RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 MPZL3Q6UWV2 235 aa10.28□□□□□ -0.76
NOD1-208ENST00000489614 ISLR2Q6UXK2 745 aa10.28□□□□□ -0.76
NOD1-208ENST00000489614 RHPN2Q8IUC4 686 aa10.28□□□□□ -0.76
NOD1-208ENST00000489614 NCSTNQ92542 709 aa10.28□□□□□ -0.76
NOD1-208ENST00000489614 SEMA4DQ92854 862 aa10.28□□□□□ -0.76
NOD1-208ENST00000489614 NDEL1Q9GZM8 345 aa10.28□□□□□ -0.76
NOD1-208ENST00000489614 MIS12Q9H081 205 aa10.28□□□□□ -0.76
NOD1-208ENST00000489614 ARHGAP20Q9P2F6 1191 aa10.28□□□□□ -0.76
NOD1-208ENST00000489614 B4GALT5O43286 388 aa10.27□□□□□ -0.76
NOD1-208ENST00000489614 EXOC3O60645 756 aa10.27□□□□□ -0.76
NOD1-208ENST00000489614 FKTNO75072 461 aa10.27□□□□□ -0.76
NOD1-208ENST00000489614 TRPA1O75762 1119 aa10.27□□□□□ -0.76
NOD1-208ENST00000489614 STK10O94804 968 aaKnown RBP10.27□□□□□ -0.76
NOD1-208ENST00000489614 UNC5CO95185 931 aa10.27□□□□□ -0.76
NOD1-208ENST00000489614 TRIM49P0CI25 452 aa10.27□□□□□ -0.76
NOD1-208ENST00000489614 TRIM49CP0CI26 452 aa10.27□□□□□ -0.76
NOD1-208ENST00000489614 HARSP12081 509 aaKnown RBP10.27□□□□□ -0.76
NOD1-208ENST00000489614 COL6A2P12110 1019 aa10.27□□□□□ -0.76
NOD1-208ENST00000489614 PRKAR2AP13861 404 aaKnown RBP10.27□□□□□ -0.76
NOD1-208ENST00000489614 UCHL3P15374 230 aa10.27□□□□□ -0.76
NOD1-208ENST00000489614 ECHS1P30084 290 aa10.27□□□□□ -0.76
NOD1-208ENST00000489614 PTPN11Q06124 597 aaPredicted RBP10.27□□□□□ -0.76
NOD1-208ENST00000489614 ZACNQ401N2 412 aa10.27□□□□□ -0.76
NOD1-208ENST00000489614 XKR4Q5GH76 650 aa10.27□□□□□ -0.76
NOD1-208ENST00000489614 RFX8Q6ZV50 586 aa10.27□□□□□ -0.76
NOD1-208ENST00000489614 NME8Q8N427 588 aa10.27□□□□□ -0.76
NOD1-208ENST00000489614 SLAIN1Q8ND83 568 aa10.27□□□□□ -0.76
NOD1-208ENST00000489614 ARHGEF2Q92974 986 aaKnown RBP10.27□□□□□ -0.76
NOD1-208ENST00000489614 TSEN34Q9BSV6 310 aaKnown RBP10.27□□□□□ -0.76
NOD1-208ENST00000489614 LSM14BQ9BX40 385 aaKnown RBP10.27□□□□□ -0.76
NOD1-208ENST00000489614 PLVAPQ9BX97 442 aa10.27□□□□□ -0.76
NOD1-208ENST00000489614 CDHR5Q9HBB8 845 aa10.27□□□□□ -0.76
NOD1-208ENST00000489614 RXFP1Q9HBX9 757 aa10.27□□□□□ -0.76
NOD1-208ENST00000489614 AGO2Q9UKV8 859 aaKnown RBP10.27□□□□□ -0.76
NOD1-208ENST00000489614 DNAH12Q6ZR08 3092 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 A0A087WZ62 844 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 LRRC53A6NM62 1247 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 CAPN9O14815 690 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 PDE5AO76074 875 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 ACTN1P12814 892 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 PRLRP16471 622 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 COG7P83436 770 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 ALKAL1Q6UXT8 129 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 SERINC5Q86VE9 423 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 SIX5Q8N196 739 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 GDAP1Q8TB36 358 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 HELQQ8TDG4 1101 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 WNT8BQ93098 351 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 CENPTQ96BT3 561 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 SNX27Q96L92 541 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 CGRRF1Q99675 332 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 FDXACB1Q9BRP7 624 aaPredicted RBP10.27□□□□□ -0.77
NOD1-208ENST00000489614 TBC1D10AQ9BXI6 508 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 INTS2Q9H0H0 1204 aaKnown RBP10.27□□□□□ -0.77
NOD1-208ENST00000489614 AP5M1Q9H0R1 490 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 ISCUQ9H1K1 167 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 CDT1Q9H211 546 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 ADAM7Q9H2U9 754 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 FBXO9Q9UK97 447 aaPredicted RBP10.27□□□□□ -0.77
NOD1-208ENST00000489614 CNTN6Q9UQ52 1028 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 TMED5Q9Y3A6 229 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 TIMM22Q9Y584 194 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 SCN1AP35498 2009 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 SCN5AQ14524 2016 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 MICAL3Q7RTP6 2002 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 A0A1W2PQ67 120 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 SSU72P8A0A1W2PR75 194 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 SIGLEC16A6NMB1 481 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 HNRNPDLO14979 420 aaKnown RBP10.27□□□□□ -0.77
NOD1-208ENST00000489614 TREHO43280 583 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 LRRN2O75325 713 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 MCF2P10911 925 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 ELNP15502 786 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 PHKA2P46019 1235 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 LIG4P49917 911 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 ARFIP2P53365 341 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 SULT2A1Q06520 285 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 TBL3Q12788 808 aaKnown RBP10.27□□□□□ -0.77
NOD1-208ENST00000489614 STRN3Q13033 797 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 EEF1DP3Q658K8 133 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 SATL1Q86VE3 508 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 ZBTB8OSQ8IWT0 167 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 DNAJC5GQ8N7S2 189 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 ANKRD42Q8N9B4 389 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 SLC30A5Q8TAD4 765 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 DRC3Q9H069 523 aa10.27□□□□□ -0.77
NOD1-208ENST00000489614 FNDC1Q4ZHG4 1894 aaPredicted RBP10.27□□□□□ -0.77
NOD1-208ENST00000489614 KIAA1671Q9BY89 1806 aa10.26□□□□□ -0.77
NOD1-208ENST00000489614 OGTO15294 1046 aa10.26□□□□□ -0.77
NOD1-208ENST00000489614 RGS16O15492 202 aaPredicted RBP10.26□□□□□ -0.77
NOD1-208ENST00000489614 B4GALT4O60513 344 aa10.26□□□□□ -0.77
NOD1-208ENST00000489614 ZC3H11AO75152 810 aaKnown RBP eCLIP10.26□□□□□ -0.77
NOD1-208ENST00000489614 KRT36O76013 467 aa10.26□□□□□ -0.77
NOD1-208ENST00000489614 VTNP04004 478 aa10.26□□□□□ -0.77
NOD1-208ENST00000489614 HOXD10P28358 340 aa10.26□□□□□ -0.77
NOD1-208ENST00000489614 TNFSF9P41273 254 aa10.26□□□□□ -0.77
NOD1-208ENST00000489614 GEMIN4P57678 1058 aaKnown RBP10.26□□□□□ -0.77
NOD1-208ENST00000489614 MYL7Q01449 175 aa10.26□□□□□ -0.77
NOD1-208ENST00000489614 KIF22Q14807 665 aa10.26□□□□□ -0.77
NOD1-208ENST00000489614 MAPK6Q16659 721 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms