RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 CACHD1Q5VU97 1274 aa4.51□□□□□ -1.69
RFC4-213ENST00000489028 CEP85Q6P2H3 762 aa4.51□□□□□ -1.69
RFC4-213ENST00000489028 SLC29A4Q7RTT9 530 aa4.51□□□□□ -1.69
RFC4-213ENST00000489028 DGKHQ86XP1 1220 aa4.51□□□□□ -1.69
RFC4-213ENST00000489028 FANCBQ8NB91 859 aa4.51□□□□□ -1.69
RFC4-213ENST00000489028 RP9Q8TA86 221 aaKnown RBP4.51□□□□□ -1.69
RFC4-213ENST00000489028 HASPINQ8TF76 798 aa4.51□□□□□ -1.69
RFC4-213ENST00000489028 DDB2Q92466 427 aa4.51□□□□□ -1.69
RFC4-213ENST00000489028 PRR25Q96S07 402 aa4.51□□□□□ -1.69
RFC4-213ENST00000489028 PPP1R9BQ96SB3 815 aa4.51□□□□□ -1.69
RFC4-213ENST00000489028 CHST8Q9H2A9 424 aa4.51□□□□□ -1.69
RFC4-213ENST00000489028 DDX21Q9NR30 783 aaKnown RBP eCLIP4.51□□□□□ -1.69
RFC4-213ENST00000489028 CHPF2Q9P2E5 772 aa4.51□□□□□ -1.69
RFC4-213ENST00000489028 MID2Q9UJV3 735 aa4.51□□□□□ -1.69
RFC4-213ENST00000489028 PAXBP1Q9Y5B6 917 aa4.51□□□□□ -1.69
RFC4-213ENST00000489028 LINC01548A6NM66 108 aa4.5□□□□□ -1.69
RFC4-213ENST00000489028 TISP43B9A030 160 aa4.5□□□□□ -1.69
RFC4-213ENST00000489028 CD3EAPO15446 510 aaKnown RBP4.5□□□□□ -1.69
RFC4-213ENST00000489028 RASSF9O75901 435 aa4.5□□□□□ -1.69
RFC4-213ENST00000489028 RASAL1O95294 804 aa4.5□□□□□ -1.69
RFC4-213ENST00000489028 TXNP10599 105 aaKnown RBP4.5□□□□□ -1.69
RFC4-213ENST00000489028 HGFP14210 728 aa4.5□□□□□ -1.69
RFC4-213ENST00000489028 FPR3P25089 353 aa4.5□□□□□ -1.69
RFC4-213ENST00000489028 BCAT1P54687 386 aa4.5□□□□□ -1.69
RFC4-213ENST00000489028 HTRA4P83105 476 aaPredicted RBP4.5□□□□□ -1.69
RFC4-213ENST00000489028 PSG6Q00889 435 aa4.5□□□□□ -1.69
RFC4-213ENST00000489028 PPP4R4Q6NUP7 873 aa4.5□□□□□ -1.69
RFC4-213ENST00000489028 ZNF66Q6ZN08 573 aa4.5□□□□□ -1.69
RFC4-213ENST00000489028 UNC13DQ70J99 1090 aa4.5□□□□□ -1.69
RFC4-213ENST00000489028 SRRM1Q8IYB3 904 aaKnown RBP4.5□□□□□ -1.69
RFC4-213ENST00000489028 SPARTQ8N0X7 666 aa4.5□□□□□ -1.69
RFC4-213ENST00000489028 ZBTB45Q96K62 511 aaPredicted RBP4.5□□□□□ -1.69
RFC4-213ENST00000489028 MSLNLQ96KJ4 702 aa4.5□□□□□ -1.69
RFC4-213ENST00000489028 TRIM5Q9C035 493 aa4.5□□□□□ -1.69
RFC4-213ENST00000489028 TRMT13Q9NUP7 481 aaKnown RBP4.5□□□□□ -1.69
RFC4-213ENST00000489028 ZSCAN32Q9NX65 697 aa4.5□□□□□ -1.69
RFC4-213ENST00000489028 CCNL1Q9UK58 526 aaPredicted RBP4.5□□□□□ -1.69
RFC4-213ENST00000489028 SMIM22K7EJ46 135 aa4.49□□□□□ -1.69
RFC4-213ENST00000489028 AP4M1O00189 453 aa4.49□□□□□ -1.69
RFC4-213ENST00000489028 RAB27BO00194 218 aa4.49□□□□□ -1.69
RFC4-213ENST00000489028 CCP110O43303 1012 aa4.49□□□□□ -1.69
RFC4-213ENST00000489028 JTBO76095 146 aa4.49□□□□□ -1.69
RFC4-213ENST00000489028 PRKCGP05129 697 aa4.49□□□□□ -1.69
RFC4-213ENST00000489028 NPSP0C0P6 89 aa4.49□□□□□ -1.69
RFC4-213ENST00000489028 ACVR2AP27037 513 aa4.49□□□□□ -1.69
RFC4-213ENST00000489028 UQCRC1P31930 480 aa4.49□□□□□ -1.69
RFC4-213ENST00000489028 TIAL1Q01085 375 aaKnown RBP eCLIP4.49□□□□□ -1.69
RFC4-213ENST00000489028 CCNIQ14094 377 aa4.49□□□□□ -1.69
RFC4-213ENST00000489028 ARHGEF7Q14155 803 aa4.49□□□□□ -1.69
RFC4-213ENST00000489028 INSCQ1MX18 579 aa4.49□□□□□ -1.69
RFC4-213ENST00000489028 ZNF750Q32MQ0 723 aa4.49□□□□□ -1.69
RFC4-213ENST00000489028 RNASE12Q5GAN4 147 aaKnown RBP4.49□□□□□ -1.69
RFC4-213ENST00000489028 SUMO4Q6EEV6 95 aa4.49□□□□□ -1.69
RFC4-213ENST00000489028 PTF1AQ7RTS3 328 aa4.49□□□□□ -1.69
RFC4-213ENST00000489028 ZNF804AQ7Z570 1209 aa4.49□□□□□ -1.69
RFC4-213ENST00000489028 SEMA6DQ8NFY4 1073 aa4.49□□□□□ -1.69
RFC4-213ENST00000489028 CYP2W1Q8TAV3 490 aa4.49□□□□□ -1.69
RFC4-213ENST00000489028 PUS7Q96PZ0 661 aaKnown RBP4.49□□□□□ -1.69
RFC4-213ENST00000489028 BTBD1Q9H0C5 482 aa4.49□□□□□ -1.69
RFC4-213ENST00000489028 LPAR3Q9UBY5 353 aa4.49□□□□□ -1.69
RFC4-213ENST00000489028 RGS17Q9UGC6 210 aaPredicted RBP4.49□□□□□ -1.69
RFC4-213ENST00000489028 HDAC9Q9UKV0 1011 aa4.49□□□□□ -1.69
RFC4-213ENST00000489028 CORO2BQ9UQ03 480 aa4.49□□□□□ -1.69
RFC4-213ENST00000489028 DRG1Q9Y295 367 aaKnown RBP4.49□□□□□ -1.69
RFC4-213ENST00000489028 FNDC1Q4ZHG4 1894 aaPredicted RBP4.49□□□□□ -1.69
RFC4-213ENST00000489028 LATS1O95835 1130 aa4.48□□□□□ -1.69
RFC4-213ENST00000489028 CARSP49589 748 aaKnown RBP4.48□□□□□ -1.69
RFC4-213ENST00000489028 CPT1AP50416 773 aa4.48□□□□□ -1.69
RFC4-213ENST00000489028 SRSF4Q08170 494 aaKnown RBP4.48□□□□□ -1.69
RFC4-213ENST00000489028 SLC29A2Q14542 456 aa4.48□□□□□ -1.69
RFC4-213ENST00000489028 KCNAB1Q14722 419 aa4.48□□□□□ -1.69
RFC4-213ENST00000489028 L1TD1Q5T7N2 865 aaKnown RBP4.48□□□□□ -1.69
RFC4-213ENST00000489028 KIRREL2Q6UWL6 708 aa4.48□□□□□ -1.69
RFC4-213ENST00000489028 KRT78Q8N1N4 520 aa4.48□□□□□ -1.69
RFC4-213ENST00000489028 ABHD11Q8NFV4 315 aa4.48□□□□□ -1.69
RFC4-213ENST00000489028 CTHRC1Q96CG8 243 aa4.48□□□□□ -1.69
RFC4-213ENST00000489028 WDYHV1Q96HA8 205 aa4.48□□□□□ -1.69
RFC4-213ENST00000489028 DHX36Q9H2U1 1008 aaKnown RBP4.48□□□□□ -1.69
RFC4-213ENST00000489028 DKK4Q9UBT3 224 aa4.48□□□□□ -1.69
RFC4-213ENST00000489028 ITGB1BP2Q9UKP3 347 aa4.48□□□□□ -1.69
RFC4-213ENST00000489028 COL3A1P02461 1466 aaPredicted RBP4.48□□□□□ -1.69
RFC4-213ENST00000489028 RGS10O43665 173 aa4.47□□□□□ -1.69
RFC4-213ENST00000489028 PQBP1O60828 265 aaKnown RBP4.47□□□□□ -1.69
RFC4-213ENST00000489028 PIAS2O75928 621 aa4.47□□□□□ -1.69
RFC4-213ENST00000489028 MT-ND5P03915 603 aa4.47□□□□□ -1.69
RFC4-213ENST00000489028 PRKCBP05771 671 aa4.47□□□□□ -1.69
RFC4-213ENST00000489028 SLC5A1P13866 664 aa4.47□□□□□ -1.69
RFC4-213ENST00000489028 BTF3P20290 206 aaKnown RBP4.47□□□□□ -1.69
RFC4-213ENST00000489028 GKP32189 559 aa4.47□□□□□ -1.69
RFC4-213ENST00000489028 PIK3CBP42338 1070 aa4.47□□□□□ -1.69
RFC4-213ENST00000489028 TIRAPP58753 221 aa4.47□□□□□ -1.69
RFC4-213ENST00000489028 PRAMEF17Q5VTA0 474 aa4.47□□□□□ -1.69
RFC4-213ENST00000489028 ZKSCAN2Q63HK3 967 aa4.47□□□□□ -1.69
RFC4-213ENST00000489028 PLAG1Q6DJT9 500 aa4.47□□□□□ -1.69
RFC4-213ENST00000489028 TRIM72Q6ZMU5 477 aa4.47□□□□□ -1.69
RFC4-213ENST00000489028 CHSY1Q86X52 802 aa4.47□□□□□ -1.69
RFC4-213ENST00000489028 PHKBQ93100 1093 aa4.47□□□□□ -1.69
RFC4-213ENST00000489028 RSPRY1Q96DX4 576 aa4.47□□□□□ -1.69
RFC4-213ENST00000489028 SNX22Q96L94 193 aa4.47□□□□□ -1.69
RFC4-213ENST00000489028 DPCDQ9BVM2 203 aaPredicted RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms