RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 ZNF467Q7Z7K2 595 aaPredicted RBP14.97□□□□□ -0.01
ARHGEF39-205ENST00000490638 DEFB106AQ8N104 65 aa14.97□□□□□ -0.01
ARHGEF39-205ENST00000490638 LRRC1Q9BTT6 524 aa14.97□□□□□ -0.01
ARHGEF39-205ENST00000490638 G3BP2Q9UN86 482 aaKnown RBP14.97□□□□□ -0.01
ARHGEF39-205ENST00000490638 TGFB1I1O43294 461 aa14.97□□□□□ -0.01
ARHGEF39-205ENST00000490638 PROSCO94903 275 aa14.97□□□□□ -0.01
ARHGEF39-205ENST00000490638 ZNF268Q14587 947 aaPredicted RBP14.97□□□□□ -0.01
ARHGEF39-205ENST00000490638 LRRC55Q6ZSA7 311 aa14.97□□□□□ -0.01
ARHGEF39-205ENST00000490638 CCDC33Q8N5R6 958 aa14.97□□□□□ -0.01
ARHGEF39-205ENST00000490638 FAM71DQ8N9W8 422 aa14.97□□□□□ -0.01
ARHGEF39-205ENST00000490638 KRT35Q92764 455 aa14.97□□□□□ -0.01
ARHGEF39-205ENST00000490638 C9orf72Q96LT7 481 aa14.97□□□□□ -0.01
ARHGEF39-205ENST00000490638 CDK5RAP1Q96SZ6 601 aaKnown RBP14.97□□□□□ -0.01
ARHGEF39-205ENST00000490638 TRIM51Q9BSJ1 452 aa14.97□□□□□ -0.01
ARHGEF39-205ENST00000490638 AIPL1Q9NZN9 384 aa14.97□□□□□ -0.01
ARHGEF39-205ENST00000490638 HACD3Q9P035 362 aa14.97□□□□□ -0.01
ARHGEF39-205ENST00000490638 DOLKQ9UPQ8 538 aa14.97□□□□□ -0.01
ARHGEF39-205ENST00000490638 CXCL14O95715 111 aa14.96□□□□□ -0.01
ARHGEF39-205ENST00000490638 LTFP02788 710 aa14.96□□□□□ -0.01
ARHGEF39-205ENST00000490638 OR1D2P34982 312 aa14.96□□□□□ -0.01
ARHGEF39-205ENST00000490638 CLCN6P51797 869 aa14.96□□□□□ -0.01
ARHGEF39-205ENST00000490638 PPIGQ13427 754 aaKnown RBP eCLIP14.96□□□□□ -0.013e-7■■■■□ 24.4
ARHGEF39-205ENST00000490638 PSMD5Q16401 504 aa14.96□□□□□ -0.01
ARHGEF39-205ENST00000490638 SLC13A5Q86YT5 568 aaPredicted RBP14.96□□□□□ -0.01
ARHGEF39-205ENST00000490638 LRRC43Q8N309 656 aa14.96□□□□□ -0.01
ARHGEF39-205ENST00000490638 CCNYL1Q8N7R7 359 aa14.96□□□□□ -0.01
ARHGEF39-205ENST00000490638 IKZF4Q9H2S9 585 aa14.96□□□□□ -0.01
ARHGEF39-205ENST00000490638 THG1LQ9NWX6 298 aaKnown RBP14.96□□□□□ -0.01
ARHGEF39-205ENST00000490638 RRN3Q9NYV6 651 aa14.96□□□□□ -0.01
ARHGEF39-205ENST00000490638 MRPS23Q9Y3D9 190 aaKnown RBP14.96□□□□□ -0.01
ARHGEF39-205ENST00000490638 A0A087WUV0 522 aaPredicted RBP14.96□□□□□ -0.01
ARHGEF39-205ENST00000490638 CBX4O00257 560 aa14.96□□□□□ -0.01
ARHGEF39-205ENST00000490638 NDUFS3O75489 264 aa14.96□□□□□ -0.01
ARHGEF39-205ENST00000490638 USP17L7P0C7H9 530 aa14.96□□□□□ -0.01
ARHGEF39-205ENST00000490638 OXCT1P55809 520 aa14.96□□□□□ -0.01
ARHGEF39-205ENST00000490638 NFIL3Q16649 462 aa14.96□□□□□ -0.01
ARHGEF39-205ENST00000490638 MCOLN2Q8IZK6 566 aa14.96□□□□□ -0.01
ARHGEF39-205ENST00000490638 RBM15Q96T37 977 aaKnown RBP eCLIP14.96□□□□□ -0.01
ARHGEF39-205ENST00000490638 ZSWIM1Q9BR11 485 aa14.96□□□□□ -0.01
ARHGEF39-205ENST00000490638 TRAIPQ9BWF2 469 aa14.96□□□□□ -0.01
ARHGEF39-205ENST00000490638 SPG21Q9NZD8 308 aa14.96□□□□□ -0.01
ARHGEF39-205ENST00000490638 FAM47DPA6NHR8 397 aa14.96□□□□□ -0.01
ARHGEF39-205ENST00000490638 E5RJQ4 531 aa14.96□□□□□ -0.01
ARHGEF39-205ENST00000490638 F8VP50 259 aa14.96□□□□□ -0.01
ARHGEF39-205ENST00000490638 SLC10A3P09131 477 aa14.96□□□□□ -0.01
ARHGEF39-205ENST00000490638 KCNA4P22459 653 aa14.96□□□□□ -0.01
ARHGEF39-205ENST00000490638 RASSF2P50749 326 aa14.96□□□□□ -0.01
ARHGEF39-205ENST00000490638 PDK2Q15119 407 aa14.96□□□□□ -0.01
ARHGEF39-205ENST00000490638 TFB1MQ8WVM0 346 aaKnown RBP14.96□□□□□ -0.01
ARHGEF39-205ENST00000490638 EPC1Q9H2F5 836 aa14.96□□□□□ -0.01
ARHGEF39-205ENST00000490638 GOLGA2P5Q9HBQ8 144 aa14.96□□□□□ -0.01
ARHGEF39-205ENST00000490638 MORF4L1Q9UBU8 362 aa14.96□□□□□ -0.01
ARHGEF39-205ENST00000490638 ZC3H7BQ9UGR2 993 aaKnown RBP14.96□□□□□ -0.01
ARHGEF39-205ENST00000490638 SMIM28A0A1B0GU29 152 aa14.96□□□□□ -0.02
ARHGEF39-205ENST00000490638 IGF2BP3O00425 579 aaKnown RBP eCLIP14.96□□□□□ -0.02
ARHGEF39-205ENST00000490638 STIP1P31948 543 aaKnown RBP14.96□□□□□ -0.02
ARHGEF39-205ENST00000490638 GTF2H3Q13889 308 aa14.96□□□□□ -0.02
ARHGEF39-205ENST00000490638 BSNDQ8WZ55 320 aa14.96□□□□□ -0.02
ARHGEF39-205ENST00000490638 SERPINB11Q96P15 392 aa14.96□□□□□ -0.02
ARHGEF39-205ENST00000490638 MARCH2Q9P0N8 246 aa14.96□□□□□ -0.02
ARHGEF39-205ENST00000490638 PTCH2Q9Y6C5 1203 aa14.96□□□□□ -0.02
ARHGEF39-205ENST00000490638 CFAP99D6REC4 459 aa14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 MAP3K7O43318 606 aa14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 SYDE1Q6ZW31 735 aaPredicted RBP14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 TFAP2DQ7Z6R9 452 aa14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 RBM23Q86U06 439 aaKnown RBP14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 HERC6Q8IVU3 1022 aa14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 LRRC52Q8N7C0 313 aa14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 SCLYQ96I15 445 aa14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 ZCCHC17Q9NP64 241 aaKnown RBP14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 ACP6Q9NPH0 428 aa14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 OLA1Q9NTK5 396 aaKnown RBP14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 MRFAP1Q9Y605 127 aa14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 SCN11AQ9UI33 1791 aa14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 ZNF536O15090 1300 aa14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 STX7O15400 261 aaKnown RBP14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 ARHGAP1Q07960 439 aa14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 CNGA2Q16280 664 aa14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 FAXCQ5TGI0 409 aa14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 NAPEPLDQ6IQ20 393 aa14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 RETSATQ6NUM9 610 aa14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 B3GALNT2Q8NCR0 500 aa14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 APOL5Q9BWW9 433 aa14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 LATS2Q9NRM7 1088 aa14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 CDH9Q9ULB4 789 aa14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 URB1O60287 2271 aaKnown RBP14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 ATP8B1O43520 1251 aa14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 TSPAN3O60637 253 aa14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 JCHAINP01591 159 aa14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 BMP6P22004 513 aa14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 CYP2C18P33260 490 aa14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 TMPRSS15P98073 1019 aa14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 TMA16Q96EY4 203 aaKnown RBP14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 PPP1R2P1Q96PQ5 205 aa14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 CORO1BQ9BR76 489 aa14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 SLC13A1Q9BZW2 595 aa14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 SNED1Q8TER0 1413 aa14.95□□□□□ -0.02
ARHGEF39-205ENST00000490638 RNASEH1O60930 286 aaKnown RBP14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 SUN1O94901 812 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms