RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 ELMO3Q96BJ8 720 aa14.52□□□□□ -0.09
COL6A3-211ENST00000491233 CHAMP1Q96JM3 812 aa14.52□□□□□ -0.09
COL6A3-211ENST00000491233 HHIPQ96QV1 700 aa14.52□□□□□ -0.09
COL6A3-211ENST00000491233 VRTNQ9H8Y1 702 aa14.52□□□□□ -0.09
COL6A3-211ENST00000491233 SEMA4GQ9NTN9 838 aa14.52□□□□□ -0.09
COL6A3-211ENST00000491233 SMPD4Q9NXE4 827 aa14.52□□□□□ -0.09
COL6A3-211ENST00000491233 CPQQ9Y646 472 aa14.52□□□□□ -0.09
COL6A3-211ENST00000491233 ATP8B3O60423 1300 aa14.51□□□□□ -0.09
COL6A3-211ENST00000491233 CCDC163A0A0D9SF12 145 aa14.51□□□□□ -0.09
COL6A3-211ENST00000491233 SCAMP3O14828 347 aaKnown RBP14.51□□□□□ -0.09
COL6A3-211ENST00000491233 RPP40O75818 363 aaKnown RBP14.51□□□□□ -0.09
COL6A3-211ENST00000491233 OLFM2O95897 454 aa14.51□□□□□ -0.09
COL6A3-211ENST00000491233 OAS1P00973 400 aaKnown RBP14.51□□□□□ -0.09
COL6A3-211ENST00000491233 NR3C1P04150 777 aa14.51□□□□□ -0.09
COL6A3-211ENST00000491233 PPP3CCP48454 512 aa14.51□□□□□ -0.09
COL6A3-211ENST00000491233 AP3M2P53677 418 aa14.51□□□□□ -0.09
COL6A3-211ENST00000491233 CDH8P55286 799 aa14.51□□□□□ -0.09
COL6A3-211ENST00000491233 SLC7A9P82251 487 aa14.51□□□□□ -0.09
COL6A3-211ENST00000491233 NR1H3Q13133 447 aa14.51□□□□□ -0.09
COL6A3-211ENST00000491233 PSMD2Q13200 908 aa14.51□□□□□ -0.09
COL6A3-211ENST00000491233 PRR23CQ6ZRP0 262 aa14.51□□□□□ -0.09
COL6A3-211ENST00000491233 FAM35AQ86V20 835 aa14.51□□□□□ -0.09
COL6A3-211ENST00000491233 SLC9A9Q8IVB4 645 aa14.51□□□□□ -0.09
COL6A3-211ENST00000491233 SPATA32Q96LK8 384 aa14.51□□□□□ -0.09
COL6A3-211ENST00000491233 SLITRK1Q96PX8 696 aa14.51□□□□□ -0.09
COL6A3-211ENST00000491233 RNF38Q9H0F5 515 aa14.51□□□□□ -0.09
COL6A3-211ENST00000491233 SDCBP2Q9H190 292 aa14.51□□□□□ -0.09
COL6A3-211ENST00000491233 LINC00597Q9H2U6 94 aa14.51□□□□□ -0.09
COL6A3-211ENST00000491233 KCTD10Q9H3F6 313 aa14.51□□□□□ -0.09
COL6A3-211ENST00000491233 DMAC2Q9NW81 257 aa14.51□□□□□ -0.09
COL6A3-211ENST00000491233 MYOFQ9NZM1 2061 aa14.5□□□□□ -0.09
COL6A3-211ENST00000491233 VNN1O95497 513 aa14.5□□□□□ -0.09
COL6A3-211ENST00000491233 C4BPAP04003 597 aaKnown RBP14.5□□□□□ -0.09
COL6A3-211ENST00000491233 CCDC192P0DO97 292 aa14.5□□□□□ -0.09
COL6A3-211ENST00000491233 MBL2P11226 248 aaPredicted RBP14.5□□□□□ -0.09
COL6A3-211ENST00000491233 CMA1P23946 247 aa14.5□□□□□ -0.09
COL6A3-211ENST00000491233 DLG4P78352 724 aa14.5□□□□□ -0.09
COL6A3-211ENST00000491233 CLDN10P78369 228 aa14.5□□□□□ -0.09
COL6A3-211ENST00000491233 CSRP2Q16527 193 aa14.5□□□□□ -0.09
COL6A3-211ENST00000491233 FILIP1Q7Z7B0 1213 aa14.5□□□□□ -0.09
COL6A3-211ENST00000491233 NUP93Q8N1F7 819 aa14.5□□□□□ -0.09
COL6A3-211ENST00000491233 ACDQ96AP0 544 aa14.5□□□□□ -0.09
COL6A3-211ENST00000491233 RTKNQ9BST9 563 aa14.5□□□□□ -0.09
COL6A3-211ENST00000491233 MED10Q9BTT4 135 aa14.5□□□□□ -0.09
COL6A3-211ENST00000491233 USP25Q9UHP3 1055 aa14.5□□□□□ -0.09
COL6A3-211ENST00000491233 HPSEQ9Y251 543 aa14.5□□□□□ -0.09
COL6A3-211ENST00000491233 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.49□□□□□ -0.09
COL6A3-211ENST00000491233 PDXKO00764 312 aa14.49□□□□□ -0.09
COL6A3-211ENST00000491233 RTN3O95197 1032 aaPredicted RBP14.49□□□□□ -0.09
COL6A3-211ENST00000491233 CYP17A1P05093 508 aa14.49□□□□□ -0.09
COL6A3-211ENST00000491233 PRR29P0C7W0 189 aa14.49□□□□□ -0.09
COL6A3-211ENST00000491233 YWHAQP27348 245 aa14.49□□□□□ -0.09
COL6A3-211ENST00000491233 OPRD1P41143 372 aa14.49□□□□□ -0.09
COL6A3-211ENST00000491233 KRT85P78386 507 aa14.49□□□□□ -0.09
COL6A3-211ENST00000491233 DMC1Q14565 340 aa14.49□□□□□ -0.09
COL6A3-211ENST00000491233 GAB4Q2WGN9 574 aa14.49□□□□□ -0.09
COL6A3-211ENST00000491233 ZACNQ401N2 412 aa14.49□□□□□ -0.09
COL6A3-211ENST00000491233 CEP135Q66GS9 1140 aa14.49□□□□□ -0.09
COL6A3-211ENST00000491233 SYT13Q7L8C5 426 aa14.49□□□□□ -0.09
COL6A3-211ENST00000491233 KBTBD6Q86V97 674 aa14.49□□□□□ -0.09
COL6A3-211ENST00000491233 CAMKK1Q8N5S9 505 aa14.49□□□□□ -0.09
COL6A3-211ENST00000491233 PDZD8Q8NEN9 1154 aa14.49□□□□□ -0.09
COL6A3-211ENST00000491233 NETO1Q8TDF5 533 aa14.49□□□□□ -0.09
COL6A3-211ENST00000491233 FBXO32Q969P5 355 aa14.49□□□□□ -0.09
COL6A3-211ENST00000491233 SMARCD1Q96GM5 515 aa14.49□□□□□ -0.09
COL6A3-211ENST00000491233 TNIP3Q96KP6 325 aa14.49□□□□□ -0.09
COL6A3-211ENST00000491233 KCNK16Q96T55 309 aa14.49□□□□□ -0.09
COL6A3-211ENST00000491233 DMAP1Q9NPF5 467 aaPredicted RBP14.49□□□□□ -0.09
COL6A3-211ENST00000491233 KRT82Q9NSB4 513 aa14.49□□□□□ -0.09
COL6A3-211ENST00000491233 CFAP97Q9P2B7 532 aa14.49□□□□□ -0.09
COL6A3-211ENST00000491233 DCDC2BA2VCK2 349 aa14.48□□□□□ -0.09
COL6A3-211ENST00000491233 AXIN1O15169 862 aa14.48□□□□□ -0.09
COL6A3-211ENST00000491233 AKAP3O75969 853 aa14.48□□□□□ -0.09
COL6A3-211ENST00000491233 EPN2O95208 641 aa14.48□□□□□ -0.09
COL6A3-211ENST00000491233 RPN1P04843 607 aaKnown RBP14.48□□□□□ -0.09
COL6A3-211ENST00000491233 MYL1P05976 194 aa14.48□□□□□ -0.09
COL6A3-211ENST00000491233 P4HA1P13674 534 aa14.48□□□□□ -0.09
COL6A3-211ENST00000491233 CCDC130P13994 396 aa14.48□□□□□ -0.09
COL6A3-211ENST00000491233 PIK3CAP42336 1068 aa14.48□□□□□ -0.09
COL6A3-211ENST00000491233 SYKP43405 635 aa14.48□□□□□ -0.09
COL6A3-211ENST00000491233 SLC5A3P53794 718 aa14.48□□□□□ -0.09
COL6A3-211ENST00000491233 SEC13P55735 322 aa14.48□□□□□ -0.09
COL6A3-211ENST00000491233 ORC1Q13415 861 aa14.48□□□□□ -0.09
COL6A3-211ENST00000491233 PAQR9Q6ZVX9 377 aa14.48□□□□□ -0.09
COL6A3-211ENST00000491233 CACNA2D4Q7Z3S7 1137 aa14.48□□□□□ -0.09
COL6A3-211ENST00000491233 ACOT1Q86TX2 421 aa14.48□□□□□ -0.09
COL6A3-211ENST00000491233 FUKQ8N0W3 1084 aa14.48□□□□□ -0.09
COL6A3-211ENST00000491233 TMC2Q8TDI7 906 aa14.48□□□□□ -0.09
COL6A3-211ENST00000491233 TMEM174Q8WUU8 243 aa14.48□□□□□ -0.09
COL6A3-211ENST00000491233 HMGXB4Q9UGU5 601 aa14.48□□□□□ -0.09
COL6A3-211ENST00000491233 ZDHHC9Q9Y397 364 aa14.48□□□□□ -0.09
COL6A3-211ENST00000491233 SLC9A3R1O14745 358 aaPredicted RBP14.47□□□□□ -0.09
COL6A3-211ENST00000491233 SLC30A4O14863 429 aa14.47□□□□□ -0.09
COL6A3-211ENST00000491233 CALUO43852 315 aaPredicted RBP14.47□□□□□ -0.09
COL6A3-211ENST00000491233 AP1G2O75843 785 aa14.47□□□□□ -0.09
COL6A3-211ENST00000491233 APBB3O95704 486 aa14.47□□□□□ -0.09
COL6A3-211ENST00000491233 ASS1P00966 412 aaKnown RBP14.47□□□□□ -0.09
COL6A3-211ENST00000491233 NDUFA8P51970 172 aa14.47□□□□□ -0.09
COL6A3-211ENST00000491233 DHCR24Q15392 516 aa14.47□□□□□ -0.09
COL6A3-211ENST00000491233 CCDC6Q16204 474 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms