RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-223ENST00000490833 UBQLN1Q9UMX0 589 aaKnown RBP6.64□□□□□ -1.35
FN1-223ENST00000490833 RPL26L1Q9UNX3 145 aaKnown RBP6.64□□□□□ -1.35
FN1-223ENST00000490833 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.64□□□□□ -1.35
FN1-223ENST00000490833 USTQ9Y2C2 406 aa6.64□□□□□ -1.35
FN1-223ENST00000490833 STARD13Q9Y3M8 1113 aa6.64□□□□□ -1.35
FN1-223ENST00000490833 NR2E1Q9Y466 385 aa6.64□□□□□ -1.35
FN1-223ENST00000490833 USP15Q9Y4E8 981 aaPredicted RBP6.64□□□□□ -1.35
FN1-223ENST00000490833 PARP14Q460N5 1801 aa6.64□□□□□ -1.35
FN1-223ENST00000490833 BRCA1P38398 1863 aaKnown RBP6.64□□□□□ -1.35
FN1-223ENST00000490833 RLFQ13129 1914 aa6.64□□□□□ -1.35
FN1-223ENST00000490833 A6NJR5 290 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 LACTBL1A8MY62 500 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 ZBTB42B2RXF5 422 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 RASA4BC9J798 803 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 TERTO14746 1132 aaKnown RBP6.63□□□□□ -1.35
FN1-223ENST00000490833 MTSS1O43312 755 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 RASA4O43374 803 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 CLUHO75153 1309 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 CNMDO75829 334 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 DNAJC8O75937 253 aaPredicted RBP6.63□□□□□ -1.35
FN1-223ENST00000490833 KRT37O76014 449 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 LGALS2P05162 132 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 HARSP12081 509 aaKnown RBP6.63□□□□□ -1.35
FN1-223ENST00000490833 BRAFP15056 766 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 PDGFRAP16234 1089 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 SDC4P31431 198 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 EPHX2P34913 555 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 FLT3P36888 993 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 MSH2P43246 934 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 GPD2P43304 727 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 PTPN9P43378 593 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 KCNJ1P48048 391 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 CPT1AP50416 773 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 RAD23BP54727 409 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 SOX10P56693 466 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 GPS1Q13098 491 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 IFT88Q13099 833 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 NAB1Q13506 487 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 SNX1Q13596 522 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 TRADDQ15628 312 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 OASLQ15646 514 aaKnown RBP6.63□□□□□ -1.35
FN1-223ENST00000490833 KYNUQ16719 465 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 FAM110CQ1W6H9 321 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 CCDC14Q49A88 953 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 CCDC38Q502W7 563 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 ACBD5Q5T8D3 534 aaPredicted RBP6.63□□□□□ -1.35
FN1-223ENST00000490833 ARHGAP17Q68EM7 881 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 TMEM110Q86TL2 294 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 RSPH3Q86UC2 560 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 EXOC3L1Q86VI1 746 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 CDKL3Q8IVW4 592 aaPredicted RBP6.63□□□□□ -1.35
FN1-223ENST00000490833 C2orf69Q8N8R5 385 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 MCUQ8NE86 351 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 ZSWIM2Q8NEG5 633 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 SNIP1Q8TAD8 396 aaKnown RBP6.63□□□□□ -1.35
FN1-223ENST00000490833 RAB3IL1Q8TBN0 382 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 FBF1Q8TES7 1133 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 CKAP2Q8WWK9 683 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 ATP2A3Q93084 1043 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 ZNF317Q96PQ6 595 aaPredicted RBP6.63□□□□□ -1.35
FN1-223ENST00000490833 SIKE1Q9BRV8 207 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 ZNF670Q9BS34 389 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 HEMGNQ9BXL5 484 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 PITPNM3Q9BZ71 974 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 TRIM6Q9C030 488 aaPredicted RBP6.63□□□□□ -1.35
FN1-223ENST00000490833 PDGFDQ9GZP0 370 aaPredicted RBP6.63□□□□□ -1.35
FN1-223ENST00000490833 VPS11Q9H270 941 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 XAB2Q9HCS7 855 aaKnown RBP6.63□□□□□ -1.35
FN1-223ENST00000490833 CHST7Q9NS84 486 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 RNF181Q9P0P0 153 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 USP18Q9UMW8 372 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 NAALADL1Q9UQQ1 740 aa6.63□□□□□ -1.35
FN1-223ENST00000490833 KIAA1217Q5T5P2 1943 aa6.62□□□□□ -1.35
FN1-223ENST00000490833 LOC285556D6RIA3 1793 aa6.62□□□□□ -1.35
FN1-223ENST00000490833 TMEM120BA0PK00 339 aa6.62□□□□□ -1.35
FN1-223ENST00000490833 BCLAF3A2AJT9 711 aaKnown RBP6.62□□□□□ -1.35
FN1-223ENST00000490833 GLTPD2A6NH11 291 aa6.62□□□□□ -1.35
FN1-223ENST00000490833 KBTBD13C9JR72 458 aa6.62□□□□□ -1.35
FN1-223ENST00000490833 E7ESA3 106 aa6.62□□□□□ -1.35
FN1-223ENST00000490833 M0QZ92 97 aa6.62□□□□□ -1.35
FN1-223ENST00000490833 CHUKO15111 745 aa6.62□□□□□ -1.35
FN1-223ENST00000490833 CST8O60676 142 aa6.62□□□□□ -1.35
FN1-223ENST00000490833 KRT38O76015 456 aa6.62□□□□□ -1.35
FN1-223ENST00000490833 ENDOD1O94919 500 aa6.62□□□□□ -1.35
FN1-223ENST00000490833 FBXO21O94952 628 aa6.62□□□□□ -1.35
FN1-223ENST00000490833 ACSL3O95573 720 aa6.62□□□□□ -1.35
FN1-223ENST00000490833 TRUB2O95900 331 aaKnown RBP6.62□□□□□ -1.35
FN1-223ENST00000490833 F9P00740 461 aa6.62□□□□□ -1.35
FN1-223ENST00000490833 TROVE2P10155 538 aaKnown RBP eCLIP6.62□□□□□ -1.35
FN1-223ENST00000490833 SKIP12755 728 aa6.62□□□□□ -1.35
FN1-223ENST00000490833 MLNP12872 115 aa6.62□□□□□ -1.35
FN1-223ENST00000490833 CD58P19256 250 aa6.62□□□□□ -1.35
FN1-223ENST00000490833 DRD4P21917 467 aa6.62□□□□□ -1.35
FN1-223ENST00000490833 HTR7P34969 479 aa6.62□□□□□ -1.35
FN1-223ENST00000490833 RFC1P35251 1148 aaPredicted RBP6.62□□□□□ -1.35
FN1-223ENST00000490833 MARCKSL1P49006 195 aa6.62□□□□□ -1.35
FN1-223ENST00000490833 SERPINB9P50453 376 aa6.62□□□□□ -1.35
FN1-223ENST00000490833 BCAT1P54687 386 aa6.62□□□□□ -1.35
FN1-223ENST00000490833 SLC6A3Q01959 620 aa6.62□□□□□ -1.35
FN1-223ENST00000490833 ROR1Q01973 937 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms