RNA–Protein interactions for RNA: ENST00000490668.5

SFPQ-210, Transcript of splicing factor proline and glutamine rich, human

TSL 2

Gene SFPQ, Length 434 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFPQ-210	ENST00000490668	EFCAB12	Q6NXP0	572 aa		4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	RPAIN	Q86UA6	219 aa		4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	ZNF410	Q86VK4	478 aa		4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	TMTC1	Q8IUR5	882 aa		4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	CCDC103	Q8IW40	242 aa		4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	MICALL1	Q8N3F8	863 aa		4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	LRRC71	Q8N4P6	559 aa		4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	FIBCD1	Q8N539	461 aa		4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	CISD2	Q8N5K1	135 aa	Known RBP	4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	LSMEM1	Q8N8F7	131 aa		4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	USP38	Q8NB14	1042 aa		4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	MCPH1	Q8NEM0	835 aa		4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	ADAMTS18	Q8TE60	1221 aa		4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	PIGO	Q8TEQ8	1089 aa		4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	DNAJB3	Q8WWF6	145 aa		4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	PSPC1	Q8WXF1	523 aa	Known RBP	4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	LRTOMT	Q8WZ04	291 aa		4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	LARP4B	Q92615	738 aa	Known RBP	4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	HDAC2	Q92769	488 aa	Known RBP	4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	BAD	Q92934	168 aa		4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	WNT8B	Q93098	351 aa		4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	TRIM43	Q96BQ3	446 aa	Predicted RBP	4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	RSRC1	Q96IZ7	334 aa	Known RBP	4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	NLRP4	Q96MN2	994 aa		4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	SLC2A13	Q96QE2	648 aa		4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	CTAGE1	Q96RT6	745 aa		4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	BARD1	Q99728	777 aa	Known RBP	4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	HSD17B14	Q9BPX1	270 aa		4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	SH2D3A	Q9BRG2	576 aa		4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	PYM1	Q9BRP8	204 aa	Known RBP	4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	TMEM120A	Q9BXJ8	343 aa		4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	UBE2O	Q9C0C9	1292 aa	Known RBP	4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	SCAND2P	Q9GZW5	306 aa	Predicted RBP	4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	ZMAT4	Q9H898	229 aa		4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	SUGCT	Q9HAC7	445 aa		4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	GPR27	Q9NS67	375 aa		4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	DNAJC28	Q9NX36	388 aa		4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	TOR4A	Q9NXH8	423 aa		4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	STK17A	Q9UEE5	414 aa		4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	GDF2	Q9UK05	429 aa	Predicted RBP	4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	DBR1	Q9UK59	544 aa	Known RBP	4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	CBLC	Q9ULV8	474 aa		4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	GINS2	Q9Y248	185 aa		4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	NOC2L	Q9Y3T9	749 aa	Known RBP	4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	TTLL3	Q9Y4R7	772 aa		4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	PCDHGB2	Q9Y5G2	931 aa		4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	SPO11	Q9Y5K1	396 aa		4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	SRPRB	Q9Y5M8	271 aa	Known RBP	4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	CDY2A	Q9Y6F7	541 aa		4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668	LOXHD1	Q8IVV2	1947 aa		4.74	□□□□□ -1.65
SFPQ-210	ENST00000490668		A0A1W2PPC1	479 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	GOLGA6L4	A6NEF3	574 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	CAPN8	A6NHC0	703 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	RHPN2P1	A8MT19	583 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	TOR1B	O14657	336 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	TM4SF5	O14894	197 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	PLOD3	O60568	738 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	CUTA	O60888	179 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	TBCA	O75347	108 aa	Known RBP	4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	MAF	O75444	373 aa	Predicted RBP	4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	SLITRK5	O94991	958 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	STBD1	O95210	358 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	DLGAP3	O95886	979 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	CST3	P01034	146 aa	Predicted RBP	4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	VTN	P04004	478 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	IQCF3	P0C7M6	154 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	GHR	P10912	638 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	OSM	P13725	252 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	LCP1	P13796	627 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	SFPQ	P23246	707 aa	Known RBP eCLIP	4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	CDC25A	P30304	524 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	GALNS	P34059	522 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	HOXD12	P35452	270 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	GPC3	P51654	580 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	NPEPPS	P55786	919 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	CDC42EP1	Q00587	391 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	AMPD2	Q01433	879 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	ROR1	Q01973	937 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	GRIN1	Q05586	938 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	MGAT3	Q09327	533 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	TMEM62	Q0P6H9	643 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	GALNT1	Q10472	559 aa	Predicted RBP	4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	DMP1	Q13316	513 aa	Predicted RBP	4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	MXD4	Q14582	209 aa	Predicted RBP	4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	KARS	Q15046	597 aa	Known RBP	4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	PCSK7	Q16549	785 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	ARHGAP44	Q17R89	818 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	ANO6	Q4KMQ2	910 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	TMEM119	Q4V9L6	283 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	TOR2A	Q5JU69	321 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	FKBP15	Q5T1M5	1219 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	ZNF618	Q5T7W0	954 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	RRAGB	Q5VZM2	374 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	FSTL4	Q6MZW2	842 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	CNKSR3	Q6P9H4	555 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	CCDC73	Q6ZRK6	1079 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	DEFB128	Q7Z7B8	93 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	RHPN2	Q8IUC4	686 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	TDH	Q8IZJ6	230 aa		4.73	□□□□□ -1.65
SFPQ-210	ENST00000490668	LINC01465	Q8N7H1	131 aa		4.73	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms