
NUP50-217ENST00000491860 NR3C1P04150 777 aa9.29□□□□□ -0.92
NUP50-217ENST00000491860 MBL2P11226 248 aaPredicted RBP9.29□□□□□ -0.92
NUP50-217ENST00000491860 KRT13P13646 458 aa9.29□□□□□ -0.92
NUP50-217ENST00000491860 LIMK1P53667 647 aa9.29□□□□□ -0.92
NUP50-217ENST00000491860 MRPS21P82921 87 aaKnown RBP9.29□□□□□ -0.92
NUP50-217ENST00000491860 GOLGA8FQ08AF8 430 aa9.29□□□□□ -0.92
NUP50-217ENST00000491860 GOLGA8DPQ0D2H9 430 aa9.29□□□□□ -0.92
NUP50-217ENST00000491860 SPEM2Q0P670 501 aa9.29□□□□□ -0.92
NUP50-217ENST00000491860 TAF10Q12962 218 aa9.29□□□□□ -0.92
NUP50-217ENST00000491860 BYSLQ13895 437 aaKnown RBP9.29□□□□□ -0.92
NUP50-217ENST00000491860 ELF2Q15723 593 aa9.29□□□□□ -0.92
NUP50-217ENST00000491860 ZACNQ401N2 412 aa9.29□□□□□ -0.92
NUP50-217ENST00000491860 WDR44Q5JSH3 913 aa9.29□□□□□ -0.92
NUP50-217ENST00000491860 HECTD3Q5T447 861 aa9.29□□□□□ -0.92
NUP50-217ENST00000491860 HEATR6Q6AI08 1181 aaKnown RBP9.29□□□□□ -0.92
NUP50-217ENST00000491860 PRR23CQ6ZRP0 262 aa9.29□□□□□ -0.92
NUP50-217ENST00000491860 TRMT11Q7Z4G4 463 aaKnown RBP9.29□□□□□ -0.92
NUP50-217ENST00000491860 TADA2BQ86TJ2 420 aa9.29□□□□□ -0.92
NUP50-217ENST00000491860 FAM160A2Q8N612 972 aaPredicted RBP9.29□□□□□ -0.92
NUP50-217ENST00000491860 C12orf50Q8NA57 414 aaPredicted RBP9.29□□□□□ -0.92
NUP50-217ENST00000491860 KIAA0895Q8NCT3 520 aa9.29□□□□□ -0.92
NUP50-217ENST00000491860 TTC16Q8NEE8 873 aa9.29□□□□□ -0.92
NUP50-217ENST00000491860 ZNF516Q92618 1163 aa9.29□□□□□ -0.92
NUP50-217ENST00000491860 FBXO32Q969P5 355 aa9.29□□□□□ -0.92
NUP50-217ENST00000491860 ZC3H10Q96K80 434 aaKnown RBP9.29□□□□□ -0.92
NUP50-217ENST00000491860 FAM84AQ96KN4 292 aa9.29□□□□□ -0.92
NUP50-217ENST00000491860 SLC22A12Q96S37 553 aa9.29□□□□□ -0.92
NUP50-217ENST00000491860 NACA2Q9H009 215 aa9.29□□□□□ -0.92
NUP50-217ENST00000491860 KCTD10Q9H3F6 313 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms