RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 HERC6Q8IVU3 1022 aa23.95■■□□□ 1.42
USF3-203ENST00000491165 BCL7CQ8WUZ0 217 aaPredicted RBP23.95■■□□□ 1.42
USF3-203ENST00000491165 GDF15Q99988 308 aa23.95■■□□□ 1.42
USF3-203ENST00000491165 EPB41L4BQ9H329 900 aa23.95■■□□□ 1.42
USF3-203ENST00000491165 LRRC4CQ9HCJ2 640 aa23.95■■□□□ 1.42
USF3-203ENST00000491165 GRXCR1A8MXD5 290 aa23.95■■□□□ 1.42
USF3-203ENST00000491165 HCRTO43612 131 aa23.95■■□□□ 1.42
USF3-203ENST00000491165 LINC00271P0C7V0 271 aa23.95■■□□□ 1.42
USF3-203ENST00000491165 USP8P40818 1118 aa23.95■■□□□ 1.42
USF3-203ENST00000491165 PNPLA4P41247 253 aa23.95■■□□□ 1.42
USF3-203ENST00000491165 PTGIRP43119 386 aa23.95■■□□□ 1.42
USF3-203ENST00000491165 BTG3Q14201 252 aaPredicted RBP23.95■■□□□ 1.42
USF3-203ENST00000491165 SEL1L2Q5TEA6 688 aa23.95■■□□□ 1.42
USF3-203ENST00000491165 DENND2CQ68D51 928 aa23.95■■□□□ 1.42
USF3-203ENST00000491165 ZDHHC24Q6UX98 284 aa23.95■■□□□ 1.42
USF3-203ENST00000491165 DDX27Q96GQ7 796 aaKnown RBP23.95■■□□□ 1.42
USF3-203ENST00000491165 UROC1Q96N76 676 aa23.95■■□□□ 1.42
USF3-203ENST00000491165 MRPL45Q9BRJ2 306 aaKnown RBP23.95■■□□□ 1.42
USF3-203ENST00000491165 GDAP2Q9NXN4 497 aa23.95■■□□□ 1.42
USF3-203ENST00000491165 PCYOX1Q9UHG3 505 aa23.95■■□□□ 1.42
USF3-203ENST00000491165 CTNNA2P26232 953 aa23.94■■□□□ 1.42
USF3-203ENST00000491165 MARCKSL1P49006 195 aa23.94■■□□□ 1.42
USF3-203ENST00000491165 MFAP3P55082 362 aa23.94■■□□□ 1.42
USF3-203ENST00000491165 BCAR1P56945 870 aa23.94■■□□□ 1.42
USF3-203ENST00000491165 SV2CQ496J9 727 aa23.94■■□□□ 1.42
USF3-203ENST00000491165 PRELID2Q8N945 189 aa23.94■■□□□ 1.42
USF3-203ENST00000491165 FBXO25Q8TCJ0 367 aa23.94■■□□□ 1.42
USF3-203ENST00000491165 CISHQ9NSE2 258 aa23.94■■□□□ 1.42
USF3-203ENST00000491165 TIMM13Q9Y5L4 95 aaPredicted RBP23.94■■□□□ 1.42
USF3-203ENST00000491165 C5orf60A6NFR6 353 aa23.93■■□□□ 1.42
USF3-203ENST00000491165 CAPN15O75808 1086 aa23.93■■□□□ 1.42
USF3-203ENST00000491165 MTA2O94776 668 aa23.93■■□□□ 1.42
USF3-203ENST00000491165 COMTP21964 271 aa23.93■■□□□ 1.42
USF3-203ENST00000491165 RABGGTBP53611 331 aa23.93■■□□□ 1.42
USF3-203ENST00000491165 BYSLQ13895 437 aaKnown RBP23.93■■□□□ 1.42
USF3-203ENST00000491165 DCLRE1AQ6PJP8 1040 aa23.93■■□□□ 1.42
USF3-203ENST00000491165 KBTBD7Q8WVZ9 684 aa23.93■■□□□ 1.42
USF3-203ENST00000491165 SENP8Q96LD8 212 aa23.93■■□□□ 1.42
USF3-203ENST00000491165 SLC9A7Q96T83 725 aa23.93■■□□□ 1.42
USF3-203ENST00000491165 SHBGP04278 402 aa23.93■■□□□ 1.42
USF3-203ENST00000491165 GZMAP12544 262 aa23.93■■□□□ 1.42
USF3-203ENST00000491165 TBXAS1P24557 533 aaPredicted RBP23.93■■□□□ 1.42
USF3-203ENST00000491165 ACTN3Q08043 901 aaPredicted RBP23.93■■□□□ 1.42
USF3-203ENST00000491165 ORC1Q13415 861 aa23.93■■□□□ 1.42
USF3-203ENST00000491165 MESDQ14696 234 aa23.93■■□□□ 1.42
USF3-203ENST00000491165 QPCTQ16769 361 aa23.93■■□□□ 1.42
USF3-203ENST00000491165 ZNF394Q53GI3 561 aa23.93■■□□□ 1.42
USF3-203ENST00000491165 CCDC121Q6ZUS5 278 aa23.93■■□□□ 1.42
USF3-203ENST00000491165 LIMS2Q7Z4I7 341 aa23.93■■□□□ 1.42
USF3-203ENST00000491165 EPS8L1Q8TE68 723 aa23.93■■□□□ 1.42
USF3-203ENST00000491165 TWNKQ96RR1 684 aa23.93■■□□□ 1.42
USF3-203ENST00000491165 GRHL1Q9NZI5 618 aa23.93■■□□□ 1.42
USF3-203ENST00000491165 TRANK1O15050 2925 aa23.92■■□□□ 1.42
USF3-203ENST00000491165 ALDH2P05091 517 aa23.92■■□□□ 1.42
USF3-203ENST00000491165 MYOGP15173 224 aa23.92■■□□□ 1.42
USF3-203ENST00000491165 PEX5P50542 639 aa23.92■■□□□ 1.42
USF3-203ENST00000491165 CMTR2Q8IYT2 770 aaKnown RBP23.92■■□□□ 1.42
USF3-203ENST00000491165 PCDHB18PQ96TA0 734 aa23.92■■□□□ 1.42
USF3-203ENST00000491165 ZBED2Q9BTP6 218 aa23.92■■□□□ 1.42
USF3-203ENST00000491165 MTRF1LQ9UGC7 380 aaKnown RBP23.92■■□□□ 1.42
USF3-203ENST00000491165 NOCTQ9UK39 431 aaKnown RBP23.92■■□□□ 1.42
USF3-203ENST00000491165 REV3LO60673 3130 aa23.92■■□□□ 1.42
USF3-203ENST00000491165 CYB561D2O14569 222 aa23.92■■□□□ 1.42
USF3-203ENST00000491165 GTF2A1P52655 376 aaPredicted RBP23.92■■□□□ 1.42
USF3-203ENST00000491165 TMEM270Q6UE05 265 aa23.92■■□□□ 1.42
USF3-203ENST00000491165 SPRED2Q7Z698 418 aa23.92■■□□□ 1.42
USF3-203ENST00000491165 NOP9Q86U38 636 aaKnown RBP23.92■■□□□ 1.42
USF3-203ENST00000491165 FAM71AQ8IYT1 594 aa23.92■■□□□ 1.42
USF3-203ENST00000491165 CENPTQ96BT3 561 aa23.92■■□□□ 1.42
USF3-203ENST00000491165 PGM2Q96G03 612 aa23.92■■□□□ 1.42
USF3-203ENST00000491165 TMEM189-UBE2V1I3L0A0 370 aa23.91■■□□□ 1.42
USF3-203ENST00000491165 CYP26A1O43174 497 aa23.91■■□□□ 1.42
USF3-203ENST00000491165 ARHGEF15O94989 841 aa23.91■■□□□ 1.42
USF3-203ENST00000491165 CHRNB2P17787 502 aa23.91■■□□□ 1.42
USF3-203ENST00000491165 RGS19P49795 217 aa23.91■■□□□ 1.42
USF3-203ENST00000491165 WSCD1Q658N2 575 aa23.91■■□□□ 1.42
USF3-203ENST00000491165 CCDC137Q6PK04 289 aaKnown RBP23.91■■□□□ 1.42
USF3-203ENST00000491165 ENOSF1Q7L5Y1 443 aa23.91■■□□□ 1.42
USF3-203ENST00000491165 CACNA2D3Q8IZS8 1091 aa23.91■■□□□ 1.42
USF3-203ENST00000491165 PHOSPHO2Q8TCD6 241 aa23.91■■□□□ 1.42
USF3-203ENST00000491165 RSPH1Q8WYR4 309 aa23.91■■□□□ 1.42
USF3-203ENST00000491165 SEC16BQ96JE7 1060 aa23.91■■□□□ 1.42
USF3-203ENST00000491165 CABS1Q96KC9 395 aa23.91■■□□□ 1.42
USF3-203ENST00000491165 GPR62Q9BZJ7 368 aa23.91■■□□□ 1.42
USF3-203ENST00000491165 ADAM28Q9UKQ2 775 aa23.91■■□□□ 1.42
USF3-203ENST00000491165 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.91■■□□□ 1.42
USF3-203ENST00000491165 NLRC5Q86WI3 1866 aa23.91■■□□□ 1.42
USF3-203ENST00000491165 RPL21P46778 160 aaKnown RBP23.9■■□□□ 1.42
USF3-203ENST00000491165 TTC27Q6P3X3 843 aa23.9■■□□□ 1.42
USF3-203ENST00000491165 RNF25Q96BH1 459 aaPredicted RBP23.9■■□□□ 1.42
USF3-203ENST00000491165 B3GALT6Q96L58 329 aa23.9■■□□□ 1.42
USF3-203ENST00000491165 RUNDC3BQ96NL0 473 aa23.9■■□□□ 1.42
USF3-203ENST00000491165 TMEM175Q9BSA9 504 aa23.9■■□□□ 1.42
USF3-203ENST00000491165 UBE2OQ9C0C9 1292 aaKnown RBP23.9■■□□□ 1.42
USF3-203ENST00000491165 ACTR5Q9H9F9 607 aaPredicted RBP23.9■■□□□ 1.42
USF3-203ENST00000491165 INSL6Q9Y581 213 aa23.9■■□□□ 1.42
USF3-203ENST00000491165 EYSQ5T1H1 3165 aa23.9■■□□□ 1.42
USF3-203ENST00000491165 TLL1O43897 1013 aa23.9■■□□□ 1.42
USF3-203ENST00000491165 KRT5P13647 590 aa23.9■■□□□ 1.42
USF3-203ENST00000491165 LMO2P25791 158 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms