RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 FAM114A1Q8IWE2 563 aa14.16□□□□□ -0.14
CCL28-202ENST00000489442 ARL14EPQ8N8R7 260 aaPredicted RBP14.16□□□□□ -0.14
CCL28-202ENST00000489442 TMEM105Q8N8V8 129 aa14.16□□□□□ -0.14
CCL28-202ENST00000489442 SLC4A11Q8NBS3 891 aa14.16□□□□□ -0.14
CCL28-202ENST00000489442 EHBP1Q8NDI1 1231 aa14.16□□□□□ -0.14
CCL28-202ENST00000489442 PDZD8Q8NEN9 1154 aa14.16□□□□□ -0.14
CCL28-202ENST00000489442 SCAMP5Q8TAC9 235 aa14.16□□□□□ -0.14
CCL28-202ENST00000489442 USP13Q92995 863 aaPredicted RBP14.16□□□□□ -0.14
CCL28-202ENST00000489442 ZFYVE19Q96K21 471 aa14.16□□□□□ -0.14
CCL28-202ENST00000489442 FBXO44Q9H4M3 255 aa14.16□□□□□ -0.14
CCL28-202ENST00000489442 COMMD8Q9NX08 183 aa14.16□□□□□ -0.14
CCL28-202ENST00000489442 CHORDC1Q9UHD1 332 aaPredicted RBP14.16□□□□□ -0.14
CCL28-202ENST00000489442 CCL26Q9Y258 94 aa14.16□□□□□ -0.14
CCL28-202ENST00000489442 MRPS17Q9Y2R5 130 aaKnown RBP14.16□□□□□ -0.14
CCL28-202ENST00000489442 KIF26AQ9ULI4 1882 aaPredicted RBP14.16□□□□□ -0.14
CCL28-202ENST00000489442 MYO16Q9Y6X6 1858 aa14.16□□□□□ -0.14
CCL28-202ENST00000489442 NCANO14594 1321 aa14.16□□□□□ -0.14
CCL28-202ENST00000489442 HELZP42694 1942 aaKnown RBP14.16□□□□□ -0.14
CCL28-202ENST00000489442 KANSL1LA0AUZ9 987 aa14.15□□□□□ -0.14
CCL28-202ENST00000489442 ZNF840PA6NDX5 716 aa14.15□□□□□ -0.14
CCL28-202ENST00000489442 MAN2B1O00754 1011 aa14.15□□□□□ -0.14
CCL28-202ENST00000489442 PI15O43692 258 aa14.15□□□□□ -0.14
CCL28-202ENST00000489442 BEST1O76090 585 aa14.15□□□□□ -0.14
CCL28-202ENST00000489442 CD19P15391 556 aa14.15□□□□□ -0.14
CCL28-202ENST00000489442 CD72P21854 359 aa14.15□□□□□ -0.14
CCL28-202ENST00000489442 NUBP1P53384 320 aa14.15□□□□□ -0.14
CCL28-202ENST00000489442 RAD23BP54727 409 aa14.15□□□□□ -0.14
CCL28-202ENST00000489442 ZNF268Q14587 947 aaPredicted RBP14.15□□□□□ -0.14
CCL28-202ENST00000489442 SASS6Q6UVJ0 657 aa14.15□□□□□ -0.14
CCL28-202ENST00000489442 CLEC20AQ6ZU45 233 aa14.15□□□□□ -0.14
CCL28-202ENST00000489442 OVCA2Q8WZ82 227 aa14.15□□□□□ -0.14
CCL28-202ENST00000489442 LRRC3BQ96PB8 259 aa14.15□□□□□ -0.14
CCL28-202ENST00000489442 SLC22A12Q96S37 553 aa14.15□□□□□ -0.14
CCL28-202ENST00000489442 NELL2Q99435 816 aa14.15□□□□□ -0.14
CCL28-202ENST00000489442 FOXQ1Q9C009 403 aa14.15□□□□□ -0.14
CCL28-202ENST00000489442 THAP9Q9H5L6 903 aa14.15□□□□□ -0.14
CCL28-202ENST00000489442 CSNK1G1Q9HCP0 422 aa14.15□□□□□ -0.14
CCL28-202ENST00000489442 TRPV5Q9NQA5 729 aa14.15□□□□□ -0.14
CCL28-202ENST00000489442 GKN1Q9NS71 199 aa14.15□□□□□ -0.14
CCL28-202ENST00000489442 PCDHB4Q9Y5E5 795 aa14.15□□□□□ -0.14
CCL28-202ENST00000489442 PIAS3Q9Y6X2 628 aa14.15□□□□□ -0.14
CCL28-202ENST00000489442 FAM170BA6NMN3 283 aa14.15□□□□□ -0.15
CCL28-202ENST00000489442 TNFRSF10BO14763 440 aa14.15□□□□□ -0.15
CCL28-202ENST00000489442 NCAM2O15394 837 aa14.15□□□□□ -0.15
CCL28-202ENST00000489442 DCNP07585 359 aaKnown RBP14.15□□□□□ -0.15
CCL28-202ENST00000489442 PFKLP17858 780 aa14.15□□□□□ -0.15
CCL28-202ENST00000489442 ACO1P21399 889 aaKnown RBP14.15□□□□□ -0.15
CCL28-202ENST00000489442 SGO2Q562F6 1265 aa14.15□□□□□ -0.15
CCL28-202ENST00000489442 CT47A1Q5JQC4 288 aaPredicted RBP14.15□□□□□ -0.15
CCL28-202ENST00000489442 TMEM270Q6UE05 265 aa14.15□□□□□ -0.15
CCL28-202ENST00000489442 RRAGAQ7L523 313 aa14.15□□□□□ -0.15
CCL28-202ENST00000489442 ZMIZ2Q8NF64 920 aa14.15□□□□□ -0.15
CCL28-202ENST00000489442 PJA1Q8NG27 643 aa14.15□□□□□ -0.15
CCL28-202ENST00000489442 TTC8Q8TAM2 541 aa14.15□□□□□ -0.15
CCL28-202ENST00000489442 MED15Q96RN5 788 aa14.15□□□□□ -0.15
CCL28-202ENST00000489442 DUSP16Q9BY84 665 aa14.15□□□□□ -0.15
CCL28-202ENST00000489442 NACA2Q9H009 215 aa14.15□□□□□ -0.15
CCL28-202ENST00000489442 INTS2Q9H0H0 1204 aaKnown RBP14.15□□□□□ -0.15
CCL28-202ENST00000489442 GCNT4Q9P109 453 aa14.15□□□□□ -0.15
CCL28-202ENST00000489442 HESX1Q9UBX0 185 aa14.15□□□□□ -0.15
CCL28-202ENST00000489442 ARIH1Q9Y4X5 557 aaPredicted RBP14.15□□□□□ -0.15
CCL28-202ENST00000489442 PATJQ8NI35 1801 aa14.14□□□□□ -0.15
CCL28-202ENST00000489442 GLULP15104 373 aa14.14□□□□□ -0.15
CCL28-202ENST00000489442 ITPRIPL2Q3MIP1 535 aa14.14□□□□□ -0.15
CCL28-202ENST00000489442 HSP90AA4PQ58FG1 418 aa14.14□□□□□ -0.15
CCL28-202ENST00000489442 HECTD3Q5T447 861 aa14.14□□□□□ -0.15
CCL28-202ENST00000489442 GBP6Q6ZN66 633 aa14.14□□□□□ -0.15
CCL28-202ENST00000489442 LMO3Q8TAP4 145 aa14.14□□□□□ -0.15
CCL28-202ENST00000489442 SH3RF2Q8TEC5 729 aa14.14□□□□□ -0.15
CCL28-202ENST00000489442 CRACR2AQ9BSW2 395 aa14.14□□□□□ -0.15
CCL28-202ENST00000489442 C8orf33Q9H7E9 229 aaPredicted RBP14.14□□□□□ -0.15
CCL28-202ENST00000489442 PNPLA8Q9NP80 782 aa14.14□□□□□ -0.15
CCL28-202ENST00000489442 TLR8Q9NR97 1041 aaKnown RBP14.14□□□□□ -0.15
CCL28-202ENST00000489442 GTSE1Q9NYZ3 720 aa14.14□□□□□ -0.15
CCL28-202ENST00000489442 IL37Q9NZH6 218 aa14.14□□□□□ -0.15
CCL28-202ENST00000489442 GMIPQ9P107 970 aa14.14□□□□□ -0.15
CCL28-202ENST00000489442 KIAA1257Q9ULG3 409 aa14.14□□□□□ -0.15
CCL28-202ENST00000489442 NDRG2Q9UN36 371 aaKnown RBP14.14□□□□□ -0.15
CCL28-202ENST00000489442 CACNA1IQ9P0X4 2223 aa14.13□□□□□ -0.15
CCL28-202ENST00000489442 PES1O00541 588 aaKnown RBP14.13□□□□□ -0.15
CCL28-202ENST00000489442 GALR2O43603 387 aaPredicted RBP14.13□□□□□ -0.15
CCL28-202ENST00000489442 MBL2P11226 248 aaPredicted RBP14.13□□□□□ -0.15
CCL28-202ENST00000489442 VDRP11473 427 aa14.13□□□□□ -0.15
CCL28-202ENST00000489442 PRKCSHP14314 528 aaPredicted RBP14.13□□□□□ -0.15
CCL28-202ENST00000489442 IFNAR2P48551 515 aa14.13□□□□□ -0.15
CCL28-202ENST00000489442 PTPN5P54829 565 aa14.13□□□□□ -0.15
CCL28-202ENST00000489442 GCNT1Q02742 428 aa14.13□□□□□ -0.15
CCL28-202ENST00000489442 TNK2Q07912 1038 aa14.13□□□□□ -0.15
CCL28-202ENST00000489442 MTF1Q14872 753 aa14.13□□□□□ -0.15
CCL28-202ENST00000489442 GOLGA7BQ2TAP0 167 aa14.13□□□□□ -0.15
CCL28-202ENST00000489442 CCDC183Q5T5S1 534 aa14.13□□□□□ -0.15
CCL28-202ENST00000489442 ARHGAP17Q68EM7 881 aa14.13□□□□□ -0.15
CCL28-202ENST00000489442 C1orf228Q6PIY5 440 aa14.13□□□□□ -0.15
CCL28-202ENST00000489442 IRF2BP1Q8IU81 584 aa14.13□□□□□ -0.15
CCL28-202ENST00000489442 ARHGEF19Q8IW93 802 aa14.13□□□□□ -0.15
CCL28-202ENST00000489442 ANKRD52Q8NB46 1076 aa14.13□□□□□ -0.15
CCL28-202ENST00000489442 DTWD2Q8NBA8 298 aa14.13□□□□□ -0.15
CCL28-202ENST00000489442 FAM3CQ92520 227 aa14.13□□□□□ -0.15
CCL28-202ENST00000489442 KAT5Q92993 513 aa14.13□□□□□ -0.15
CCL28-202ENST00000489442 DDX23Q9BUQ8 820 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms