RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 FXR2P51116 673 aaKnown RBP eCLIP9.94□□□□□ -0.82
COL17A1-207ENST00000488320 MYL7Q01449 175 aa9.94□□□□□ -0.82
COL17A1-207ENST00000488320 GUCY1B3Q02153 619 aa9.94□□□□□ -0.82
COL17A1-207ENST00000488320 MESP2Q0VG99 397 aa9.94□□□□□ -0.82
COL17A1-207ENST00000488320 ORC2Q13416 577 aaPredicted RBP9.94□□□□□ -0.82
COL17A1-207ENST00000488320 PDIA5Q14554 519 aa9.94□□□□□ -0.82
COL17A1-207ENST00000488320 SUZ12Q15022 739 aaKnown RBP9.94□□□□□ -0.82
COL17A1-207ENST00000488320 BTBD8Q5XKL5 378 aa9.94□□□□□ -0.82
COL17A1-207ENST00000488320 RHBDF2Q6PJF5 856 aa9.94□□□□□ -0.82
COL17A1-207ENST00000488320 C12orf40Q86WS4 652 aa9.94□□□□□ -0.82
COL17A1-207ENST00000488320 NECAB1Q8N987 351 aa9.94□□□□□ -0.82
COL17A1-207ENST00000488320 LSM14AQ8ND56 463 aaKnown RBP9.94□□□□□ -0.82
COL17A1-207ENST00000488320 ZNF419Q96HQ0 510 aaPredicted RBP9.94□□□□□ -0.82
COL17A1-207ENST00000488320 MIR1-1HGQ9H1L0 117 aa9.94□□□□□ -0.82
COL17A1-207ENST00000488320 GAREM1Q9H706 876 aa9.94□□□□□ -0.82
COL17A1-207ENST00000488320 TM7SF3Q9NS93 570 aa9.94□□□□□ -0.82
COL17A1-207ENST00000488320 SMPD4Q9NXE4 827 aa9.94□□□□□ -0.82
COL17A1-207ENST00000488320 DDX43Q9NXZ2 648 aaKnown RBP9.94□□□□□ -0.82
COL17A1-207ENST00000488320 GTF3C4Q9UKN8 822 aa9.94□□□□□ -0.82
COL17A1-207ENST00000488320 DERAQ9Y315 318 aa9.94□□□□□ -0.82
COL17A1-207ENST00000488320 A0A1B0GTW7 788 aa9.93□□□□□ -0.82
COL17A1-207ENST00000488320 HUS1O60921 280 aa9.93□□□□□ -0.82
COL17A1-207ENST00000488320 CER1O95813 267 aa9.93□□□□□ -0.82
COL17A1-207ENST00000488320 HLA-EP13747 358 aa9.93□□□□□ -0.82
COL17A1-207ENST00000488320 ACAT1P24752 427 aaKnown RBP9.93□□□□□ -0.82
COL17A1-207ENST00000488320 GUCY2CP25092 1073 aa9.93□□□□□ -0.82
COL17A1-207ENST00000488320 NTSR1P30989 418 aa9.93□□□□□ -0.82
COL17A1-207ENST00000488320 MATKP42679 507 aa9.93□□□□□ -0.82
COL17A1-207ENST00000488320 ZXDBP98169 803 aa9.93□□□□□ -0.82
COL17A1-207ENST00000488320 CFHR1Q03591 330 aa9.93□□□□□ -0.82
COL17A1-207ENST00000488320 GAD2Q05329 585 aa9.93□□□□□ -0.82
COL17A1-207ENST00000488320 GNL2Q13823 731 aaKnown RBP9.93□□□□□ -0.82
COL17A1-207ENST00000488320 TTC38Q5R3I4 469 aa9.93□□□□□ -0.82
COL17A1-207ENST00000488320 C10orf76Q5T2E6 689 aa9.93□□□□□ -0.82
COL17A1-207ENST00000488320 KCNV2Q8TDN2 545 aa9.93□□□□□ -0.82
COL17A1-207ENST00000488320 LEO1Q8WVC0 666 aaPredicted RBP9.93□□□□□ -0.82
COL17A1-207ENST00000488320 ZNF560Q96MR9 790 aa9.93□□□□□ -0.82
COL17A1-207ENST00000488320 ACBD6Q9BR61 282 aa9.93□□□□□ -0.82
COL17A1-207ENST00000488320 ASB7Q9H672 318 aa9.93□□□□□ -0.82
COL17A1-207ENST00000488320 IL21RQ9HBE5 538 aa9.93□□□□□ -0.82
COL17A1-207ENST00000488320 ABCB6Q9NP58 842 aa9.93□□□□□ -0.82
COL17A1-207ENST00000488320 CFAP97Q9P2B7 532 aa9.93□□□□□ -0.82
COL17A1-207ENST00000488320 LARSQ9P2J5 1176 aaKnown RBP9.93□□□□□ -0.82
COL17A1-207ENST00000488320 DEC1Q9P2X7 70 aa9.93□□□□□ -0.82
COL17A1-207ENST00000488320 CPSF3Q9UKF6 684 aaKnown RBP9.93□□□□□ -0.82
COL17A1-207ENST00000488320 CPQQ9Y646 472 aa9.93□□□□□ -0.82
COL17A1-207ENST00000488320 CAPN8A6NHC0 703 aa9.92□□□□□ -0.82
COL17A1-207ENST00000488320 PLK4O00444 970 aa9.92□□□□□ -0.82
COL17A1-207ENST00000488320 RRP8O43159 456 aaKnown RBP9.92□□□□□ -0.82
COL17A1-207ENST00000488320 CILPO75339 1184 aa9.92□□□□□ -0.82
COL17A1-207ENST00000488320 PFKLP17858 780 aa9.92□□□□□ -0.82
COL17A1-207ENST00000488320 NDUFV2P19404 249 aa9.92□□□□□ -0.82
COL17A1-207ENST00000488320 GRIK1P39086 918 aa9.92□□□□□ -0.82
COL17A1-207ENST00000488320 ACOT2P49753 483 aa9.92□□□□□ -0.82
COL17A1-207ENST00000488320 INTS6LQ5JSJ4 861 aaKnown RBP9.92□□□□□ -0.82
COL17A1-207ENST00000488320 LY6G5CQ5SRR4 150 aa9.92□□□□□ -0.82
COL17A1-207ENST00000488320 IL27RAQ6UWB1 636 aa9.92□□□□□ -0.82
COL17A1-207ENST00000488320 KIAA1324Q6UXG2 1013 aaKnown RBP9.92□□□□□ -0.82
COL17A1-207ENST00000488320 CHPFQ8IZ52 775 aa9.92□□□□□ -0.82
COL17A1-207ENST00000488320 ZCCHC9Q8N567 271 aaKnown RBP9.92□□□□□ -0.82
COL17A1-207ENST00000488320 ENGASEQ8NFI3 743 aa9.92□□□□□ -0.82
COL17A1-207ENST00000488320 IPO4Q8TEX9 1081 aaKnown RBP9.92□□□□□ -0.82
COL17A1-207ENST00000488320 FCRL3Q96P31 734 aaPredicted RBP9.92□□□□□ -0.82
COL17A1-207ENST00000488320 ARID3AQ99856 593 aa9.92□□□□□ -0.82
COL17A1-207ENST00000488320 CCSER1Q9C0I3 900 aa9.92□□□□□ -0.82
COL17A1-207ENST00000488320 RNF38Q9H0F5 515 aa9.92□□□□□ -0.82
COL17A1-207ENST00000488320 PRORYQ9H606 182 aa9.92□□□□□ -0.82
COL17A1-207ENST00000488320 TOR4AQ9NXH8 423 aa9.92□□□□□ -0.82
COL17A1-207ENST00000488320 TBC1D14Q9P2M4 693 aa9.92□□□□□ -0.82
COL17A1-207ENST00000488320 MAGEC2Q9UBF1 373 aaPredicted RBP9.92□□□□□ -0.82
COL17A1-207ENST00000488320 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.92□□□□□ -0.82
COL17A1-207ENST00000488320 C2CD2Q9Y426 696 aa9.92□□□□□ -0.82
COL17A1-207ENST00000488320 A0A0B4J269 797 aa9.91□□□□□ -0.82
COL17A1-207ENST00000488320 NPHP3-ACAD11A0A0J9YXS1 232 aa9.91□□□□□ -0.82
COL17A1-207ENST00000488320 A0A1W2PQF6 199 aa9.91□□□□□ -0.82
COL17A1-207ENST00000488320 PP2D1A8MPX8 630 aa9.91□□□□□ -0.82
COL17A1-207ENST00000488320 E9PAM4 449 aa9.91□□□□□ -0.82
COL17A1-207ENST00000488320 FLRT2O43155 660 aa9.91□□□□□ -0.82
COL17A1-207ENST00000488320 ARHGAP6O43182 974 aa9.91□□□□□ -0.82
COL17A1-207ENST00000488320 FAM189A1O60320 539 aa9.91□□□□□ -0.82
COL17A1-207ENST00000488320 ZNF883P0CG24 379 aa9.91□□□□□ -0.82
COL17A1-207ENST00000488320 MBL2P11226 248 aaPredicted RBP9.91□□□□□ -0.82
COL17A1-207ENST00000488320 ANXA13P27216 316 aa9.91□□□□□ -0.82
COL17A1-207ENST00000488320 CDC25AP30304 524 aa9.91□□□□□ -0.82
COL17A1-207ENST00000488320 PNPLA4P41247 253 aa9.91□□□□□ -0.82
COL17A1-207ENST00000488320 NCKAP1LP55160 1127 aa9.91□□□□□ -0.82
COL17A1-207ENST00000488320 SLC7A9P82251 487 aa9.91□□□□□ -0.82
COL17A1-207ENST00000488320 SEMG2Q02383 582 aa9.91□□□□□ -0.82
COL17A1-207ENST00000488320 CAMK2BQ13554 666 aa9.91□□□□□ -0.82
COL17A1-207ENST00000488320 ANKRD1Q15327 319 aa9.91□□□□□ -0.82
COL17A1-207ENST00000488320 HLA-BQ31612 363 aa9.91□□□□□ -0.82
COL17A1-207ENST00000488320 ANO4Q32M45 955 aa9.91□□□□□ -0.82
COL17A1-207ENST00000488320 ADALQ6DHV7 355 aa9.91□□□□□ -0.82
COL17A1-207ENST00000488320 C4orf50Q6ZRC1 276 aa9.91□□□□□ -0.82
COL17A1-207ENST00000488320 KCNK18Q7Z418 384 aa9.91□□□□□ -0.82
COL17A1-207ENST00000488320 DDX42Q86XP3 938 aaKnown RBP eCLIP9.91□□□□□ -0.82
COL17A1-207ENST00000488320 PDCL2Q8N4E4 241 aa9.91□□□□□ -0.82
COL17A1-207ENST00000488320 KIAA1958Q8N8K9 716 aa9.91□□□□□ -0.82
COL17A1-207ENST00000488320 KRI1Q8N9T8 703 aaKnown RBP9.91□□□□□ -0.82
COL17A1-207ENST00000488320 EHD2Q9NZN4 543 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms