RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 STKLD1Q8NE28 680 aa11.03□□□□□ -0.64
TTC28-207ENST00000490475 OR6B3Q8NGW1 331 aa11.03□□□□□ -0.64
TTC28-207ENST00000490475 TMEM174Q8WUU8 243 aa11.03□□□□□ -0.64
TTC28-207ENST00000490475 KBTBD7Q8WVZ9 684 aa11.03□□□□□ -0.64
TTC28-207ENST00000490475 OVCA2Q8WZ82 227 aa11.03□□□□□ -0.64
TTC28-207ENST00000490475 CD101Q93033 1021 aa11.03□□□□□ -0.64
TTC28-207ENST00000490475 MYLPFQ96A32 169 aa11.03□□□□□ -0.64
TTC28-207ENST00000490475 CCDC127Q96BQ5 260 aa11.03□□□□□ -0.64
TTC28-207ENST00000490475 TNIP3Q96KP6 325 aa11.03□□□□□ -0.64
TTC28-207ENST00000490475 TTLL2Q9BWV7 592 aa11.03□□□□□ -0.64
TTC28-207ENST00000490475 DNAI2Q9GZS0 605 aa11.03□□□□□ -0.64
TTC28-207ENST00000490475 MAN1B1Q9UKM7 699 aa11.03□□□□□ -0.64
TTC28-207ENST00000490475 TRAF3IP3Q9Y228 551 aa11.03□□□□□ -0.64
TTC28-207ENST00000490475 HELZP42694 1942 aaKnown RBP11.03□□□□□ -0.64
TTC28-207ENST00000490475 PTPRJQ12913 1337 aa11.03□□□□□ -0.64
TTC28-207ENST00000490475 SPTBN2O15020 2390 aa11.03□□□□□ -0.64
TTC28-207ENST00000490475 ATG2BQ96BY7 2078 aa11.02□□□□□ -0.64
TTC28-207ENST00000490475 NCOR2Q9Y618 2525 aa11.02□□□□□ -0.64
TTC28-207ENST00000490475 TPRP12270 2363 aaKnown RBP11.02□□□□□ -0.65
TTC28-207ENST00000490475 SLC30A4O14863 429 aa11.02□□□□□ -0.65
TTC28-207ENST00000490475 CALUO43852 315 aaPredicted RBP11.02□□□□□ -0.65
TTC28-207ENST00000490475 RNF40O75150 1001 aa11.02□□□□□ -0.65
TTC28-207ENST00000490475 PHACTR2O75167 634 aa11.02□□□□□ -0.65
TTC28-207ENST00000490475 TADA3O75528 432 aa11.02□□□□□ -0.65
TTC28-207ENST00000490475 BMP6P22004 513 aa11.02□□□□□ -0.65
TTC28-207ENST00000490475 BDNFP23560 247 aa11.02□□□□□ -0.65
TTC28-207ENST00000490475 EIF2DP41214 584 aaKnown RBP11.02□□□□□ -0.65
TTC28-207ENST00000490475 GALK1P51570 392 aa11.02□□□□□ -0.65
TTC28-207ENST00000490475 ELF2Q15723 593 aa11.02□□□□□ -0.65
TTC28-207ENST00000490475 LPAL2Q16609 132 aa11.02□□□□□ -0.65
TTC28-207ENST00000490475 HSF5Q4G112 596 aaPredicted RBP11.02□□□□□ -0.65
TTC28-207ENST00000490475 SDHAF4Q5VUM1 108 aa11.02□□□□□ -0.65
TTC28-207ENST00000490475 TRIM68Q6AZZ1 485 aa11.02□□□□□ -0.65
TTC28-207ENST00000490475 FSTL4Q6MZW2 842 aa11.02□□□□□ -0.65
TTC28-207ENST00000490475 NUDT18Q6ZVK8 323 aa11.02□□□□□ -0.65
TTC28-207ENST00000490475 OSTM1Q86WC4 334 aa11.02□□□□□ -0.65
TTC28-207ENST00000490475 SLC9A9Q8IVB4 645 aa11.02□□□□□ -0.65
TTC28-207ENST00000490475 ARL14EPQ8N8R7 260 aaPredicted RBP11.02□□□□□ -0.65
TTC28-207ENST00000490475 C12orf50Q8NA57 414 aaPredicted RBP11.02□□□□□ -0.65
TTC28-207ENST00000490475 PLEKHO2Q8TD55 490 aa11.02□□□□□ -0.65
TTC28-207ENST00000490475 SH3RF2Q8TEC5 729 aa11.02□□□□□ -0.65
TTC28-207ENST00000490475 ZNF516Q92618 1163 aa11.02□□□□□ -0.65
TTC28-207ENST00000490475 OTUB2Q96DC9 234 aa11.02□□□□□ -0.65
TTC28-207ENST00000490475 EEF2KMTQ96G04 330 aa11.02□□□□□ -0.65
TTC28-207ENST00000490475 PCED1BQ96HM7 432 aa11.02□□□□□ -0.65
TTC28-207ENST00000490475 GZF1Q9H116 711 aaPredicted RBP11.02□□□□□ -0.65
TTC28-207ENST00000490475 VRTNQ9H8Y1 702 aa11.02□□□□□ -0.65
TTC28-207ENST00000490475 CRTAC1Q9NQ79 661 aa11.02□□□□□ -0.65
TTC28-207ENST00000490475 COMMD8Q9NX08 183 aa11.02□□□□□ -0.65
TTC28-207ENST00000490475 GCNT4Q9P109 453 aa11.02□□□□□ -0.65
TTC28-207ENST00000490475 TBC1D14Q9P2M4 693 aa11.02□□□□□ -0.65
TTC28-207ENST00000490475 EBF1Q9UH73 591 aa11.02□□□□□ -0.65
TTC28-207ENST00000490475 SDK1Q7Z5N4 2213 aa11.01□□□□□ -0.65
TTC28-207ENST00000490475 MED19A0JLT2 244 aaPredicted RBP11.01□□□□□ -0.65
TTC28-207ENST00000490475 A8MXQ7 604 aa11.01□□□□□ -0.65
TTC28-207ENST00000490475 AXIN1O15169 862 aa11.01□□□□□ -0.65
TTC28-207ENST00000490475 RHOBTB1O94844 696 aa11.01□□□□□ -0.65
TTC28-207ENST00000490475 APBB3O95704 486 aa11.01□□□□□ -0.65
TTC28-207ENST00000490475 CST3P01034 146 aaPredicted RBP11.01□□□□□ -0.65
TTC28-207ENST00000490475 PDGFRBP09619 1106 aa11.01□□□□□ -0.65
TTC28-207ENST00000490475 ARSAP15289 507 aa11.01□□□□□ -0.65
TTC28-207ENST00000490475 CD44P16070 742 aaKnown RBP11.01□□□□□ -0.65
TTC28-207ENST00000490475 PTPN1P18031 435 aaKnown RBP11.01□□□□□ -0.65
TTC28-207ENST00000490475 PTMSP20962 102 aa11.01□□□□□ -0.65
TTC28-207ENST00000490475 LMO2P25791 158 aa11.01□□□□□ -0.65
TTC28-207ENST00000490475 LIMK1P53667 647 aa11.01□□□□□ -0.65
TTC28-207ENST00000490475 PSMC1P62191 440 aaKnown RBP11.01□□□□□ -0.65
TTC28-207ENST00000490475 SLC7A9P82251 487 aa11.01□□□□□ -0.65
TTC28-207ENST00000490475 ADAM9Q13443 819 aa11.01□□□□□ -0.65
TTC28-207ENST00000490475 EML3Q32P44 896 aa11.01□□□□□ -0.65
TTC28-207ENST00000490475 CEP135Q66GS9 1140 aa11.01□□□□□ -0.65
TTC28-207ENST00000490475 ANKRD40Q6AI12 368 aa11.01□□□□□ -0.65
TTC28-207ENST00000490475 FAM160A2Q8N612 972 aaPredicted RBP11.01□□□□□ -0.65
TTC28-207ENST00000490475 B3GALNT2Q8NCR0 500 aa11.01□□□□□ -0.65
TTC28-207ENST00000490475 TAF4BQ92750 862 aa11.01□□□□□ -0.65
TTC28-207ENST00000490475 ZC3H10Q96K80 434 aaKnown RBP11.01□□□□□ -0.65
TTC28-207ENST00000490475 GBP4Q96PP9 640 aa11.01□□□□□ -0.65
TTC28-207ENST00000490475 CYP2S1Q96SQ9 504 aa11.01□□□□□ -0.65
TTC28-207ENST00000490475 PARD6AQ9NPB6 346 aa11.01□□□□□ -0.65
TTC28-207ENST00000490475 CNOT1A5YKK6 2376 aaKnown RBP11.01□□□□□ -0.65
TTC28-207ENST00000490475 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11□□□□□ -0.65
TTC28-207ENST00000490475 C2orf78A6NCI8 922 aa11□□□□□ -0.65
TTC28-207ENST00000490475 ZNF840PA6NDX5 716 aa11□□□□□ -0.65
TTC28-207ENST00000490475 OTOL1A6NHN0 477 aaPredicted RBP11□□□□□ -0.65
TTC28-207ENST00000490475 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11□□□□□ -0.65
TTC28-207ENST00000490475 PPP1R3GB7ZBB8 358 aa11□□□□□ -0.65
TTC28-207ENST00000490475 F8VP50 259 aa11□□□□□ -0.65
TTC28-207ENST00000490475 ATP2C2O75185 946 aa11□□□□□ -0.65
TTC28-207ENST00000490475 CLSTN1O94985 981 aa11□□□□□ -0.65
TTC28-207ENST00000490475 EPN2O95208 641 aa11□□□□□ -0.65
TTC28-207ENST00000490475 OLFM2O95897 454 aa11□□□□□ -0.65
TTC28-207ENST00000490475 ADH1CP00326 375 aa11□□□□□ -0.65
TTC28-207ENST00000490475 EGFP01133 1207 aa11□□□□□ -0.65
TTC28-207ENST00000490475 ZNF806P0C7X5 589 aa11□□□□□ -0.65
TTC28-207ENST00000490475 NR2F2P24468 414 aa11□□□□□ -0.65
TTC28-207ENST00000490475 RAP1GAPP47736 663 aa11□□□□□ -0.65
TTC28-207ENST00000490475 TUBP50607 506 aa11□□□□□ -0.65
TTC28-207ENST00000490475 CDR1P51861 262 aa11□□□□□ -0.65
TTC28-207ENST00000490475 PMS1P54277 932 aaKnown RBP11□□□□□ -0.65
TTC28-207ENST00000490475 DLG4P78352 724 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms