RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 FDXRP22570 491 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 TSPAN7P41732 249 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 HSPA7P48741 367 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 ITGA8P53708 1063 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 NOMO3P69849 1222 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 BLOC1S1P78537 153 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 MTM1Q13496 603 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 BLMHQ13867 455 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 CYP2A13Q16696 494 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 MPEG1Q2M385 716 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 NOMO2Q5JPE7 1267 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 KIAA1614Q5VZ46 1190 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 FASTKD5Q7L8L6 764 aaKnown RBP3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 SNX32Q86XE0 403 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 CELF5Q8N6W0 485 aaKnown RBP3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 NKAIN3Q8N8D7 197 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 SLC30A5Q8TAD4 765 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 NRG4Q8WWG1 115 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 SPATA5L1Q9BVQ7 753 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 AP1M1Q9BXS5 423 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 ARMT1Q9H993 441 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 ZCCHC17Q9NP64 241 aaKnown RBP3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 TMEM74BQ9NUR3 256 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 GIMAP2Q9UG22 337 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 MAST3O60307 1309 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 MYBBP1AQ9BQG0 1328 aaKnown RBP3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 TOP2BQ02880 1626 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 A6NLC8 198 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 FAM171A2A8MVW0 826 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 ACKR2O00590 384 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 KIAA0391O15091 583 aaKnown RBP3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 HTRA2O43464 458 aaPredicted RBP3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 DDCP20711 480 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 HOXD12P35452 270 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 KRT20P35900 424 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 UBA7P41226 1012 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 ATP8B2P98198 1209 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 ROR1Q01973 937 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 ICA1Q05084 483 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 BTKQ06187 659 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 PRKG2Q13237 762 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 TAF11Q15544 211 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 PFKFB4Q16877 469 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 SLC35G1Q2M3R5 365 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 ERCC6LQ2NKX8 1250 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 FAM205BPQ63HN1 556 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 FOXR2Q6PJQ5 311 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 Q6ZNX1 250 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 MAEAQ7L5Y9 396 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 ZSCAN30Q86W11 494 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 ANKRD18AQ8IVF6 992 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 ZNF713Q8N859 430 aaPredicted RBP3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 ZNF527Q8NB42 609 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 ANKRD52Q8NB46 1076 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 RSPH1Q8WYR4 309 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 ANKS1AQ92625 1134 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 RAB24Q969Q5 203 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 RRP36Q96EU6 259 aaKnown RBP3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 CYFIP2Q96F07 1278 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 BOD1Q96IK1 185 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 STK31Q9BXU1 1019 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 NUP62CLQ9H1M0 184 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 PLEKHA5Q9HAU0 1116 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 GALNT9Q9HCQ5 603 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 UBN1Q9NPG3 1134 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 TBCCD1Q9NVR7 557 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 HSFX1Q9UBD0 423 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 KCNE5Q9UJ90 142 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 MTO1Q9Y2Z2 717 aaKnown RBP3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 SNX13Q9Y5W8 968 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 NR2E3Q9Y5X4 410 aa3.66□□□□□ -1.82
DEPDC1-204ENST00000489862 FAM234BA2RU67 622 aa3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 CDHR4A6H8M9 788 aa3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 DNAJC9-AS1A6NH13 148 aa3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 CCDC154A6NI56 674 aa3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 LGALS16A8MUM7 142 aa3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 ADAMTS3O15072 1205 aa3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 TEX33O43247 280 aa3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 PLOD3O60568 738 aa3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 ERN1O75460 977 aaKnown RBP3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 JUPP14923 745 aa3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 OAS2P29728 719 aaKnown RBP3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 MAP2K6P52564 334 aa3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 DCAF7P61962 342 aa3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 RAB1AP62820 205 aa3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 IL10RAQ13651 578 aa3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 CDC37Q16543 378 aaPredicted RBP3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 FAM133BQ5BKY9 247 aaKnown RBP3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 SPATA1Q5VX52 437 aa3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 ENOSF1Q7L5Y1 443 aa3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 SESTD1Q86VW0 696 aa3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 RHOT1Q8IXI2 618 aa3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 FITM2Q8N6M3 262 aa3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 TBC1D15Q8TC07 691 aa3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 CENPIQ92674 756 aaPredicted RBP3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 HDAC2Q92769 488 aaKnown RBP3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 KAT5Q92993 513 aa3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 USP13Q92995 863 aaPredicted RBP3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 SECISBP2LQ93073 1101 aaKnown RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms