RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 SLC22A12Q96S37 553 aa14.66□□□□□ -0.06
SPTLC1-207ENST00000488921 CYP2S1Q96SQ9 504 aa14.66□□□□□ -0.06
SPTLC1-207ENST00000488921 NIF3L1Q9GZT8 377 aa14.66□□□□□ -0.06
SPTLC1-207ENST00000488921 MMRN2Q9H8L6 949 aa14.66□□□□□ -0.06
SPTLC1-207ENST00000488921 CYP3A43Q9HB55 503 aa14.66□□□□□ -0.06
SPTLC1-207ENST00000488921 KRT82Q9NSB4 513 aa14.66□□□□□ -0.06
SPTLC1-207ENST00000488921 COMMD8Q9NX08 183 aa14.66□□□□□ -0.06
SPTLC1-207ENST00000488921 DUS2Q9NX74 493 aaKnown RBP14.66□□□□□ -0.06
SPTLC1-207ENST00000488921 ZFHX2Q9C0A1 2572 aaPredicted RBP14.66□□□□□ -0.06
SPTLC1-207ENST00000488921 ZNF840PA6NDX5 716 aa14.65□□□□□ -0.06
SPTLC1-207ENST00000488921 SLC16A3O15427 465 aaKnown RBP14.65□□□□□ -0.06
SPTLC1-207ENST00000488921 AP1G2O75843 785 aa14.65□□□□□ -0.06
SPTLC1-207ENST00000488921 PPP1R2P41236 205 aa14.65□□□□□ -0.06
SPTLC1-207ENST00000488921 PRCPP42785 496 aa14.65□□□□□ -0.06
SPTLC1-207ENST00000488921 CXCL12P48061 93 aa14.65□□□□□ -0.06
SPTLC1-207ENST00000488921 MXI1P50539 228 aa14.65□□□□□ -0.06
SPTLC1-207ENST00000488921 NDST1P52848 882 aa14.65□□□□□ -0.06
SPTLC1-207ENST00000488921 LRRC63Q05C16 580 aa14.65□□□□□ -0.06
SPTLC1-207ENST00000488921 PPP3CAQ08209 521 aa14.65□□□□□ -0.06
SPTLC1-207ENST00000488921 INCA1Q0VD86 236 aa14.65□□□□□ -0.06
SPTLC1-207ENST00000488921 GRSF1Q12849 480 aaKnown RBP eCLIP14.65□□□□□ -0.06
SPTLC1-207ENST00000488921 IFRD2Q12894 506 aaPredicted RBP14.65□□□□□ -0.06
SPTLC1-207ENST00000488921 TAF10Q12962 218 aa14.65□□□□□ -0.06
SPTLC1-207ENST00000488921 NR1H3Q13133 447 aa14.65□□□□□ -0.06
SPTLC1-207ENST00000488921 CCINQ13939 588 aa14.65□□□□□ -0.06
SPTLC1-207ENST00000488921 SPOPLQ6IQ16 392 aa14.65□□□□□ -0.06
SPTLC1-207ENST00000488921 DDX42Q86XP3 938 aaKnown RBP eCLIP14.65□□□□□ -0.06
SPTLC1-207ENST00000488921 FUKQ8N0W3 1084 aa14.65□□□□□ -0.06
SPTLC1-207ENST00000488921 CRYBG2Q8N1P7 616 aa14.65□□□□□ -0.06
SPTLC1-207ENST00000488921 TTC39CQ8N584 583 aa14.65□□□□□ -0.06
SPTLC1-207ENST00000488921 SPATA20Q8TB22 786 aa14.65□□□□□ -0.06
SPTLC1-207ENST00000488921 RIN3Q8TB24 985 aa14.65□□□□□ -0.06
SPTLC1-207ENST00000488921 TAS1R2Q8TE23 839 aa14.65□□□□□ -0.06
SPTLC1-207ENST00000488921 FBXO32Q969P5 355 aa14.65□□□□□ -0.06
SPTLC1-207ENST00000488921 FAXDC2Q96IV6 333 aa14.65□□□□□ -0.06
SPTLC1-207ENST00000488921 TMEM30AQ9NV96 361 aa14.65□□□□□ -0.06
SPTLC1-207ENST00000488921 PAPSS2O95340 614 aaPredicted RBP14.64□□□□□ -0.07
SPTLC1-207ENST00000488921 NFATC1O95644 943 aa14.64□□□□□ -0.07
SPTLC1-207ENST00000488921 OLFM2O95897 454 aa14.64□□□□□ -0.07
SPTLC1-207ENST00000488921 ABL1P00519 1130 aa14.64□□□□□ -0.07
SPTLC1-207ENST00000488921 OAS1P00973 400 aaKnown RBP14.64□□□□□ -0.07
SPTLC1-207ENST00000488921 CCDC130P13994 396 aa14.64□□□□□ -0.07
SPTLC1-207ENST00000488921 ARSAP15289 507 aa14.64□□□□□ -0.07
SPTLC1-207ENST00000488921 SLC5A3P53794 718 aa14.64□□□□□ -0.07
SPTLC1-207ENST00000488921 MCCD1P59942 119 aaPredicted RBP14.64□□□□□ -0.07
SPTLC1-207ENST00000488921 SLC7A9P82251 487 aa14.64□□□□□ -0.07
SPTLC1-207ENST00000488921 FKBP3Q00688 224 aaKnown RBP14.64□□□□□ -0.07
SPTLC1-207ENST00000488921 TMEM196Q5HYL7 178 aa14.64□□□□□ -0.07
SPTLC1-207ENST00000488921 TSSK4Q6SA08 328 aa14.64□□□□□ -0.07
SPTLC1-207ENST00000488921 ELOA2Q8IYF1 753 aaPredicted RBP14.64□□□□□ -0.07
SPTLC1-207ENST00000488921 FBXL13Q8NEE6 735 aa14.64□□□□□ -0.07
SPTLC1-207ENST00000488921 SLC2A14Q8TDB8 520 aa14.64□□□□□ -0.07
SPTLC1-207ENST00000488921 ELMO3Q96BJ8 720 aa14.64□□□□□ -0.07
SPTLC1-207ENST00000488921 NT5C1AQ9BXI3 368 aa14.64□□□□□ -0.07
SPTLC1-207ENST00000488921 FAM124BQ9H5Z6 455 aaPredicted RBP14.64□□□□□ -0.07
SPTLC1-207ENST00000488921 ECT2Q9H8V3 914 aa14.64□□□□□ -0.07
SPTLC1-207ENST00000488921 RBM12Q9NTZ6 932 aaKnown RBP14.64□□□□□ -0.07
SPTLC1-207ENST00000488921 CIZ1Q9ULV3 898 aaPredicted RBP14.64□□□□□ -0.07
SPTLC1-207ENST00000488921 PCDHA5Q9Y5H7 936 aa14.64□□□□□ -0.07
SPTLC1-207ENST00000488921 CFAP54Q96N23 3096 aa14.63□□□□□ -0.07
SPTLC1-207ENST00000488921 LEFTY2O00292 366 aa14.63□□□□□ -0.07
SPTLC1-207ENST00000488921 TRDMT1O14717 391 aaKnown RBP14.63□□□□□ -0.07
SPTLC1-207ENST00000488921 SLC9A3R1O14745 358 aaPredicted RBP14.63□□□□□ -0.07
SPTLC1-207ENST00000488921 PSMA7O14818 248 aa14.63□□□□□ -0.07
SPTLC1-207ENST00000488921 LILRB5O75023 590 aa14.63□□□□□ -0.07
SPTLC1-207ENST00000488921 FAM200BP0CF97 657 aa14.63□□□□□ -0.07
SPTLC1-207ENST00000488921 TDGF1P13385 188 aa14.63□□□□□ -0.07
SPTLC1-207ENST00000488921 DRD1P21728 446 aa14.63□□□□□ -0.07
SPTLC1-207ENST00000488921 GJA4P35212 333 aa14.63□□□□□ -0.07
SPTLC1-207ENST00000488921 TUBP50607 506 aa14.63□□□□□ -0.07
SPTLC1-207ENST00000488921 SATB1Q01826 763 aa14.63□□□□□ -0.07
SPTLC1-207ENST00000488921 EML3Q32P44 896 aa14.63□□□□□ -0.07
SPTLC1-207ENST00000488921 TCERG1LQ5VWI1 586 aa14.63□□□□□ -0.07
SPTLC1-207ENST00000488921 PAQR9Q6ZVX9 377 aa14.63□□□□□ -0.07
SPTLC1-207ENST00000488921 RUBCNQ92622 972 aa14.63□□□□□ -0.07
SPTLC1-207ENST00000488921 SECISBP2LQ93073 1101 aaKnown RBP14.63□□□□□ -0.07
SPTLC1-207ENST00000488921 KCNK16Q96T55 309 aa14.63□□□□□ -0.07
SPTLC1-207ENST00000488921 HINFPQ9BQA5 517 aa14.63□□□□□ -0.07
SPTLC1-207ENST00000488921 FBXO44Q9H4M3 255 aa14.63□□□□□ -0.07
SPTLC1-207ENST00000488921 APOBEC3GQ9HC16 384 aaKnown RBP14.63□□□□□ -0.07
SPTLC1-207ENST00000488921 CSNK1G1Q9HCP0 422 aa14.63□□□□□ -0.07
SPTLC1-207ENST00000488921 FAM49BQ9NUQ9 324 aa14.63□□□□□ -0.07
SPTLC1-207ENST00000488921 HMGXB4Q9UGU5 601 aa14.63□□□□□ -0.07
SPTLC1-207ENST00000488921 CPQQ9Y646 472 aa14.63□□□□□ -0.07
SPTLC1-207ENST00000488921 WNT6Q9Y6F9 365 aa14.63□□□□□ -0.07
SPTLC1-207ENST00000488921 FAM186AA6NE01 2351 aa14.63□□□□□ -0.07
SPTLC1-207ENST00000488921 FAM92AA1XBS5 289 aa14.62□□□□□ -0.07
SPTLC1-207ENST00000488921 OTOL1A6NHN0 477 aaPredicted RBP14.62□□□□□ -0.07
SPTLC1-207ENST00000488921 TNFRSF10BO14763 440 aa14.62□□□□□ -0.07
SPTLC1-207ENST00000488921 ATG13O75143 517 aa14.62□□□□□ -0.07
SPTLC1-207ENST00000488921 CILPO75339 1184 aa14.62□□□□□ -0.07
SPTLC1-207ENST00000488921 MBL2P11226 248 aaPredicted RBP14.62□□□□□ -0.07
SPTLC1-207ENST00000488921 ORC1Q13415 861 aa14.62□□□□□ -0.07
SPTLC1-207ENST00000488921 GAS6Q14393 721 aa14.62□□□□□ -0.07
SPTLC1-207ENST00000488921 FBXO43Q4G163 708 aa14.62□□□□□ -0.07
SPTLC1-207ENST00000488921 DCAF17Q5H9S7 520 aaPredicted RBP14.62□□□□□ -0.07
SPTLC1-207ENST00000488921 WDR44Q5JSH3 913 aa14.62□□□□□ -0.07
SPTLC1-207ENST00000488921 HECTD3Q5T447 861 aa14.62□□□□□ -0.07
SPTLC1-207ENST00000488921 SNX30Q5VWJ9 437 aa14.62□□□□□ -0.07
SPTLC1-207ENST00000488921 Q6ZS52 159 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms