RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 RABEPKQ7Z6M1 372 aa6.32□□□□□ -1.4
COL4A3-206ENST00000487633 ETFBKMTQ8IXQ9 262 aa6.32□□□□□ -1.4
COL4A3-206ENST00000487633 DAW1Q8N136 415 aa6.32□□□□□ -1.4
COL4A3-206ENST00000487633 DEPTORQ8TB45 409 aa6.32□□□□□ -1.4
COL4A3-206ENST00000487633 SNRNP27Q8WVK2 155 aaKnown RBP6.32□□□□□ -1.4
COL4A3-206ENST00000487633 MRPS31Q92665 395 aaKnown RBP6.32□□□□□ -1.4
COL4A3-206ENST00000487633 FAM20AQ96MK3 541 aa6.32□□□□□ -1.4
COL4A3-206ENST00000487633 GCNAQ96QF7 691 aa6.32□□□□□ -1.4
COL4A3-206ENST00000487633 ORAI3Q9BRQ5 295 aa6.32□□□□□ -1.4
COL4A3-206ENST00000487633 LARP6Q9BRS8 491 aaKnown RBP6.32□□□□□ -1.4
COL4A3-206ENST00000487633 CCDC94Q9BW85 323 aaPredicted RBP6.32□□□□□ -1.4
COL4A3-206ENST00000487633 MKRN2Q9H000 416 aaKnown RBP6.32□□□□□ -1.4
COL4A3-206ENST00000487633 FAM124BQ9H5Z6 455 aaPredicted RBP6.32□□□□□ -1.4
COL4A3-206ENST00000487633 SLC38A7Q9NVC3 462 aa6.32□□□□□ -1.4
COL4A3-206ENST00000487633 SMPD4Q9NXE4 827 aa6.32□□□□□ -1.4
COL4A3-206ENST00000487633 PCDHGB2Q9Y5G2 931 aa6.32□□□□□ -1.4
COL4A3-206ENST00000487633 LRBAP50851 2863 aa6.32□□□□□ -1.4
COL4A3-206ENST00000487633 TRAV19A0A0A6YYK7 116 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 METTL12A8MUP2 240 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 LACTBL1A8MY62 500 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 ENC1O14682 589 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 WNT9AO14904 365 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 KLK10O43240 276 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 DKC1O60832 514 aaKnown RBP eCLIP6.31□□□□□ -1.4
COL4A3-206ENST00000487633 NDUFS2O75306 463 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 NOL4O94818 638 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 NFATC1O95644 943 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 ITGB2P05107 769 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 USP17L7P0C7H9 530 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 GNSP15586 552 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 HDCP19113 662 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 TYMPP19971 482 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 DDX6P26196 483 aaKnown RBP eCLIP6.31□□□□□ -1.4
COL4A3-206ENST00000487633 CD6P30203 668 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 GRIK1P39086 918 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 GRIA2P42262 883 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 NAMPTP43490 491 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 TUFMP49411 452 aaKnown RBP6.31□□□□□ -1.4
COL4A3-206ENST00000487633 YARSP54577 528 aaKnown RBP6.31□□□□□ -1.4
COL4A3-206ENST00000487633 LILRA4P59901 499 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 INSM1Q01101 510 aaPredicted RBP6.31□□□□□ -1.4
COL4A3-206ENST00000487633 TLE1Q04724 770 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 VAC14Q08AM6 782 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 BYSLQ13895 437 aaKnown RBP6.31□□□□□ -1.4
COL4A3-206ENST00000487633 VEPH1Q14D04 833 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 TAF12Q16514 161 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 C10orf76Q5T2E6 689 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 WSCD1Q658N2 575 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 PADI6Q6TGC4 694 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 KDM7AQ6ZMT4 941 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 Q6ZUG5 572 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 DHX32Q7L7V1 743 aaKnown RBP6.31□□□□□ -1.4
COL4A3-206ENST00000487633 USP37Q86T82 979 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 CATSPER3Q86XQ3 398 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 BICD2Q8TD16 824 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 CCDC12Q8WUD4 166 aaPredicted RBP6.31□□□□□ -1.4
COL4A3-206ENST00000487633 ZDHHC5Q9C0B5 715 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 C2orf40Q9H1Z8 148 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 C6orf106Q9H6K1 298 aaPredicted RBP6.31□□□□□ -1.4
COL4A3-206ENST00000487633 USP36Q9P275 1121 aaKnown RBP6.31□□□□□ -1.4
COL4A3-206ENST00000487633 FTSJ1Q9UET6 329 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 SUSD2Q9UGT4 822 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 ARHGAP26Q9UNA1 814 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 ANKRD6Q9Y2G4 727 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 SPTBN1Q01082 2364 aaKnown RBP6.31□□□□□ -1.4
COL4A3-206ENST00000487633 MED13Q9UHV7 2174 aa6.31□□□□□ -1.4
COL4A3-206ENST00000487633 CRYBG3Q68DQ2 2970 aa6.3□□□□□ -1.4
COL4A3-206ENST00000487633 TTC26A0AVF1 554 aa6.3□□□□□ -1.4
COL4A3-206ENST00000487633 TBC1D3BA6NDS4 549 aa6.3□□□□□ -1.4
COL4A3-206ENST00000487633 MYMKA6NI61 221 aa6.3□□□□□ -1.4
COL4A3-206ENST00000487633 K7ENP7 123 aa6.3□□□□□ -1.4
COL4A3-206ENST00000487633 TULP3O75386 442 aa6.3□□□□□ -1.4
COL4A3-206ENST00000487633 PRPF40AO75400 957 aaKnown RBP6.3□□□□□ -1.4
COL4A3-206ENST00000487633 RFPL3O75679 317 aa6.3□□□□□ -1.4
COL4A3-206ENST00000487633 WNT1P04628 370 aa6.3□□□□□ -1.4
COL4A3-206ENST00000487633 TCF3P15923 654 aa6.3□□□□□ -1.4
COL4A3-206ENST00000487633 ACAT1P24752 427 aaKnown RBP6.3□□□□□ -1.4
COL4A3-206ENST00000487633 CTSKP43235 329 aa6.3□□□□□ -1.4
COL4A3-206ENST00000487633 GRK6P43250 576 aa6.3□□□□□ -1.4
COL4A3-206ENST00000487633 TNFRSF4P43489 277 aa6.3□□□□□ -1.4
COL4A3-206ENST00000487633 TPMTP51580 245 aa6.3□□□□□ -1.4
COL4A3-206ENST00000487633 BNIP3Q12983 259 aa6.3□□□□□ -1.4
COL4A3-206ENST00000487633 NR1H3Q13133 447 aa6.3□□□□□ -1.4
COL4A3-206ENST00000487633 FUT11Q495W5 492 aa6.3□□□□□ -1.4
COL4A3-206ENST00000487633 WDR45BQ5MNZ6 344 aa6.3□□□□□ -1.4
COL4A3-206ENST00000487633 PPP4R3AQ6IN85 833 aa6.3□□□□□ -1.4
COL4A3-206ENST00000487633 INO80CQ6PI98 192 aaPredicted RBP6.3□□□□□ -1.4
COL4A3-206ENST00000487633 PIK3AP1Q6ZUJ8 805 aa6.3□□□□□ -1.4
COL4A3-206ENST00000487633 NEK8Q86SG6 692 aa6.3□□□□□ -1.4
COL4A3-206ENST00000487633 FAM124AQ86V42 546 aa6.3□□□□□ -1.4
COL4A3-206ENST00000487633 OSTM1Q86WC4 334 aa6.3□□□□□ -1.4
COL4A3-206ENST00000487633 TMEM25Q86YD3 366 aa6.3□□□□□ -1.4
COL4A3-206ENST00000487633 EID2Q8N6I1 236 aa6.3□□□□□ -1.4
COL4A3-206ENST00000487633 TERB1Q8NA31 727 aa6.3□□□□□ -1.4
COL4A3-206ENST00000487633 ZNF248Q8NDW4 579 aa6.3□□□□□ -1.4
COL4A3-206ENST00000487633 CCDC148Q8NFR7 591 aa6.3□□□□□ -1.4
COL4A3-206ENST00000487633 EXTL1Q92935 676 aa6.3□□□□□ -1.4
COL4A3-206ENST00000487633 BRF1Q92994 677 aa6.3□□□□□ -1.4
COL4A3-206ENST00000487633 CNDP2Q96KP4 475 aaKnown RBP6.3□□□□□ -1.4
COL4A3-206ENST00000487633 MYRFLQ96LU7 910 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms