RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 NCOA4Q13772 614 aa20.97■□□□□ 0.95
SREBF1-216ENST00000490796 AASDHQ4L235 1098 aaPredicted RBP20.97■□□□□ 0.95
SREBF1-216ENST00000490796 SCARA5Q6ZMJ2 495 aa20.97■□□□□ 0.95
SREBF1-216ENST00000490796 SYT13Q7L8C5 426 aa20.97■□□□□ 0.95
SREBF1-216ENST00000490796 NUP93Q8N1F7 819 aa20.97■□□□□ 0.95
SREBF1-216ENST00000490796 C12orf50Q8NA57 414 aaPredicted RBP20.97■□□□□ 0.95
SREBF1-216ENST00000490796 PDZD8Q8NEN9 1154 aa20.97■□□□□ 0.95
SREBF1-216ENST00000490796 CCDC47Q96A33 483 aaKnown RBP20.97■□□□□ 0.95
SREBF1-216ENST00000490796 PAGE5Q96GU1 130 aa20.97■□□□□ 0.95
SREBF1-216ENST00000490796 LOXL4Q96JB6 756 aa20.97■□□□□ 0.95
SREBF1-216ENST00000490796 B3GNT5Q9BYG0 378 aa20.97■□□□□ 0.95
SREBF1-216ENST00000490796 XYLT2Q9H1B5 865 aa20.97■□□□□ 0.95
SREBF1-216ENST00000490796 ARRDC1-AS1Q9H2J1 176 aa20.97■□□□□ 0.95
SREBF1-216ENST00000490796 CPQQ9Y646 472 aa20.97■□□□□ 0.95
SREBF1-216ENST00000490796 ANAPC1Q9H1A4 1944 aa20.96■□□□□ 0.95
SREBF1-216ENST00000490796 AKAP3O75969 853 aa20.96■□□□□ 0.95
SREBF1-216ENST00000490796 APBB3O95704 486 aa20.96■□□□□ 0.95
SREBF1-216ENST00000490796 MBL2P11226 248 aaPredicted RBP20.96■□□□□ 0.95
SREBF1-216ENST00000490796 TRIM21P19474 475 aaKnown RBP20.96■□□□□ 0.95
SREBF1-216ENST00000490796 STK4Q13043 487 aa20.96■□□□□ 0.95
SREBF1-216ENST00000490796 DMC1Q14565 340 aa20.96■□□□□ 0.95
SREBF1-216ENST00000490796 DDX42Q86XP3 938 aaKnown RBP eCLIP20.96■□□□□ 0.95
SREBF1-216ENST00000490796 PARD3BQ8TEW8 1205 aa20.96■□□□□ 0.95
SREBF1-216ENST00000490796 FBXO32Q969P5 355 aa20.96■□□□□ 0.95
SREBF1-216ENST00000490796 SMYD3Q9H7B4 428 aa20.96■□□□□ 0.95
SREBF1-216ENST00000490796 USP25Q9UHP3 1055 aa20.96■□□□□ 0.95
SREBF1-216ENST00000490796 NME7Q9Y5B8 376 aa20.96■□□□□ 0.95
SREBF1-216ENST00000490796 TPRP12270 2363 aaKnown RBP20.96■□□□□ 0.95
SREBF1-216ENST00000490796 SPAG17Q6Q759 2223 aa20.96■□□□□ 0.95
SREBF1-216ENST00000490796 LRRIQ3A6PVS8 624 aaPredicted RBP20.95■□□□□ 0.94
SREBF1-216ENST00000490796 SLC30A4O14863 429 aa20.95■□□□□ 0.94
SREBF1-216ENST00000490796 CDH8P55286 799 aa20.95■□□□□ 0.94
SREBF1-216ENST00000490796 PKP1Q13835 747 aa20.95■□□□□ 0.94
SREBF1-216ENST00000490796 KMT5BQ4FZB7 885 aa20.95■□□□□ 0.94
SREBF1-216ENST00000490796 FILIP1Q7Z7B0 1213 aa20.95■□□□□ 0.94
SREBF1-216ENST00000490796 KBTBD6Q86V97 674 aa20.95■□□□□ 0.94
SREBF1-216ENST00000490796 KIAA1958Q8N8K9 716 aa20.95■□□□□ 0.94
SREBF1-216ENST00000490796 RNF38Q9H0F5 515 aa20.95■□□□□ 0.94
SREBF1-216ENST00000490796 GZF1Q9H116 711 aaPredicted RBP20.95■□□□□ 0.94
SREBF1-216ENST00000490796 VRTNQ9H8Y1 702 aa20.95■□□□□ 0.94
SREBF1-216ENST00000490796 POLR3BQ9NW08 1133 aaPredicted RBP20.95■□□□□ 0.94
SREBF1-216ENST00000490796 CFAP97Q9P2B7 532 aa20.95■□□□□ 0.94
SREBF1-216ENST00000490796 FRMD4BQ9Y2L6 1034 aa20.95■□□□□ 0.94
SREBF1-216ENST00000490796 GREB1Q4ZG55 1949 aa20.94■□□□□ 0.94
SREBF1-216ENST00000490796 A0A1B0GVL5 298 aa20.94■□□□□ 0.94
SREBF1-216ENST00000490796 ACTN4O43707 911 aaKnown RBP20.94■□□□□ 0.94
SREBF1-216ENST00000490796 KIF20AO95235 890 aa20.94■□□□□ 0.94
SREBF1-216ENST00000490796 RAP1GAPP47736 663 aa20.94■□□□□ 0.94
SREBF1-216ENST00000490796 DGKEP52429 567 aa20.94■□□□□ 0.94
SREBF1-216ENST00000490796 CACNA2D1P54289 1103 aa20.94■□□□□ 0.94
SREBF1-216ENST00000490796 SEC13P55735 322 aa20.94■□□□□ 0.94
SREBF1-216ENST00000490796 ELF2Q15723 593 aa20.94■□□□□ 0.94
SREBF1-216ENST00000490796 SGSM1Q2NKQ1 1148 aa20.94■□□□□ 0.94
SREBF1-216ENST00000490796 CEP135Q66GS9 1140 aa20.94■□□□□ 0.94
SREBF1-216ENST00000490796 IL31Q6EBC2 164 aa20.94■□□□□ 0.94
SREBF1-216ENST00000490796 FAM35AQ86V20 835 aa20.94■□□□□ 0.94
SREBF1-216ENST00000490796 SLC9A9Q8IVB4 645 aa20.94■□□□□ 0.94
SREBF1-216ENST00000490796 KIAA0895Q8NCT3 520 aa20.94■□□□□ 0.94
SREBF1-216ENST00000490796 TSTD1Q8NFU3 115 aa20.94■□□□□ 0.94
SREBF1-216ENST00000490796 OVCA2Q8WZ82 227 aa20.94■□□□□ 0.94
SREBF1-216ENST00000490796 SPATA32Q96LK8 384 aa20.94■□□□□ 0.94
SREBF1-216ENST00000490796 NACA2Q9H009 215 aa20.94■□□□□ 0.94
SREBF1-216ENST00000490796 DMAP1Q9NPF5 467 aaPredicted RBP20.94■□□□□ 0.94
SREBF1-216ENST00000490796 PDXKO00764 312 aa20.93■□□□□ 0.94
SREBF1-216ENST00000490796 CALUO43852 315 aaPredicted RBP20.93■□□□□ 0.94
SREBF1-216ENST00000490796 KLRC4O43908 158 aa20.93■□□□□ 0.94
SREBF1-216ENST00000490796 EPN2O95208 641 aa20.93■□□□□ 0.94
SREBF1-216ENST00000490796 ADH1CP00326 375 aa20.93■□□□□ 0.94
SREBF1-216ENST00000490796 OAS1P00973 400 aaKnown RBP20.93■□□□□ 0.94
SREBF1-216ENST00000490796 C4BPAP04003 597 aaKnown RBP20.93■□□□□ 0.94
SREBF1-216ENST00000490796 NR3C1P04150 777 aa20.93■□□□□ 0.94
SREBF1-216ENST00000490796 RPN1P04843 607 aaKnown RBP20.93■□□□□ 0.94
SREBF1-216ENST00000490796 MYL1P05976 194 aa20.93■□□□□ 0.94
SREBF1-216ENST00000490796 PFKFB1P16118 471 aa20.93■□□□□ 0.94
SREBF1-216ENST00000490796 KCNA4P22459 653 aa20.93■□□□□ 0.94
SREBF1-216ENST00000490796 C2orf27AQ580R0 203 aa20.93■□□□□ 0.94
SREBF1-216ENST00000490796 HECTD3Q5T447 861 aa20.93■□□□□ 0.94
SREBF1-216ENST00000490796 PLEKHO2Q8TD55 490 aa20.93■□□□□ 0.94
SREBF1-216ENST00000490796 SMARCD1Q96GM5 515 aa20.93■□□□□ 0.94
SREBF1-216ENST00000490796 DMAC2Q9NW81 257 aa20.93■□□□□ 0.94
SREBF1-216ENST00000490796 TBC1D14Q9P2M4 693 aa20.93■□□□□ 0.94
SREBF1-216ENST00000490796 PTPRDP23468 1912 aa20.93■□□□□ 0.94
SREBF1-216ENST00000490796 CNOT1A5YKK6 2376 aaKnown RBP20.92■□□□□ 0.94
SREBF1-216ENST00000490796 SCAMP3O14828 347 aaKnown RBP20.92■□□□□ 0.94
SREBF1-216ENST00000490796 GDF9O60383 454 aa20.92■□□□□ 0.94
SREBF1-216ENST00000490796 AP1G2O75843 785 aa20.92■□□□□ 0.94
SREBF1-216ENST00000490796 RHOBTB1O94844 696 aa20.92■□□□□ 0.94
SREBF1-216ENST00000490796 CYP17A1P05093 508 aa20.92■□□□□ 0.94
SREBF1-216ENST00000490796 CMA1P23946 247 aa20.92■□□□□ 0.94
SREBF1-216ENST00000490796 GBP1P32455 592 aa20.92■□□□□ 0.94
SREBF1-216ENST00000490796 CLDN10P78369 228 aa20.92■□□□□ 0.94
SREBF1-216ENST00000490796 KRT85P78386 507 aa20.92■□□□□ 0.94
SREBF1-216ENST00000490796 ZXDBP98169 803 aa20.92■□□□□ 0.94
SREBF1-216ENST00000490796 DHCR24Q15392 516 aa20.92■□□□□ 0.94
SREBF1-216ENST00000490796 CCDC6Q16204 474 aa20.92■□□□□ 0.94
SREBF1-216ENST00000490796 ACOT1Q86TX2 421 aa20.92■□□□□ 0.94
SREBF1-216ENST00000490796 ADGRG2Q8IZP9 1017 aa20.92■□□□□ 0.94
SREBF1-216ENST00000490796 KCNK16Q96T55 309 aa20.92■□□□□ 0.94
SREBF1-216ENST00000490796 IMPG2Q9BZV3 1241 aa20.92■□□□□ 0.94
SREBF1-216ENST00000490796 TMEM30AQ9NV96 361 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms