RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 EXOC1Q9NV70 894 aa16.73■□□□□ 0.27
SMPD4-220ENST00000491319 A0A1B0GVL5 298 aa16.72■□□□□ 0.27
SMPD4-220ENST00000491319 SCAMP3O14828 347 aaKnown RBP16.72■□□□□ 0.27
SMPD4-220ENST00000491319 RPP40O75818 363 aaKnown RBP16.72■□□□□ 0.27
SMPD4-220ENST00000491319 NFATC1O95644 943 aa16.72■□□□□ 0.27
SMPD4-220ENST00000491319 OLFM2O95897 454 aa16.72■□□□□ 0.27
SMPD4-220ENST00000491319 ABL1P00519 1130 aa16.72■□□□□ 0.27
SMPD4-220ENST00000491319 OAS1P00973 400 aaKnown RBP16.72■□□□□ 0.27
SMPD4-220ENST00000491319 FAM163BP0C2L3 166 aa16.72■□□□□ 0.27
SMPD4-220ENST00000491319 PFKFB1P16118 471 aa16.72■□□□□ 0.27
SMPD4-220ENST00000491319 PFKLP17858 780 aa16.72■□□□□ 0.27
SMPD4-220ENST00000491319 CDH8P55286 799 aa16.72■□□□□ 0.27
SMPD4-220ENST00000491319 TAF10Q12962 218 aa16.72■□□□□ 0.27
SMPD4-220ENST00000491319 PSMD2Q13200 908 aa16.72■□□□□ 0.27
SMPD4-220ENST00000491319 CSRP2Q16527 193 aa16.72■□□□□ 0.27
SMPD4-220ENST00000491319 FBXO43Q4G163 708 aa16.72■□□□□ 0.27
SMPD4-220ENST00000491319 GOLGA5Q8TBA6 731 aa16.72■□□□□ 0.27
SMPD4-220ENST00000491319 RTKNQ9BST9 563 aa16.72■□□□□ 0.27
SMPD4-220ENST00000491319 SDCBP2Q9H190 292 aa16.72■□□□□ 0.27
SMPD4-220ENST00000491319 VRTNQ9H8Y1 702 aa16.72■□□□□ 0.27
SMPD4-220ENST00000491319 SMPD4Q9NXE4 827 aa16.72■□□□□ 0.27
SMPD4-220ENST00000491319 EHD2Q9NZN4 543 aa16.72■□□□□ 0.27
SMPD4-220ENST00000491319 CPQQ9Y646 472 aa16.72■□□□□ 0.27
SMPD4-220ENST00000491319 CCDC163A0A0D9SF12 145 aa16.71■□□□□ 0.27
SMPD4-220ENST00000491319 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.71■□□□□ 0.27
SMPD4-220ENST00000491319 DCDC2BA2VCK2 349 aa16.71■□□□□ 0.27
SMPD4-220ENST00000491319 VNN1O95497 513 aa16.71■□□□□ 0.27
SMPD4-220ENST00000491319 C4BPAP04003 597 aaKnown RBP16.71■□□□□ 0.27
SMPD4-220ENST00000491319 CCDC192P0DO97 292 aa16.71■□□□□ 0.27
SMPD4-220ENST00000491319 OPRD1P41143 372 aa16.71■□□□□ 0.27
SMPD4-220ENST00000491319 DLG4P78352 724 aa16.71■□□□□ 0.27
SMPD4-220ENST00000491319 CLDN10P78369 228 aa16.71■□□□□ 0.27
SMPD4-220ENST00000491319 SLC7A9P82251 487 aa16.71■□□□□ 0.27
SMPD4-220ENST00000491319 NR1H3Q13133 447 aa16.71■□□□□ 0.27
SMPD4-220ENST00000491319 NCOA4Q13772 614 aa16.71■□□□□ 0.27
SMPD4-220ENST00000491319 GAB4Q2WGN9 574 aa16.71■□□□□ 0.27
SMPD4-220ENST00000491319 ZNF667Q5HYK9 610 aa16.71■□□□□ 0.27
SMPD4-220ENST00000491319 FAM35AQ86V20 835 aa16.71■□□□□ 0.27
SMPD4-220ENST00000491319 KBTBD6Q86V97 674 aa16.71■□□□□ 0.27
SMPD4-220ENST00000491319 EXOC4Q96A65 974 aa16.71■□□□□ 0.27
SMPD4-220ENST00000491319 SLITRK1Q96PX8 696 aa16.71■□□□□ 0.27
SMPD4-220ENST00000491319 KCTD10Q9H3F6 313 aa16.71■□□□□ 0.27
SMPD4-220ENST00000491319 DMAC2Q9NW81 257 aa16.71■□□□□ 0.27
SMPD4-220ENST00000491319 CEP192Q8TEP8 1941 aa16.7■□□□□ 0.26
SMPD4-220ENST00000491319 ANTXRLA6NF34 631 aa16.7■□□□□ 0.26
SMPD4-220ENST00000491319 GDF9O60383 454 aa16.7■□□□□ 0.26
SMPD4-220ENST00000491319 CYP17A1P05093 508 aa16.7■□□□□ 0.26
SMPD4-220ENST00000491319 PPP3CCP48454 512 aa16.7■□□□□ 0.26
SMPD4-220ENST00000491319 AP3M2P53677 418 aa16.7■□□□□ 0.26
SMPD4-220ENST00000491319 DMC1Q14565 340 aa16.7■□□□□ 0.26
SMPD4-220ENST00000491319 CCDC6Q16204 474 aa16.7■□□□□ 0.26
SMPD4-220ENST00000491319 SYT13Q7L8C5 426 aa16.7■□□□□ 0.26
SMPD4-220ENST00000491319 FILIP1Q7Z7B0 1213 aa16.7■□□□□ 0.26
SMPD4-220ENST00000491319 SLC9A9Q8IVB4 645 aa16.7■□□□□ 0.26
SMPD4-220ENST00000491319 NUP93Q8N1F7 819 aa16.7■□□□□ 0.26
SMPD4-220ENST00000491319 CAMKK1Q8N5S9 505 aa16.7■□□□□ 0.26
SMPD4-220ENST00000491319 NETO1Q8TDF5 533 aa16.7■□□□□ 0.26
SMPD4-220ENST00000491319 ACDQ96AP0 544 aa16.7■□□□□ 0.26
SMPD4-220ENST00000491319 KCNK16Q96T55 309 aa16.7■□□□□ 0.26
SMPD4-220ENST00000491319 PLXND1Q9Y4D7 1925 aa16.7■□□□□ 0.26
SMPD4-220ENST00000491319 CNOT1A5YKK6 2376 aaKnown RBP16.7■□□□□ 0.26
SMPD4-220ENST00000491319 TNRC6BQ9UPQ9 1833 aaKnown RBP16.69■□□□□ 0.26
SMPD4-220ENST00000491319 AXIN1O15169 862 aa16.69■□□□□ 0.26
SMPD4-220ENST00000491319 NR3C1P04150 777 aa16.69■□□□□ 0.26
SMPD4-220ENST00000491319 MBL2P11226 248 aaPredicted RBP16.69■□□□□ 0.26
SMPD4-220ENST00000491319 YWHAQP27348 245 aa16.69■□□□□ 0.26
SMPD4-220ENST00000491319 ORC1Q13415 861 aa16.69■□□□□ 0.26
SMPD4-220ENST00000491319 PAQR9Q6ZVX9 377 aa16.69■□□□□ 0.26
SMPD4-220ENST00000491319 CACNA2D4Q7Z3S7 1137 aa16.69■□□□□ 0.26
SMPD4-220ENST00000491319 SCAMP5Q8TAC9 235 aa16.69■□□□□ 0.26
SMPD4-220ENST00000491319 FBXO32Q969P5 355 aa16.69■□□□□ 0.26
SMPD4-220ENST00000491319 MED10Q9BTT4 135 aa16.69■□□□□ 0.26
SMPD4-220ENST00000491319 ARRDC1-AS1Q9H2J1 176 aa16.69■□□□□ 0.26
SMPD4-220ENST00000491319 KRT82Q9NSB4 513 aa16.69■□□□□ 0.26
SMPD4-220ENST00000491319 CFAP97Q9P2B7 532 aa16.69■□□□□ 0.26
SMPD4-220ENST00000491319 HMGXB4Q9UGU5 601 aa16.69■□□□□ 0.26
SMPD4-220ENST00000491319 HPSEQ9Y251 543 aa16.69■□□□□ 0.26
SMPD4-220ENST00000491319 ATP8B3O60423 1300 aa16.69■□□□□ 0.26
SMPD4-220ENST00000491319 PDXKO00764 312 aa16.68■□□□□ 0.26
SMPD4-220ENST00000491319 SLC30A4O14863 429 aa16.68■□□□□ 0.26
SMPD4-220ENST00000491319 RTN3O95197 1032 aaPredicted RBP16.68■□□□□ 0.26
SMPD4-220ENST00000491319 EPN2O95208 641 aa16.68■□□□□ 0.26
SMPD4-220ENST00000491319 PRR29P0C7W0 189 aa16.68■□□□□ 0.26
SMPD4-220ENST00000491319 CCDC130P13994 396 aa16.68■□□□□ 0.26
SMPD4-220ENST00000491319 CMA1P23946 247 aa16.68■□□□□ 0.26
SMPD4-220ENST00000491319 SLC5A3P53794 718 aa16.68■□□□□ 0.26
SMPD4-220ENST00000491319 SEC13P55735 322 aa16.68■□□□□ 0.26
SMPD4-220ENST00000491319 SF3A2Q15428 464 aaKnown RBP16.68■□□□□ 0.26
SMPD4-220ENST00000491319 ZACNQ401N2 412 aa16.68■□□□□ 0.26
SMPD4-220ENST00000491319 CEP135Q66GS9 1140 aa16.68■□□□□ 0.26
SMPD4-220ENST00000491319 ACOT1Q86TX2 421 aa16.68■□□□□ 0.26
SMPD4-220ENST00000491319 FUKQ8N0W3 1084 aa16.68■□□□□ 0.26
SMPD4-220ENST00000491319 TMEM174Q8WUU8 243 aa16.68■□□□□ 0.26
SMPD4-220ENST00000491319 SMARCD1Q96GM5 515 aa16.68■□□□□ 0.26
SMPD4-220ENST00000491319 TNIP3Q96KP6 325 aa16.68■□□□□ 0.26
SMPD4-220ENST00000491319 SPATA32Q96LK8 384 aa16.68■□□□□ 0.26
SMPD4-220ENST00000491319 DMAP1Q9NPF5 467 aaPredicted RBP16.68■□□□□ 0.26
SMPD4-220ENST00000491319 ZDHHC9Q9Y397 364 aa16.68■□□□□ 0.26
SMPD4-220ENST00000491319 K7EQS6 105 aa16.67■□□□□ 0.26
SMPD4-220ENST00000491319 TNFRSF10BO14763 440 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms