RNA–Protein interactions for RNA: ENST00000491802.1

CPNE9-204, Transcript of copine family member 9, humanhuman

TSL 4

Gene CPNE9, Length 584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-204ENST00000491802 PAEPP09466 180 aa24.58■■□□□ 1.53
CPNE9-204ENST00000491802 VDRP11473 427 aa24.58■■□□□ 1.53
CPNE9-204ENST00000491802 KRT5P13647 590 aa24.58■■□□□ 1.53
CPNE9-204ENST00000491802 AVPR1AP37288 418 aa24.58■■□□□ 1.53
CPNE9-204ENST00000491802 PFKPQ01813 784 aa24.58■■□□□ 1.53
CPNE9-204ENST00000491802 GRM2Q14416 872 aa24.58■■□□□ 1.53
CPNE9-204ENST00000491802 GPRIN1Q7Z2K8 1008 aa24.58■■□□□ 1.53
CPNE9-204ENST00000491802 CMTM8Q8IZV2 173 aa24.58■■□□□ 1.53
CPNE9-204ENST00000491802 FBXO32Q969P5 355 aa24.58■■□□□ 1.53
CPNE9-204ENST00000491802 BPIFA3Q9BQP9 254 aa24.58■■□□□ 1.53
CPNE9-204ENST00000491802 SMG9Q9H0W8 520 aaKnown RBP24.58■■□□□ 1.53
CPNE9-204ENST00000491802 VPS16Q9H269 839 aa24.58■■□□□ 1.53
CPNE9-204ENST00000491802 PNPLA8Q9NP80 782 aa24.58■■□□□ 1.53
CPNE9-204ENST00000491802 SIX2Q9NPC8 291 aa24.58■■□□□ 1.53
CPNE9-204ENST00000491802 TSPAN16Q9UKR8 245 aa24.58■■□□□ 1.53
CPNE9-204ENST00000491802 ARIH1Q9Y4X5 557 aaPredicted RBP24.58■■□□□ 1.53
CPNE9-204ENST00000491802 COL4A2P08572 1712 aa24.58■■□□□ 1.52
CPNE9-204ENST00000491802 HHLA1C9JL84 531 aa24.57■■□□□ 1.52
CPNE9-204ENST00000491802 TPM2P07951 284 aa24.57■■□□□ 1.52
CPNE9-204ENST00000491802 ZNF132P52740 706 aa24.57■■□□□ 1.52
CPNE9-204ENST00000491802 MFAP3P55082 362 aa24.57■■□□□ 1.52
CPNE9-204ENST00000491802 GPC5P78333 572 aa24.57■■□□□ 1.52
CPNE9-204ENST00000491802 SKOR2Q2VWA4 1001 aaPredicted RBP24.57■■□□□ 1.52
CPNE9-204ENST00000491802 ANKRD20A12PQ8NF67 263 aa24.57■■□□□ 1.52
CPNE9-204ENST00000491802 FAM81BQ96LP2 452 aa24.57■■□□□ 1.52
CPNE9-204ENST00000491802 KCNH6Q9H252 994 aa24.57■■□□□ 1.52
CPNE9-204ENST00000491802 TRPV5Q9NQA5 729 aa24.57■■□□□ 1.52
CPNE9-204ENST00000491802 FBXL21Q9UKT6 434 aa24.57■■□□□ 1.52
CPNE9-204ENST00000491802 TRAV19A0A0A6YYK7 116 aa24.56■■□□□ 1.52
CPNE9-204ENST00000491802 C2orf78A6NCI8 922 aa24.56■■□□□ 1.52
CPNE9-204ENST00000491802 ZNF840PA6NDX5 716 aa24.56■■□□□ 1.52
CPNE9-204ENST00000491802 RNF225M0QZC1 329 aaPredicted RBP24.56■■□□□ 1.52
CPNE9-204ENST00000491802 O00370 1275 aa24.56■■□□□ 1.52
CPNE9-204ENST00000491802 DPYSL4O14531 572 aa24.56■■□□□ 1.52
CPNE9-204ENST00000491802 ZNF18P17022 549 aa24.56■■□□□ 1.52
CPNE9-204ENST00000491802 PFKLP17858 780 aa24.56■■□□□ 1.52
CPNE9-204ENST00000491802 PSMC3P17980 439 aa24.56■■□□□ 1.52
CPNE9-204ENST00000491802 PPP3CCP48454 512 aa24.56■■□□□ 1.52
CPNE9-204ENST00000491802 ARHGAP44Q17R89 818 aa24.56■■□□□ 1.52
CPNE9-204ENST00000491802 TTC30AQ86WT1 665 aa24.56■■□□□ 1.52
CPNE9-204ENST00000491802 MFSD6LQ8IWD5 586 aa24.56■■□□□ 1.52
CPNE9-204ENST00000491802 SUGP1Q8IWZ8 645 aaKnown RBP24.56■■□□□ 1.52
CPNE9-204ENST00000491802 ANKRD52Q8NB46 1076 aa24.56■■□□□ 1.52
CPNE9-204ENST00000491802 PDZD8Q8NEN9 1154 aa24.56■■□□□ 1.52
CPNE9-204ENST00000491802 DNASE1L2Q92874 299 aa24.56■■□□□ 1.52
CPNE9-204ENST00000491802 COMMD8Q9NX08 183 aa24.56■■□□□ 1.52
CPNE9-204ENST00000491802 IL37Q9NZH6 218 aa24.56■■□□□ 1.52
CPNE9-204ENST00000491802 HESX1Q9UBX0 185 aa24.56■■□□□ 1.52
CPNE9-204ENST00000491802 AJAP1Q9UKB5 411 aaPredicted RBP24.56■■□□□ 1.52
CPNE9-204ENST00000491802 KIAA1257Q9ULG3 409 aa24.56■■□□□ 1.52
CPNE9-204ENST00000491802 ABL1P00519 1130 aa24.55■■□□□ 1.52
CPNE9-204ENST00000491802 CALCAP01258 141 aa24.55■■□□□ 1.52
CPNE9-204ENST00000491802 CKMP06732 381 aa24.55■■□□□ 1.52
CPNE9-204ENST00000491802 BRD2P25440 801 aaKnown RBP24.55■■□□□ 1.52
CPNE9-204ENST00000491802 ZNF165P49910 485 aa24.55■■□□□ 1.52
CPNE9-204ENST00000491802 CLCN5P51795 746 aa24.55■■□□□ 1.52
CPNE9-204ENST00000491802 NUBP1P53384 320 aa24.55■■□□□ 1.52
CPNE9-204ENST00000491802 BCAT1P54687 386 aa24.55■■□□□ 1.52
CPNE9-204ENST00000491802 SLC8A3P57103 927 aa24.55■■□□□ 1.52
CPNE9-204ENST00000491802 FCHO2Q0JRZ9 810 aa24.55■■□□□ 1.52
CPNE9-204ENST00000491802 OVCA2Q8WZ82 227 aa24.55■■□□□ 1.52
CPNE9-204ENST00000491802 TFAP2BQ92481 460 aa24.55■■□□□ 1.52
CPNE9-204ENST00000491802 SLC22A12Q96S37 553 aa24.55■■□□□ 1.52
CPNE9-204ENST00000491802 TRMT61BQ9BVS5 477 aaKnown RBP24.55■■□□□ 1.52
CPNE9-204ENST00000491802 HSD3B7Q9H2F3 369 aa24.55■■□□□ 1.52
CPNE9-204ENST00000491802 FBXO44Q9H4M3 255 aa24.55■■□□□ 1.52
CPNE9-204ENST00000491802 GMIPQ9P107 970 aa24.55■■□□□ 1.52
CPNE9-204ENST00000491802 LIMA1Q9UHB6 759 aaKnown RBP24.55■■□□□ 1.52
CPNE9-204ENST00000491802 CNTN6Q9UQ52 1028 aa24.55■■□□□ 1.52
CPNE9-204ENST00000491802 FAM92AA1XBS5 289 aa24.54■■□□□ 1.52
CPNE9-204ENST00000491802 PDGFBP01127 241 aaPredicted RBP24.54■■□□□ 1.52
CPNE9-204ENST00000491802 COL9A1P20849 921 aa24.54■■□□□ 1.52
CPNE9-204ENST00000491802 COPB1P53618 953 aaKnown RBP24.54■■□□□ 1.52
CPNE9-204ENST00000491802 KCNMA1Q12791 1236 aa24.54■■□□□ 1.52
CPNE9-204ENST00000491802 ZNF268Q14587 947 aaPredicted RBP24.54■■□□□ 1.52
CPNE9-204ENST00000491802 ZSCAN23Q3MJ62 389 aa24.54■■□□□ 1.52
CPNE9-204ENST00000491802 DHX40Q8IX18 779 aaKnown RBP24.54■■□□□ 1.52
CPNE9-204ENST00000491802 SIX5Q8N196 739 aa24.54■■□□□ 1.52
CPNE9-204ENST00000491802 ARL14EPQ8N8R7 260 aaPredicted RBP24.54■■□□□ 1.52
CPNE9-204ENST00000491802 USP13Q92995 863 aaPredicted RBP24.54■■□□□ 1.52
CPNE9-204ENST00000491802 LSM14BQ9BX40 385 aaKnown RBP24.54■■□□□ 1.52
CPNE9-204ENST00000491802 ARHGEF3Q9NR81 526 aa24.54■■□□□ 1.52
CPNE9-204ENST00000491802 CA14Q9ULX7 337 aa24.54■■□□□ 1.52
CPNE9-204ENST00000491802 CCL26Q9Y258 94 aa24.54■■□□□ 1.52
CPNE9-204ENST00000491802 HELZP42694 1942 aaKnown RBP24.54■■□□□ 1.52
CPNE9-204ENST00000491802 KRBA1A5PL33 1030 aa24.53■■□□□ 1.52
CPNE9-204ENST00000491802 USP17L7P0C7H9 530 aa24.53■■□□□ 1.52
CPNE9-204ENST00000491802 CDK11BP21127 795 aaKnown RBP24.53■■□□□ 1.52
CPNE9-204ENST00000491802 GDI1P31150 447 aa24.53■■□□□ 1.52
CPNE9-204ENST00000491802 PDE6CP51160 858 aa24.53■■□□□ 1.52
CPNE9-204ENST00000491802 BST2Q10589 180 aaKnown RBP24.53■■□□□ 1.52
CPNE9-204ENST00000491802 PIGZQ86VD9 579 aa24.53■■□□□ 1.52
CPNE9-204ENST00000491802 YAF2Q8IY57 180 aa24.53■■□□□ 1.52
CPNE9-204ENST00000491802 CELF5Q8N6W0 485 aaKnown RBP24.53■■□□□ 1.52
CPNE9-204ENST00000491802 SHC3Q92529 594 aa24.53■■□□□ 1.52
CPNE9-204ENST00000491802 IRF7Q92985 503 aa24.53■■□□□ 1.52
CPNE9-204ENST00000491802 LRRC3BQ96PB8 259 aa24.53■■□□□ 1.52
CPNE9-204ENST00000491802 CYP2S1Q96SQ9 504 aa24.53■■□□□ 1.52
CPNE9-204ENST00000491802 ZSWIM1Q9BR11 485 aa24.53■■□□□ 1.52
CPNE9-204ENST00000491802 BRD9Q9H8M2 597 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms