RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 TTC30AQ86WT1 665 aa16.61■□□□□ 0.25
C9orf3-219ENST00000488186 TMC8Q8IU68 726 aa16.61■□□□□ 0.25
C9orf3-219ENST00000488186 GJD3Q8N144 294 aa16.61■□□□□ 0.25
C9orf3-219ENST00000488186 ZMIZ2Q8NF64 920 aa16.61■□□□□ 0.25
C9orf3-219ENST00000488186 CPLX3Q8WVH0 158 aa16.61■□□□□ 0.25
C9orf3-219ENST00000488186 IQCDQ96DY2 449 aa16.61■□□□□ 0.25
C9orf3-219ENST00000488186 MCRS1Q96EZ8 462 aa16.61■□□□□ 0.25
C9orf3-219ENST00000488186 MYRFLQ96LU7 910 aa16.61■□□□□ 0.25
C9orf3-219ENST00000488186 EDEM3Q9BZQ6 932 aa16.61■□□□□ 0.25
C9orf3-219ENST00000488186 GPR88Q9GZN0 384 aa16.61■□□□□ 0.25
C9orf3-219ENST00000488186 PNPLA8Q9NP80 782 aa16.61■□□□□ 0.25
C9orf3-219ENST00000488186 ACP6Q9NPH0 428 aa16.61■□□□□ 0.25
C9orf3-219ENST00000488186 TMEM30AQ9NV96 361 aa16.61■□□□□ 0.25
C9orf3-219ENST00000488186 CDH7Q9ULB5 785 aa16.61■□□□□ 0.25
C9orf3-219ENST00000488186 ZFP37Q9Y6Q3 630 aaPredicted RBP16.61■□□□□ 0.25
C9orf3-219ENST00000488186 MYO10Q9HD67 2058 aa16.61■□□□□ 0.25
C9orf3-219ENST00000488186 MYH10P35580 1976 aa16.6■□□□□ 0.25
C9orf3-219ENST00000488186 NOTCH4Q99466 2003 aa16.6■□□□□ 0.25
C9orf3-219ENST00000488186 CYP11B1P15538 503 aa16.6■□□□□ 0.25
C9orf3-219ENST00000488186 CEBPBP17676 345 aa16.6■□□□□ 0.25
C9orf3-219ENST00000488186 PPP3CCP48454 512 aa16.6■□□□□ 0.25
C9orf3-219ENST00000488186 JAM2P57087 298 aa16.6■□□□□ 0.25
C9orf3-219ENST00000488186 USP46P62068 366 aa16.6■□□□□ 0.25
C9orf3-219ENST00000488186 TAF10Q12962 218 aa16.6■□□□□ 0.25
C9orf3-219ENST00000488186 TEAD2Q15562 447 aa16.6■□□□□ 0.25
C9orf3-219ENST00000488186 SLC5A9Q2M3M2 681 aa16.6■□□□□ 0.25
C9orf3-219ENST00000488186 PRSS36Q5K4E3 855 aa16.6■□□□□ 0.25
C9orf3-219ENST00000488186 TAF3Q5VWG9 929 aa16.6■□□□□ 0.25
C9orf3-219ENST00000488186 PIGZQ86VD9 579 aa16.6■□□□□ 0.25
C9orf3-219ENST00000488186 ZDHHC14Q8IZN3 488 aa16.6■□□□□ 0.25
C9orf3-219ENST00000488186 PDZD8Q8NEN9 1154 aa16.6■□□□□ 0.25
C9orf3-219ENST00000488186 SCAMP5Q8TAC9 235 aa16.6■□□□□ 0.25
C9orf3-219ENST00000488186 FGF13Q92913 245 aa16.6■□□□□ 0.25
C9orf3-219ENST00000488186 SECISBP2LQ93073 1101 aaKnown RBP16.6■□□□□ 0.25
C9orf3-219ENST00000488186 NOX5Q96PH1 765 aa16.6■□□□□ 0.25
C9orf3-219ENST00000488186 LRRC3Q9BY71 257 aa16.6■□□□□ 0.25
C9orf3-219ENST00000488186 ST7Q9NRC1 585 aa16.6■□□□□ 0.25
C9orf3-219ENST00000488186 GDE1Q9NZC3 331 aa16.6■□□□□ 0.25
C9orf3-219ENST00000488186 MYO6Q9UM54 1294 aa16.6■□□□□ 0.25
C9orf3-219ENST00000488186 TNFRSF10AO00220 468 aa16.59■□□□□ 0.25
C9orf3-219ENST00000488186 TNFRSF10BO14763 440 aa16.59■□□□□ 0.25
C9orf3-219ENST00000488186 FERP16591 822 aa16.59■□□□□ 0.25
C9orf3-219ENST00000488186 CCR2P41597 374 aa16.59■□□□□ 0.25
C9orf3-219ENST00000488186 RGS7P49802 495 aa16.59■□□□□ 0.25
C9orf3-219ENST00000488186 SNX16P57768 344 aa16.59■□□□□ 0.25
C9orf3-219ENST00000488186 CYP4F8P98187 520 aa16.59■□□□□ 0.25
C9orf3-219ENST00000488186 FIGNQ5HY92 759 aa16.59■□□□□ 0.25
C9orf3-219ENST00000488186 GPR158Q5T848 1215 aa16.59■□□□□ 0.25
C9orf3-219ENST00000488186 SFMBT2Q5VUG0 894 aa16.59■□□□□ 0.25
C9orf3-219ENST00000488186 DENND1BQ6P3S1 775 aa16.59■□□□□ 0.25
C9orf3-219ENST00000488186 SARM1Q6SZW1 724 aa16.59■□□□□ 0.25
C9orf3-219ENST00000488186 GAREM2Q75VX8 874 aa16.59■□□□□ 0.25
C9orf3-219ENST00000488186 GPIHBP1Q8IV16 184 aa16.59■□□□□ 0.25
C9orf3-219ENST00000488186 SIX6OS1Q8N1H7 587 aa16.59■□□□□ 0.25
C9orf3-219ENST00000488186 SHKBP1Q8TBC3 707 aa16.59■□□□□ 0.25
C9orf3-219ENST00000488186 MYADMQ96S97 322 aa16.59■□□□□ 0.25
C9orf3-219ENST00000488186 ZSWIM1Q9BR11 485 aa16.59■□□□□ 0.25
C9orf3-219ENST00000488186 TTLL2Q9BWV7 592 aa16.59■□□□□ 0.25
C9orf3-219ENST00000488186 TRPC7Q9HCX4 862 aa16.59■□□□□ 0.25
C9orf3-219ENST00000488186 CHORDC1Q9UHD1 332 aaPredicted RBP16.59■□□□□ 0.25
C9orf3-219ENST00000488186 ZMYM5Q9UJ78 669 aa16.59■□□□□ 0.25
C9orf3-219ENST00000488186 LUC7L2Q9Y383 392 aaKnown RBP16.59■□□□□ 0.25
C9orf3-219ENST00000488186 C2CD4DB7Z1M9 353 aa16.58■□□□□ 0.24
C9orf3-219ENST00000488186 F11P03951 625 aa16.58■□□□□ 0.24
C9orf3-219ENST00000488186 LAMP2P13473 410 aa16.58■□□□□ 0.24
C9orf3-219ENST00000488186 LCP1P13796 627 aa16.58■□□□□ 0.24
C9orf3-219ENST00000488186 DDX6P26196 483 aaKnown RBP eCLIP16.58■□□□□ 0.24
C9orf3-219ENST00000488186 PBX1P40424 430 aa16.58■□□□□ 0.24
C9orf3-219ENST00000488186 PLA2G4AP47712 749 aa16.58■□□□□ 0.24
C9orf3-219ENST00000488186 TKTL1P51854 596 aa16.58■□□□□ 0.24
C9orf3-219ENST00000488186 KIF11P52732 1056 aa16.58■□□□□ 0.24
C9orf3-219ENST00000488186 ASIC2Q16515 512 aa16.58■□□□□ 0.24
C9orf3-219ENST00000488186 MEA1Q16626 185 aa16.58■□□□□ 0.24
C9orf3-219ENST00000488186 SPECC1LQ69YQ0 1117 aa16.58■□□□□ 0.24
C9orf3-219ENST00000488186 ZNF677Q86XU0 584 aa16.58■□□□□ 0.24
C9orf3-219ENST00000488186 PASD1Q8IV76 773 aa16.58■□□□□ 0.24
C9orf3-219ENST00000488186 NPAS3Q8IXF0 933 aa16.58■□□□□ 0.24
C9orf3-219ENST00000488186 OVCA2Q8WZ82 227 aa16.58■□□□□ 0.24
C9orf3-219ENST00000488186 HSFY1Q96LI6 401 aa16.58■□□□□ 0.24
C9orf3-219ENST00000488186 NUCKS1Q9H1E3 243 aaKnown RBP16.58■□□□□ 0.24
C9orf3-219ENST00000488186 TASP1Q9H6P5 420 aa16.58■□□□□ 0.24
C9orf3-219ENST00000488186 IL21Q9HBE4 155 aa16.58■□□□□ 0.24
C9orf3-219ENST00000488186 TLR8Q9NR97 1041 aaKnown RBP16.58■□□□□ 0.24
C9orf3-219ENST00000488186 SEPT11Q9NVA2 429 aaKnown RBP16.58■□□□□ 0.24
C9orf3-219ENST00000488186 PCDHGC3Q9UN70 934 aa16.58■□□□□ 0.24
C9orf3-219ENST00000488186 PTPRDP23468 1912 aa16.58■□□□□ 0.24
C9orf3-219ENST00000488186 ITIH6Q6UXX5 1313 aa16.57■□□□□ 0.24
C9orf3-219ENST00000488186 A0A1W2PQJ5 194 aa16.57■□□□□ 0.24
C9orf3-219ENST00000488186 LRRC53A6NM62 1247 aa16.57■□□□□ 0.24
C9orf3-219ENST00000488186 HHLA1C9JL84 531 aa16.57■□□□□ 0.24
C9orf3-219ENST00000488186 TULP2O00295 520 aa16.57■□□□□ 0.24
C9orf3-219ENST00000488186 DLL1O00548 723 aa16.57■□□□□ 0.24
C9orf3-219ENST00000488186 DPYSL4O14531 572 aa16.57■□□□□ 0.24
C9orf3-219ENST00000488186 AVPR1AP37288 418 aa16.57■□□□□ 0.24
C9orf3-219ENST00000488186 GPD2P43304 727 aa16.57■□□□□ 0.24
C9orf3-219ENST00000488186 ACADSBP45954 432 aa16.57■□□□□ 0.24
C9orf3-219ENST00000488186 TRIM14Q14142 442 aa16.57■□□□□ 0.24
C9orf3-219ENST00000488186 TSR1Q2NL82 804 aaKnown RBP16.57■□□□□ 0.24
C9orf3-219ENST00000488186 PKDCCQ504Y2 493 aa16.57■□□□□ 0.24
C9orf3-219ENST00000488186 PMF1Q6P1K2 205 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms