RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 EML3Q32P44 896 aa10.35□□□□□ -0.75
TMEM39A-210ENST00000490099 ZNF667Q5HYK9 610 aa10.35□□□□□ -0.75
TMEM39A-210ENST00000490099 TRIM68Q6AZZ1 485 aa10.35□□□□□ -0.75
TMEM39A-210ENST00000490099 FSTL4Q6MZW2 842 aa10.35□□□□□ -0.75
TMEM39A-210ENST00000490099 Q6ZS52 159 aa10.35□□□□□ -0.75
TMEM39A-210ENST00000490099 UNC93AQ86WB7 457 aa10.35□□□□□ -0.75
TMEM39A-210ENST00000490099 FUKQ8N0W3 1084 aa10.35□□□□□ -0.75
TMEM39A-210ENST00000490099 FMR1NBQ8N0W7 255 aaPredicted RBP10.35□□□□□ -0.75
TMEM39A-210ENST00000490099 ARL14EPQ8N8R7 260 aaPredicted RBP10.35□□□□□ -0.75
TMEM39A-210ENST00000490099 ENGASEQ8NFI3 743 aa10.35□□□□□ -0.75
TMEM39A-210ENST00000490099 OSCP1Q8WVF1 389 aa10.35□□□□□ -0.75
TMEM39A-210ENST00000490099 DUSP9Q99956 384 aaKnown RBP10.35□□□□□ -0.75
TMEM39A-210ENST00000490099 RNF38Q9H0F5 515 aa10.35□□□□□ -0.75
TMEM39A-210ENST00000490099 EBF3Q9H4W6 596 aa10.35□□□□□ -0.75
TMEM39A-210ENST00000490099 SMYD3Q9H7B4 428 aa10.35□□□□□ -0.75
TMEM39A-210ENST00000490099 ECT2Q9H8V3 914 aa10.35□□□□□ -0.75
TMEM39A-210ENST00000490099 FBRSL1Q9HCM7 1045 aaKnown RBP10.35□□□□□ -0.75
TMEM39A-210ENST00000490099 CSNK1G1Q9HCP0 422 aa10.35□□□□□ -0.75
TMEM39A-210ENST00000490099 C2orf42Q9NWW7 574 aa10.35□□□□□ -0.75
TMEM39A-210ENST00000490099 CCDC163A0A0D9SF12 145 aa10.34□□□□□ -0.75
TMEM39A-210ENST00000490099 CLDN5O00501 218 aa10.34□□□□□ -0.75
TMEM39A-210ENST00000490099 HRO43593 1189 aa10.34□□□□□ -0.75
TMEM39A-210ENST00000490099 CALUO43852 315 aaPredicted RBP10.34□□□□□ -0.75
TMEM39A-210ENST00000490099 PHACTR2O75167 634 aa10.34□□□□□ -0.75
TMEM39A-210ENST00000490099 ZDHHC11BP0C7U3 371 aa10.34□□□□□ -0.75
TMEM39A-210ENST00000490099 CNR2P34972 360 aa10.34□□□□□ -0.75
TMEM39A-210ENST00000490099 GJA4P35212 333 aa10.34□□□□□ -0.75
TMEM39A-210ENST00000490099 ASPAP45381 313 aa10.34□□□□□ -0.75
TMEM39A-210ENST00000490099 GALK1P51570 392 aa10.34□□□□□ -0.75
TMEM39A-210ENST00000490099 VAMP7P51809 220 aa10.34□□□□□ -0.75
TMEM39A-210ENST00000490099 AMPD2Q01433 879 aa10.34□□□□□ -0.75
TMEM39A-210ENST00000490099 PPP3CAQ08209 521 aa10.34□□□□□ -0.75
TMEM39A-210ENST00000490099 INCA1Q0VD86 236 aa10.34□□□□□ -0.75
TMEM39A-210ENST00000490099 TAF10Q12962 218 aa10.34□□□□□ -0.75
TMEM39A-210ENST00000490099 DSG2Q14126 1118 aa10.34□□□□□ -0.75
TMEM39A-210ENST00000490099 GAB4Q2WGN9 574 aa10.34□□□□□ -0.75
TMEM39A-210ENST00000490099 EDRF1Q3B7T1 1238 aa10.34□□□□□ -0.75
TMEM39A-210ENST00000490099 COBLL1Q53SF7 1204 aa10.34□□□□□ -0.75
TMEM39A-210ENST00000490099 INTS8Q75QN2 995 aaKnown RBP10.34□□□□□ -0.75
TMEM39A-210ENST00000490099 NUP93Q8N1F7 819 aa10.34□□□□□ -0.75
TMEM39A-210ENST00000490099 TTC8Q8TAM2 541 aa10.34□□□□□ -0.75
TMEM39A-210ENST00000490099 SH3RF2Q8TEC5 729 aa10.34□□□□□ -0.75
TMEM39A-210ENST00000490099 OVCA2Q8WZ82 227 aa10.34□□□□□ -0.75
TMEM39A-210ENST00000490099 EZH1Q92800 747 aaPredicted RBP10.34□□□□□ -0.75
TMEM39A-210ENST00000490099 FAXDC2Q96IV6 333 aa10.34□□□□□ -0.75
TMEM39A-210ENST00000490099 TNIP3Q96KP6 325 aa10.34□□□□□ -0.75
TMEM39A-210ENST00000490099 KCNK16Q96T55 309 aa10.34□□□□□ -0.75
TMEM39A-210ENST00000490099 LINC00597Q9H2U6 94 aa10.34□□□□□ -0.75
TMEM39A-210ENST00000490099 COMMD8Q9NX08 183 aa10.34□□□□□ -0.75
TMEM39A-210ENST00000490099 TRPM5Q9NZQ8 1165 aa10.34□□□□□ -0.75
TMEM39A-210ENST00000490099 FRMD4BQ9Y2L6 1034 aa10.34□□□□□ -0.75
TMEM39A-210ENST00000490099 HLA-DRAP01903 254 aa10.33□□□□□ -0.76
TMEM39A-210ENST00000490099 CKMP06732 381 aa10.33□□□□□ -0.76
TMEM39A-210ENST00000490099 DRD1P21728 446 aa10.33□□□□□ -0.76
TMEM39A-210ENST00000490099 NR2F2P24468 414 aa10.33□□□□□ -0.76
TMEM39A-210ENST00000490099 RPL13P26373 211 aaKnown RBP10.33□□□□□ -0.76
TMEM39A-210ENST00000490099 ANXA13P27216 316 aa10.33□□□□□ -0.76
TMEM39A-210ENST00000490099 GTF2H1P32780 548 aa10.33□□□□□ -0.76
TMEM39A-210ENST00000490099 RAP1GAPP47736 663 aa10.33□□□□□ -0.76
TMEM39A-210ENST00000490099 DMWDQ09019 674 aa10.33□□□□□ -0.76
TMEM39A-210ENST00000490099 BIRC3Q13489 604 aa10.33□□□□□ -0.76
TMEM39A-210ENST00000490099 CEP135Q66GS9 1140 aa10.33□□□□□ -0.76
TMEM39A-210ENST00000490099 CC2D1AQ6P1N0 951 aaPredicted RBP10.33□□□□□ -0.76
TMEM39A-210ENST00000490099 PKN3Q6P5Z2 889 aa10.33□□□□□ -0.76
TMEM39A-210ENST00000490099 FAM35AQ86V20 835 aa10.33□□□□□ -0.76
TMEM39A-210ENST00000490099 ZC3H3Q8IXZ2 948 aaKnown RBP10.33□□□□□ -0.76
TMEM39A-210ENST00000490099 ELOA2Q8IYF1 753 aaPredicted RBP10.33□□□□□ -0.76
TMEM39A-210ENST00000490099 ADGRG2Q8IZP9 1017 aa10.33□□□□□ -0.76
TMEM39A-210ENST00000490099 DCLK2Q8N568 766 aa10.33□□□□□ -0.76
TMEM39A-210ENST00000490099 ZMIZ2Q8NF64 920 aa10.33□□□□□ -0.76
TMEM39A-210ENST00000490099 TAS1R2Q8TE23 839 aa10.33□□□□□ -0.76
TMEM39A-210ENST00000490099 WHAMMQ8TF30 809 aa10.33□□□□□ -0.76
TMEM39A-210ENST00000490099 ATP2A3Q93084 1043 aa10.33□□□□□ -0.76
TMEM39A-210ENST00000490099 CCDC47Q96A33 483 aaKnown RBP10.33□□□□□ -0.76
TMEM39A-210ENST00000490099 ELMO3Q96BJ8 720 aa10.33□□□□□ -0.76
TMEM39A-210ENST00000490099 ZFRQ96KR1 1074 aaKnown RBP10.33□□□□□ -0.76
TMEM39A-210ENST00000490099 CYP3A43Q9HB55 503 aa10.33□□□□□ -0.76
TMEM39A-210ENST00000490099 APOBEC3GQ9HC16 384 aaKnown RBP10.33□□□□□ -0.76
TMEM39A-210ENST00000490099 GDPD2Q9HCC8 539 aa10.33□□□□□ -0.76
TMEM39A-210ENST00000490099 DUS2Q9NX74 493 aaKnown RBP10.33□□□□□ -0.76
TMEM39A-210ENST00000490099 MAPK8IP1Q9UQF2 711 aa10.33□□□□□ -0.76
TMEM39A-210ENST00000490099 ZNF638Q14966 1978 aaKnown RBP10.33□□□□□ -0.76
TMEM39A-210ENST00000490099 A0A0A0MRY4 1105 aa10.32□□□□□ -0.76
TMEM39A-210ENST00000490099 LEFTY2O00292 366 aa10.32□□□□□ -0.76
TMEM39A-210ENST00000490099 BEST1O76090 585 aa10.32□□□□□ -0.76
TMEM39A-210ENST00000490099 RTN3O95197 1032 aaPredicted RBP10.32□□□□□ -0.76
TMEM39A-210ENST00000490099 EGFP01133 1207 aa10.32□□□□□ -0.76
TMEM39A-210ENST00000490099 P4HA1P13674 534 aa10.32□□□□□ -0.76
TMEM39A-210ENST00000490099 YWHAQP27348 245 aa10.32□□□□□ -0.76
TMEM39A-210ENST00000490099 PSMC2P35998 433 aaKnown RBP10.32□□□□□ -0.76
TMEM39A-210ENST00000490099 TUBP50607 506 aa10.32□□□□□ -0.76
TMEM39A-210ENST00000490099 NDST1P52848 882 aa10.32□□□□□ -0.76
TMEM39A-210ENST00000490099 GRSF1Q12849 480 aaKnown RBP eCLIP10.32□□□□□ -0.76
TMEM39A-210ENST00000490099 ADAM9Q13443 819 aa10.32□□□□□ -0.76
TMEM39A-210ENST00000490099 FBXO43Q4G163 708 aa10.32□□□□□ -0.76
TMEM39A-210ENST00000490099 PPP1R15BQ5SWA1 713 aa10.32□□□□□ -0.76
TMEM39A-210ENST00000490099 NAIF1Q69YI7 327 aaPredicted RBP10.32□□□□□ -0.76
TMEM39A-210ENST00000490099 ACOT1Q86TX2 421 aa10.32□□□□□ -0.76
TMEM39A-210ENST00000490099 WDR5BQ86VZ2 330 aa10.32□□□□□ -0.76
TMEM39A-210ENST00000490099 LONP2Q86WA8 852 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms