RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 IFRD2Q12894 506 aaPredicted RBP24.02■■□□□ 1.44
PTPN4-211ENST00000488279 RSPO4Q2I0M5 234 aaPredicted RBP24.02■■□□□ 1.44
PTPN4-211ENST00000488279 ZACNQ401N2 412 aa24.02■■□□□ 1.44
PTPN4-211ENST00000488279 PKN3Q6P5Z2 889 aa24.02■■□□□ 1.44
PTPN4-211ENST00000488279 SCARA5Q6ZMJ2 495 aa24.02■■□□□ 1.44
PTPN4-211ENST00000488279 DGLUCYQ7Z3D6 616 aa24.02■■□□□ 1.44
PTPN4-211ENST00000488279 WDR5BQ86VZ2 330 aa24.02■■□□□ 1.44
PTPN4-211ENST00000488279 TAF4BQ92750 862 aa24.02■■□□□ 1.44
PTPN4-211ENST00000488279 CD101Q93033 1021 aa24.02■■□□□ 1.44
PTPN4-211ENST00000488279 MED10Q9BTT4 135 aa24.02■■□□□ 1.44
PTPN4-211ENST00000488279 DLL3Q9NYJ7 618 aa24.02■■□□□ 1.44
PTPN4-211ENST00000488279 TRAF3IP3Q9Y228 551 aa24.02■■□□□ 1.44
PTPN4-211ENST00000488279 GTF3C3Q9Y5Q9 886 aa24.02■■□□□ 1.44
PTPN4-211ENST00000488279 ZNF638Q14966 1978 aaKnown RBP24.02■■□□□ 1.43
PTPN4-211ENST00000488279 A0A1W2PQ27 194 aa24.01■■□□□ 1.43
PTPN4-211ENST00000488279 A0A1W2PQ64 194 aa24.01■■□□□ 1.43
PTPN4-211ENST00000488279 A0A1W2PQD8 194 aa24.01■■□□□ 1.43
PTPN4-211ENST00000488279 RHOBTB3O94955 611 aa24.01■■□□□ 1.43
PTPN4-211ENST00000488279 NFATC1O95644 943 aa24.01■■□□□ 1.43
PTPN4-211ENST00000488279 TGM1P22735 817 aa24.01■■□□□ 1.43
PTPN4-211ENST00000488279 LMNB2Q03252 620 aa24.01■■□□□ 1.43
PTPN4-211ENST00000488279 SRSF5Q13243 272 aaKnown RBP24.01■■□□□ 1.43
PTPN4-211ENST00000488279 SV2AQ7L0J3 742 aa24.01■■□□□ 1.43
PTPN4-211ENST00000488279 KIAA1958Q8N8K9 716 aa24.01■■□□□ 1.43
PTPN4-211ENST00000488279 PDZD8Q8NEN9 1154 aa24.01■■□□□ 1.43
PTPN4-211ENST00000488279 ELMO3Q96BJ8 720 aa24.01■■□□□ 1.43
PTPN4-211ENST00000488279 KCNK16Q96T55 309 aa24.01■■□□□ 1.43
PTPN4-211ENST00000488279 OBSL1O75147 1896 aa24■■□□□ 1.43
PTPN4-211ENST00000488279 PRR5-ARHGAP8B1AHC4 643 aa24■■□□□ 1.43
PTPN4-211ENST00000488279 MAPK13O15264 365 aa24■■□□□ 1.43
PTPN4-211ENST00000488279 OLFM2O95897 454 aa24■■□□□ 1.43
PTPN4-211ENST00000488279 PRR29P0C7W0 189 aa24■■□□□ 1.43
PTPN4-211ENST00000488279 HOXC13P31276 330 aa24■■□□□ 1.43
PTPN4-211ENST00000488279 ARHGAP8P85298 464 aa24■■□□□ 1.43
PTPN4-211ENST00000488279 DPYDQ12882 1025 aa24■■□□□ 1.43
PTPN4-211ENST00000488279 NAIF1Q69YI7 327 aaPredicted RBP24■■□□□ 1.43
PTPN4-211ENST00000488279 KRBA2Q6ZNG9 492 aa24■■□□□ 1.43
PTPN4-211ENST00000488279 CEP68Q76N32 757 aa24■■□□□ 1.43
PTPN4-211ENST00000488279 SMARCD1Q96GM5 515 aa24■■□□□ 1.43
PTPN4-211ENST00000488279 SDCBP2Q9H190 292 aa24■■□□□ 1.43
PTPN4-211ENST00000488279 CPQQ9Y646 472 aa24■■□□□ 1.43
PTPN4-211ENST00000488279 KIF26AQ9ULI4 1882 aaPredicted RBP24■■□□□ 1.43
PTPN4-211ENST00000488279 CCDC163A0A0D9SF12 145 aa23.99■■□□□ 1.43
PTPN4-211ENST00000488279 OAS1P00973 400 aaKnown RBP23.99■■□□□ 1.43
PTPN4-211ENST00000488279 NR2F2P24468 414 aa23.99■■□□□ 1.43
PTPN4-211ENST00000488279 VAMP7P51809 220 aa23.99■■□□□ 1.43
PTPN4-211ENST00000488279 SPEM2Q0P670 501 aa23.99■■□□□ 1.43
PTPN4-211ENST00000488279 PAQR9Q6ZVX9 377 aa23.99■■□□□ 1.43
PTPN4-211ENST00000488279 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.99■■□□□ 1.43
PTPN4-211ENST00000488279 ACOT1Q86TX2 421 aa23.99■■□□□ 1.43
PTPN4-211ENST00000488279 FAM35AQ86V20 835 aa23.99■■□□□ 1.43
PTPN4-211ENST00000488279 CAMKK1Q8N5S9 505 aa23.99■■□□□ 1.43
PTPN4-211ENST00000488279 CCDC26Q8TAB7 109 aa23.99■■□□□ 1.43
PTPN4-211ENST00000488279 OVCA2Q8WZ82 227 aa23.99■■□□□ 1.43
PTPN4-211ENST00000488279 FBXO32Q969P5 355 aa23.99■■□□□ 1.43
PTPN4-211ENST00000488279 DMAP1Q9NPF5 467 aaPredicted RBP23.99■■□□□ 1.43
PTPN4-211ENST00000488279 SMPD4Q9NXE4 827 aa23.99■■□□□ 1.43
PTPN4-211ENST00000488279 CHORDC1Q9UHD1 332 aaPredicted RBP23.99■■□□□ 1.43
PTPN4-211ENST00000488279 MAPK8IP1Q9UQF2 711 aa23.99■■□□□ 1.43
PTPN4-211ENST00000488279 SLC9A3R1O14745 358 aaPredicted RBP23.98■■□□□ 1.43
PTPN4-211ENST00000488279 LRP3O75074 770 aa23.98■■□□□ 1.43
PTPN4-211ENST00000488279 ZNF202O95125 648 aa23.98■■□□□ 1.43
PTPN4-211ENST00000488279 ASS1P00966 412 aaKnown RBP23.98■■□□□ 1.43
PTPN4-211ENST00000488279 RPL13P26373 211 aaKnown RBP23.98■■□□□ 1.43
PTPN4-211ENST00000488279 PXNP49023 591 aaPredicted RBP23.98■■□□□ 1.43
PTPN4-211ENST00000488279 NFIL3Q16649 462 aa23.98■■□□□ 1.43
PTPN4-211ENST00000488279 INTS8Q75QN2 995 aaKnown RBP23.98■■□□□ 1.43
PTPN4-211ENST00000488279 FILIP1Q7Z7B0 1213 aa23.98■■□□□ 1.43
PTPN4-211ENST00000488279 UNC93AQ86WB7 457 aa23.98■■□□□ 1.43
PTPN4-211ENST00000488279 DDX42Q86XP3 938 aaKnown RBP eCLIP23.98■■□□□ 1.43
PTPN4-211ENST00000488279 ADGRG2Q8IZP9 1017 aa23.98■■□□□ 1.43
PTPN4-211ENST00000488279 CRYBG2Q8N1P7 616 aa23.98■■□□□ 1.43
PTPN4-211ENST00000488279 SCAMP5Q8TAC9 235 aa23.98■■□□□ 1.43
PTPN4-211ENST00000488279 PARD6AQ9NPB6 346 aa23.98■■□□□ 1.43
PTPN4-211ENST00000488279 COMMD8Q9NX08 183 aa23.98■■□□□ 1.43
PTPN4-211ENST00000488279 AP1G2O75843 785 aa23.97■■□□□ 1.43
PTPN4-211ENST00000488279 HLA-DRAP01903 254 aa23.97■■□□□ 1.43
PTPN4-211ENST00000488279 MBL2P11226 248 aaPredicted RBP23.97■■□□□ 1.43
PTPN4-211ENST00000488279 TRIM21P19474 475 aaKnown RBP23.97■■□□□ 1.43
PTPN4-211ENST00000488279 PIK3CAP42336 1068 aa23.97■■□□□ 1.43
PTPN4-211ENST00000488279 NDST1P52848 882 aa23.97■■□□□ 1.43
PTPN4-211ENST00000488279 C1orf220Q5T0J3 134 aa23.97■■□□□ 1.43
PTPN4-211ENST00000488279 FUKQ8N0W3 1084 aa23.97■■□□□ 1.43
PTPN4-211ENST00000488279 GUF1Q8N442 669 aaKnown RBP23.97■■□□□ 1.43
PTPN4-211ENST00000488279 RPLP0P6Q8NHW5 317 aa23.97■■□□□ 1.43
PTPN4-211ENST00000488279 CCDC34Q96HJ3 373 aa23.97■■□□□ 1.43
PTPN4-211ENST00000488279 IMPG2Q9BZV3 1241 aa23.97■■□□□ 1.43
PTPN4-211ENST00000488279 IL37Q9NZH6 218 aa23.97■■□□□ 1.43
PTPN4-211ENST00000488279 GREB1Q4ZG55 1949 aa23.96■■□□□ 1.43
PTPN4-211ENST00000488279 TNFRSF10BO14763 440 aa23.96■■□□□ 1.43
PTPN4-211ENST00000488279 AKAP3O75969 853 aa23.96■■□□□ 1.43
PTPN4-211ENST00000488279 KRT13P13646 458 aa23.96■■□□□ 1.43
PTPN4-211ENST00000488279 PSMC2P35998 433 aaKnown RBP23.96■■□□□ 1.43
PTPN4-211ENST00000488279 SLC5A3P53794 718 aa23.96■■□□□ 1.43
PTPN4-211ENST00000488279 HECTD3Q5T447 861 aa23.96■■□□□ 1.43
PTPN4-211ENST00000488279 SPOPLQ6IQ16 392 aa23.96■■□□□ 1.43
PTPN4-211ENST00000488279 SYT13Q7L8C5 426 aa23.96■■□□□ 1.43
PTPN4-211ENST00000488279 FAM160A2Q8N612 972 aaPredicted RBP23.96■■□□□ 1.43
PTPN4-211ENST00000488279 SLC2A14Q8TDB8 520 aa23.96■■□□□ 1.43
PTPN4-211ENST00000488279 GAB3Q8WWW8 586 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms