RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 TMEM200CA6NKL6 621 aa5.04□□□□□ -1.6
XRN1-213ENST00000489241 IPO5O00410 1097 aaKnown RBP5.04□□□□□ -1.6
XRN1-213ENST00000489241 TOR1BO14657 336 aa5.04□□□□□ -1.6
XRN1-213ENST00000489241 NCAM2O15394 837 aa5.04□□□□□ -1.6
XRN1-213ENST00000489241 CDKL5O76039 1030 aa5.04□□□□□ -1.6
XRN1-213ENST00000489241 KIF20AO95235 890 aa5.04□□□□□ -1.6
XRN1-213ENST00000489241 TNFRSF6BO95407 300 aa5.04□□□□□ -1.6
XRN1-213ENST00000489241 NUDT3O95989 172 aa5.04□□□□□ -1.6
XRN1-213ENST00000489241 ITGA5P08648 1049 aa5.04□□□□□ -1.6
XRN1-213ENST00000489241 XRCC6P12956 609 aaKnown RBP eCLIP5.04□□□□□ -1.6
XRN1-213ENST00000489241 FBLP22087 321 aaKnown RBP5.04□□□□□ -1.6
XRN1-213ENST00000489241 DDX6P26196 483 aaKnown RBP eCLIP5.04□□□□□ -1.6
XRN1-213ENST00000489241 COPAP53621 1224 aa5.04□□□□□ -1.6
XRN1-213ENST00000489241 RPS7P62081 194 aaKnown RBP5.04□□□□□ -1.6
XRN1-213ENST00000489241 CXADRP78310 365 aa5.04□□□□□ -1.6
XRN1-213ENST00000489241 SATB1Q01826 763 aa5.04□□□□□ -1.6
XRN1-213ENST00000489241 TAP1Q03518 808 aa5.04□□□□□ -1.6
XRN1-213ENST00000489241 ARHGAP15Q53QZ3 475 aa5.04□□□□□ -1.6
XRN1-213ENST00000489241 B3GNTL1Q67FW5 361 aaPredicted RBP5.04□□□□□ -1.6
XRN1-213ENST00000489241 LIN54Q6MZP7 749 aa5.04□□□□□ -1.6
XRN1-213ENST00000489241 TAPT1Q6NXT6 567 aa5.04□□□□□ -1.6
XRN1-213ENST00000489241 RFX8Q6ZV50 586 aa5.04□□□□□ -1.6
XRN1-213ENST00000489241 USP49Q70CQ1 688 aa5.04□□□□□ -1.6
XRN1-213ENST00000489241 PRIMA1Q86XR5 153 aa5.04□□□□□ -1.6
XRN1-213ENST00000489241 YAF2Q8IY57 180 aa5.04□□□□□ -1.6
XRN1-213ENST00000489241 GALNT15Q8N3T1 639 aa5.04□□□□□ -1.6
XRN1-213ENST00000489241 CCDC150Q8NCX0 1101 aa5.04□□□□□ -1.6
XRN1-213ENST00000489241 BEND2Q8NDZ0 799 aa5.04□□□□□ -1.6
XRN1-213ENST00000489241 NSUN7Q8NE18 718 aaKnown RBP5.04□□□□□ -1.6
XRN1-213ENST00000489241 STT3BQ8TCJ2 826 aa5.04□□□□□ -1.6
XRN1-213ENST00000489241 RAPGEF4Q8WZA2 1011 aa5.04□□□□□ -1.6
XRN1-213ENST00000489241 RNF31Q96EP0 1072 aa5.04□□□□□ -1.6
XRN1-213ENST00000489241 MPP4Q96JB8 637 aa5.04□□□□□ -1.6
XRN1-213ENST00000489241 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.04□□□□□ -1.67e-7■■■■□ 20.2
XRN1-213ENST00000489241 CYP4F11Q9HBI6 524 aa5.04□□□□□ -1.6
XRN1-213ENST00000489241 TMEM8AQ9HCN3 771 aa5.04□□□□□ -1.6
XRN1-213ENST00000489241 TMEM74BQ9NUR3 256 aa5.04□□□□□ -1.6
XRN1-213ENST00000489241 SCAF8Q9UPN6 1271 aaKnown RBP5.04□□□□□ -1.6
XRN1-213ENST00000489241 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.04□□□□□ -1.6
XRN1-213ENST00000489241 RAD54BQ9Y620 910 aa5.04□□□□□ -1.6
XRN1-213ENST00000489241 PRAMEF33A0A0G2JMD5 474 aa5.03□□□□□ -1.6
XRN1-213ENST00000489241 A0A1B0GVC2 190 aa5.03□□□□□ -1.6
XRN1-213ENST00000489241 RAB27BO00194 218 aa5.03□□□□□ -1.6
XRN1-213ENST00000489241 EIF3FO00303 357 aaPredicted RBP5.03□□□□□ -1.6
XRN1-213ENST00000489241 LPXNO60711 386 aa5.03□□□□□ -1.6
XRN1-213ENST00000489241 PRAMEF10O60809 474 aa5.03□□□□□ -1.6
XRN1-213ENST00000489241 VPS4BO75351 444 aa5.03□□□□□ -1.6
XRN1-213ENST00000489241 CYP2C9P11712 490 aa5.03□□□□□ -1.6
XRN1-213ENST00000489241 ACVR2AP27037 513 aa5.03□□□□□ -1.6
XRN1-213ENST00000489241 ANXA11P50995 505 aaKnown RBP5.03□□□□□ -1.6
XRN1-213ENST00000489241 WNT3P56703 355 aa5.03□□□□□ -1.6
XRN1-213ENST00000489241 GUCY1B3Q02153 619 aa5.03□□□□□ -1.6
XRN1-213ENST00000489241 DYRK1AQ13627 763 aa5.03□□□□□ -1.6
XRN1-213ENST00000489241 SLC29A2Q14542 456 aa5.03□□□□□ -1.6
XRN1-213ENST00000489241 HLXQ14774 488 aaPredicted RBP5.03□□□□□ -1.6
XRN1-213ENST00000489241 NPY5RQ15761 445 aa5.03□□□□□ -1.6
XRN1-213ENST00000489241 CYP2A13Q16696 494 aa5.03□□□□□ -1.6
XRN1-213ENST00000489241 PREPLQ4J6C6 727 aaPredicted RBP5.03□□□□□ -1.6
XRN1-213ENST00000489241 FCRL6Q6DN72 434 aa5.03□□□□□ -1.6
XRN1-213ENST00000489241 TANGO2Q6ICL3 276 aa5.03□□□□□ -1.6
XRN1-213ENST00000489241 Q6YL49 198 aa5.03□□□□□ -1.6
XRN1-213ENST00000489241 KIAA0408Q6ZU52 694 aa5.03□□□□□ -1.6
XRN1-213ENST00000489241 ARHGEF19Q8IW93 802 aa5.03□□□□□ -1.6
XRN1-213ENST00000489241 POC1BQ8TC44 478 aa5.03□□□□□ -1.6
XRN1-213ENST00000489241 HEYLQ9NQ87 328 aaPredicted RBP5.03□□□□□ -1.6
XRN1-213ENST00000489241 ZSCAN32Q9NX65 697 aa5.03□□□□□ -1.6
XRN1-213ENST00000489241 ETAA1Q9NY74 926 aa5.03□□□□□ -1.6
XRN1-213ENST00000489241 MAP3K20Q9NYL2 800 aaKnown RBP5.03□□□□□ -1.6
XRN1-213ENST00000489241 CTTNBP2NLQ9P2B4 639 aa5.03□□□□□ -1.6
XRN1-213ENST00000489241 PDP2Q9P2J9 529 aa5.03□□□□□ -1.6
XRN1-213ENST00000489241 CAPN11Q9UMQ6 739 aa5.03□□□□□ -1.6
XRN1-213ENST00000489241 LOC102723971A0A1B0GUV8 181 aa5.02□□□□□ -1.61
XRN1-213ENST00000489241 A0A1W2PS29 197 aa5.02□□□□□ -1.61
XRN1-213ENST00000489241 CCDC78A2IDD5 438 aa5.02□□□□□ -1.61
XRN1-213ENST00000489241 RRN3P2A6NIE6 340 aa5.02□□□□□ -1.61
XRN1-213ENST00000489241 H7C4K7 107 aa5.02□□□□□ -1.61
XRN1-213ENST00000489241 SUN1O94901 812 aa5.02□□□□□ -1.61
XRN1-213ENST00000489241 ITGALP20701 1170 aa5.02□□□□□ -1.61
XRN1-213ENST00000489241 ZEB1P37275 1124 aaPredicted RBP5.02□□□□□ -1.61
XRN1-213ENST00000489241 VIPR2P41587 438 aa5.02□□□□□ -1.61
XRN1-213ENST00000489241 TBX2Q13207 712 aaPredicted RBP5.02□□□□□ -1.61
XRN1-213ENST00000489241 BOP1Q14137 746 aaKnown RBP5.02□□□□□ -1.61
XRN1-213ENST00000489241 ARHGEF7Q14155 803 aa5.02□□□□□ -1.61
XRN1-213ENST00000489241 IQCB1Q15051 598 aa5.02□□□□□ -1.61
XRN1-213ENST00000489241 MAPKAPK3Q16644 382 aa5.02□□□□□ -1.61
XRN1-213ENST00000489241 TIGD6Q17RP2 521 aa5.02□□□□□ -1.61
XRN1-213ENST00000489241 TMTC4Q5T4D3 741 aa5.02□□□□□ -1.61
XRN1-213ENST00000489241 RAP1GAP2Q684P5 730 aa5.02□□□□□ -1.61
XRN1-213ENST00000489241 SP5Q6BEB4 398 aaPredicted RBP5.02□□□□□ -1.61
XRN1-213ENST00000489241 PLAG1Q6DJT9 500 aa5.02□□□□□ -1.61
XRN1-213ENST00000489241 SULT6B1Q6IMI4 303 aa5.02□□□□□ -1.61
XRN1-213ENST00000489241 MZT2AQ6P582 158 aa5.02□□□□□ -1.61
XRN1-213ENST00000489241 USP17L6PQ6QN14 398 aa5.02□□□□□ -1.61
XRN1-213ENST00000489241 CRTC1Q6UUV9 634 aa5.02□□□□□ -1.61
XRN1-213ENST00000489241 LAYNQ6UX15 382 aa5.02□□□□□ -1.61
XRN1-213ENST00000489241 GAS2L3Q86XJ1 694 aa5.02□□□□□ -1.61
XRN1-213ENST00000489241 Q8NA96 180 aa5.02□□□□□ -1.61
XRN1-213ENST00000489241 PSD4Q8NDX1 1056 aa5.02□□□□□ -1.61
XRN1-213ENST00000489241 SNX19Q92543 992 aa5.02□□□□□ -1.61
XRN1-213ENST00000489241 EID2BQ96D98 161 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms