RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 ZRSR1Q15695 479 aaKnown RBP11.95□□□□□ -0.5
CLCNKA-206ENST00000491433 DDR2Q16832 855 aa11.95□□□□□ -0.5
CLCNKA-206ENST00000491433 MAP7D1Q3KQU3 841 aa11.95□□□□□ -0.5
CLCNKA-206ENST00000491433 CFAP221Q4G0U5 840 aa11.95□□□□□ -0.5
CLCNKA-206ENST00000491433 INTS6LQ5JSJ4 861 aaKnown RBP11.95□□□□□ -0.5
CLCNKA-206ENST00000491433 TMEM92Q6UXU6 159 aa11.95□□□□□ -0.5
CLCNKA-206ENST00000491433 C4orf50Q6ZRC1 276 aa11.95□□□□□ -0.5
CLCNKA-206ENST00000491433 KCNK18Q7Z418 384 aa11.95□□□□□ -0.5
CLCNKA-206ENST00000491433 DDX42Q86XP3 938 aaKnown RBP eCLIP11.95□□□□□ -0.5
CLCNKA-206ENST00000491433 MINDY1Q8N5J2 469 aa11.95□□□□□ -0.5
CLCNKA-206ENST00000491433 ALLCQ8N6M5 410 aa11.95□□□□□ -0.5
CLCNKA-206ENST00000491433 IL17RCQ8NAC3 791 aa11.95□□□□□ -0.5
CLCNKA-206ENST00000491433 HMGB4Q8WW32 186 aa11.95□□□□□ -0.5
CLCNKA-206ENST00000491433 LINC00597Q9H2U6 94 aa11.95□□□□□ -0.5
CLCNKA-206ENST00000491433 CAPN10Q9HC96 672 aa11.95□□□□□ -0.5
CLCNKA-206ENST00000491433 DDX43Q9NXZ2 648 aaKnown RBP11.95□□□□□ -0.5
CLCNKA-206ENST00000491433 TRPM5Q9NZQ8 1165 aa11.95□□□□□ -0.5
CLCNKA-206ENST00000491433 SUSD2Q9UGT4 822 aa11.95□□□□□ -0.5
CLCNKA-206ENST00000491433 MBD1Q9UIS9 605 aaPredicted RBP11.95□□□□□ -0.5
CLCNKA-206ENST00000491433 COL6A6A6NMZ7 2263 aa11.95□□□□□ -0.5
CLCNKA-206ENST00000491433 ATXN2Q99700 1313 aaKnown RBP11.94□□□□□ -0.5
CLCNKA-206ENST00000491433 A0A1W2PQD8 194 aa11.94□□□□□ -0.5
CLCNKA-206ENST00000491433 TCRBV21S2A2A0A5A6 115 aa11.94□□□□□ -0.5
CLCNKA-206ENST00000491433 PP2D1A8MPX8 630 aa11.94□□□□□ -0.5
CLCNKA-206ENST00000491433 ZNF217O75362 1048 aa11.94□□□□□ -0.5
CLCNKA-206ENST00000491433 FAM13AO94988 1023 aa11.94□□□□□ -0.5
CLCNKA-206ENST00000491433 KAT7O95251 611 aa11.94□□□□□ -0.5
CLCNKA-206ENST00000491433 CYP2F1P24903 491 aa11.94□□□□□ -0.5
CLCNKA-206ENST00000491433 TIE1P35590 1138 aa11.94□□□□□ -0.5
CLCNKA-206ENST00000491433 GRIA2P42262 883 aa11.94□□□□□ -0.5
CLCNKA-206ENST00000491433 MAGEA11P43364 429 aa11.94□□□□□ -0.5
CLCNKA-206ENST00000491433 GPR15P49685 360 aa11.94□□□□□ -0.5
CLCNKA-206ENST00000491433 CDR1P51861 262 aa11.94□□□□□ -0.5
CLCNKA-206ENST00000491433 RESTQ13127 1097 aa11.94□□□□□ -0.5
CLCNKA-206ENST00000491433 POSTNQ15063 836 aa11.94□□□□□ -0.5
CLCNKA-206ENST00000491433 RABEP1Q15276 862 aa11.94□□□□□ -0.5
CLCNKA-206ENST00000491433 ADALQ6DHV7 355 aa11.94□□□□□ -0.5
CLCNKA-206ENST00000491433 MYCT1Q8N699 235 aa11.94□□□□□ -0.5
CLCNKA-206ENST00000491433 ZNF513Q8N8E2 541 aaPredicted RBP11.94□□□□□ -0.5
CLCNKA-206ENST00000491433 FAM184AQ8NB25 1140 aa11.94□□□□□ -0.5
CLCNKA-206ENST00000491433 CACTINQ8WUQ7 758 aaKnown RBP11.94□□□□□ -0.5
CLCNKA-206ENST00000491433 FCRL3Q96P31 734 aaPredicted RBP11.94□□□□□ -0.5
CLCNKA-206ENST00000491433 DCBLD2Q96PD2 775 aa11.94□□□□□ -0.5
CLCNKA-206ENST00000491433 SLC22A12Q96S37 553 aa11.94□□□□□ -0.5
CLCNKA-206ENST00000491433 MMTAG2Q9BU76 263 aaKnown RBP11.94□□□□□ -0.5
CLCNKA-206ENST00000491433 FAM124BQ9H5Z6 455 aaPredicted RBP11.94□□□□□ -0.5
CLCNKA-206ENST00000491433 PARVGQ9HBI0 331 aa11.94□□□□□ -0.5
CLCNKA-206ENST00000491433 TMLHEQ9NVH6 421 aa11.94□□□□□ -0.5
CLCNKA-206ENST00000491433 TBC1D14Q9P2M4 693 aa11.94□□□□□ -0.5
CLCNKA-206ENST00000491433 AGO2Q9UKV8 859 aaKnown RBP11.94□□□□□ -0.5
CLCNKA-206ENST00000491433 ITPR3Q14573 2671 aa11.94□□□□□ -0.5
CLCNKA-206ENST00000491433 PCDH15Q96QU1 1955 aa11.93□□□□□ -0.5
CLCNKA-206ENST00000491433 TEX51A0A1B0GUA7 166 aa11.93□□□□□ -0.5
CLCNKA-206ENST00000491433 C2orf78A6NCI8 922 aa11.93□□□□□ -0.5
CLCNKA-206ENST00000491433 B8ZZF3 427 aa11.93□□□□□ -0.5
CLCNKA-206ENST00000491433 SGK1O00141 431 aa11.93□□□□□ -0.5
CLCNKA-206ENST00000491433 LEFTY2O00292 366 aa11.93□□□□□ -0.5
CLCNKA-206ENST00000491433 TRAK2O60296 914 aa11.93□□□□□ -0.5
CLCNKA-206ENST00000491433 CYP17A1P05093 508 aa11.93□□□□□ -0.5
CLCNKA-206ENST00000491433 FTH1P19P0C7X4 201 aa11.93□□□□□ -0.5
CLCNKA-206ENST00000491433 CD59P13987 128 aa11.93□□□□□ -0.5
CLCNKA-206ENST00000491433 GNSP15586 552 aa11.93□□□□□ -0.5
CLCNKA-206ENST00000491433 ACOT2P49753 483 aa11.93□□□□□ -0.5
CLCNKA-206ENST00000491433 SLC7A9P82251 487 aa11.93□□□□□ -0.5
CLCNKA-206ENST00000491433 ZNF33AQ06730 810 aa11.93□□□□□ -0.5
CLCNKA-206ENST00000491433 NBR1Q14596 966 aa11.93□□□□□ -0.5
CLCNKA-206ENST00000491433 MAPRE1Q15691 268 aaKnown RBP11.93□□□□□ -0.5
CLCNKA-206ENST00000491433 SYCP2LQ5T4T6 812 aa11.93□□□□□ -0.5
CLCNKA-206ENST00000491433 SDHAF4Q5VUM1 108 aa11.93□□□□□ -0.5
CLCNKA-206ENST00000491433 VSTM1Q6UX27 236 aa11.93□□□□□ -0.5
CLCNKA-206ENST00000491433 SCN4BQ8IWT1 228 aa11.93□□□□□ -0.5
CLCNKA-206ENST00000491433 ADGRG2Q8IZP9 1017 aa11.93□□□□□ -0.5
CLCNKA-206ENST00000491433 SPATA17Q96L03 361 aa11.93□□□□□ -0.5
CLCNKA-206ENST00000491433 ZDHHC5Q9C0B5 715 aa11.93□□□□□ -0.5
CLCNKA-206ENST00000491433 ARHGEF4Q9NR80 690 aa11.93□□□□□ -0.5
CLCNKA-206ENST00000491433 GON4LQ3T8J9 2241 aa11.92□□□□□ -0.5
CLCNKA-206ENST00000491433 GP1BBP13224 206 aa11.92□□□□□ -0.5
CLCNKA-206ENST00000491433 ANXA13P27216 316 aa11.92□□□□□ -0.5
CLCNKA-206ENST00000491433 KIR2DL1P43626 348 aaPredicted RBP11.92□□□□□ -0.5
CLCNKA-206ENST00000491433 NEK4P51957 841 aa11.92□□□□□ -0.5
CLCNKA-206ENST00000491433 GTF2BQ00403 316 aa11.92□□□□□ -0.5
CLCNKA-206ENST00000491433 DHCR24Q15392 516 aa11.92□□□□□ -0.5
CLCNKA-206ENST00000491433 ZC2HC1CQ53FD0 456 aaPredicted RBP11.92□□□□□ -0.5
CLCNKA-206ENST00000491433 BTBD8Q5XKL5 378 aa11.92□□□□□ -0.5
CLCNKA-206ENST00000491433 SDE2Q6IQ49 451 aa11.92□□□□□ -0.5
CLCNKA-206ENST00000491433 DPH6Q7L8W6 267 aa11.92□□□□□ -0.5
CLCNKA-206ENST00000491433 FILIP1Q7Z7B0 1213 aa11.92□□□□□ -0.5
CLCNKA-206ENST00000491433 PDCL2Q8N4E4 241 aa11.92□□□□□ -0.5
CLCNKA-206ENST00000491433 LRRC52Q8N7C0 313 aa11.92□□□□□ -0.5
CLCNKA-206ENST00000491433 STKLD1Q8NE28 680 aa11.92□□□□□ -0.5
CLCNKA-206ENST00000491433 FOXJ1Q92949 421 aa11.92□□□□□ -0.5
CLCNKA-206ENST00000491433 OTUB2Q96DC9 234 aa11.92□□□□□ -0.5
CLCNKA-206ENST00000491433 KIAA1522Q9P206 1035 aaPredicted RBP11.92□□□□□ -0.5
CLCNKA-206ENST00000491433 MAGEC2Q9UBF1 373 aaPredicted RBP11.92□□□□□ -0.5
CLCNKA-206ENST00000491433 NXF1Q9UBU9 619 aaKnown RBP11.92□□□□□ -0.5
CLCNKA-206ENST00000491433 GTF3C4Q9UKN8 822 aa11.92□□□□□ -0.5
CLCNKA-206ENST00000491433 R3HCC1Q9Y3T6 440 aaKnown RBP11.92□□□□□ -0.5
CLCNKA-206ENST00000491433 PCDHB6Q9Y5E3 794 aa11.92□□□□□ -0.5
CLCNKA-206ENST00000491433 STYXL1Q9Y6J8 313 aa11.92□□□□□ -0.5
CLCNKA-206ENST00000491433 TBC1D3BA6NDS4 549 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms