RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 AOC1P19801 751 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 CD40P25942 277 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 PTX3P26022 381 aaPredicted RBP5.18□□□□□ -1.58
CNN3-206ENST00000487539 BMPR1AP36894 532 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 SELENOPP49908 381 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 GYS2P54840 703 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 BCAR1P56945 870 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 GSTO1P78417 241 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 DMWDQ09019 674 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 ABHD18Q0P651 414 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 FOXE3Q13461 319 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 BFSP2Q13515 415 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 LRRC32Q14392 662 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 PCBP1Q15365 356 aaKnown RBP eCLIP5.18□□□□□ -1.58
CNN3-206ENST00000487539 PTGISQ16647 500 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 FAM83BQ5T0W9 1011 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 ZNF618Q5T7W0 954 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 N4BP2L1Q5TBK1 243 aaPredicted RBP5.18□□□□□ -1.58
CNN3-206ENST00000487539 PRAMEF9Q5VWM5 478 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 CREB3L3Q68CJ9 461 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 SNRNP48Q6IEG0 339 aaKnown RBP5.18□□□□□ -1.58
CNN3-206ENST00000487539 DPY19L2P1Q6NXN4 242 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 C11orf74Q86VG3 221 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 CPXCR1Q8N123 301 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 NXPE1Q8N323 547 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 MAGEB6Q8N7X4 407 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 SPATA5Q8NB90 893 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 DBF4BQ8NFT6 615 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 CHTF18Q8WVB6 975 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 VOPP1Q96AW1 172 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 YME1L1Q96TA2 773 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 OR10A2Q9H208 303 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 MFSD1Q9H3U5 465 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 RAVER2Q9HCJ3 691 aaKnown RBP5.18□□□□□ -1.58
CNN3-206ENST00000487539 KCMF1Q9P0J7 381 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 USP36Q9P275 1121 aaKnown RBP5.18□□□□□ -1.58
CNN3-206ENST00000487539 SERPINB13Q9UIV8 391 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 NR2E1Q9Y466 385 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 C5orf67F2Z3F1 127 aa5.17□□□□□ -1.58
CNN3-206ENST00000487539 TAF4O00268 1085 aa5.17□□□□□ -1.58
CNN3-206ENST00000487539 ARHGAP6O43182 974 aa5.17□□□□□ -1.58
CNN3-206ENST00000487539 WEE2P0C1S8 567 aa5.17□□□□□ -1.58
CNN3-206ENST00000487539 AKR1B1P15121 316 aa5.17□□□□□ -1.58
CNN3-206ENST00000487539 ATF7P17544 494 aaPredicted RBP5.17□□□□□ -1.58
CNN3-206ENST00000487539 IL2P60568 153 aa5.17□□□□□ -1.58
CNN3-206ENST00000487539 GABPAQ06546 454 aa5.17□□□□□ -1.58
CNN3-206ENST00000487539 NFYCQ13952 458 aa5.17□□□□□ -1.58
CNN3-206ENST00000487539 PCOLCEQ15113 449 aa5.17□□□□□ -1.58
CNN3-206ENST00000487539 SEPT7Q16181 437 aaKnown RBP5.17□□□□□ -1.58
CNN3-206ENST00000487539 DGKDQ16760 1214 aa5.17□□□□□ -1.58
CNN3-206ENST00000487539 TRIM71Q2Q1W2 868 aaKnown RBP5.17□□□□□ -1.58
CNN3-206ENST00000487539 KRTAP15-1Q3LI76 137 aa5.17□□□□□ -1.58
CNN3-206ENST00000487539 GPR158Q5T848 1215 aa5.17□□□□□ -1.58
CNN3-206ENST00000487539 AGBL4Q5VU57 503 aa5.17□□□□□ -1.58
CNN3-206ENST00000487539 SYCE2Q6PIF2 218 aa5.17□□□□□ -1.58
CNN3-206ENST00000487539 USP30Q70CQ3 517 aa5.17□□□□□ -1.58
CNN3-206ENST00000487539 MAML2Q8IZL2 1156 aaPredicted RBP5.17□□□□□ -1.58
CNN3-206ENST00000487539 MIGA1Q8NAN2 632 aa5.17□□□□□ -1.58
CNN3-206ENST00000487539 SPPL3Q8TCT6 385 aa5.17□□□□□ -1.58
CNN3-206ENST00000487539 AFAP1L1Q8TED9 768 aa5.17□□□□□ -1.58
CNN3-206ENST00000487539 LEO1Q8WVC0 666 aaPredicted RBP5.17□□□□□ -1.58
CNN3-206ENST00000487539 LPPQ93052 612 aa5.17□□□□□ -1.58
CNN3-206ENST00000487539 TOP1MTQ969P6 601 aa5.17□□□□□ -1.58
CNN3-206ENST00000487539 ZG16BQ96DA0 208 aa5.17□□□□□ -1.58
CNN3-206ENST00000487539 NEIL1Q96FI4 390 aaPredicted RBP5.17□□□□□ -1.58
CNN3-206ENST00000487539 RTKNQ9BST9 563 aa5.17□□□□□ -1.58
CNN3-206ENST00000487539 MTG1Q9BT17 334 aaPredicted RBP5.17□□□□□ -1.58
CNN3-206ENST00000487539 SEZ6LQ9BYH1 1024 aa5.17□□□□□ -1.58
CNN3-206ENST00000487539 TRIM8Q9BZR9 551 aa5.17□□□□□ -1.58
CNN3-206ENST00000487539 MEGF9Q9H1U4 602 aa5.17□□□□□ -1.58
CNN3-206ENST00000487539 TMX1Q9H3N1 280 aa5.17□□□□□ -1.58
CNN3-206ENST00000487539 SEMA4AQ9H3S1 761 aa5.17□□□□□ -1.58
CNN3-206ENST00000487539 VCPKMTQ9H867 229 aa5.17□□□□□ -1.58
CNN3-206ENST00000487539 ERVK-5Q9HDB9 667 aa5.17□□□□□ -1.58
CNN3-206ENST00000487539 SAE1Q9UBE0 346 aaPredicted RBP5.17□□□□□ -1.58
CNN3-206ENST00000487539 ANGPTL2Q9UKU9 493 aa5.17□□□□□ -1.58
CNN3-206ENST00000487539 SORCS3Q9UPU3 1222 aa5.17□□□□□ -1.58
CNN3-206ENST00000487539 TMX2Q9Y320 296 aa5.17□□□□□ -1.58
CNN3-206ENST00000487539 TESMINQ9Y4I5 508 aa5.17□□□□□ -1.58
CNN3-206ENST00000487539 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.17□□□□□ -1.58
CNN3-206ENST00000487539 PDS5AQ29RF7 1337 aaKnown RBP5.17□□□□□ -1.58
CNN3-206ENST00000487539 A0A087X0B3 334 aa5.16□□□□□ -1.58
CNN3-206ENST00000487539 SRRM3A6NNA2 597 aaPredicted RBP5.16□□□□□ -1.58
CNN3-206ENST00000487539 H2AFYO75367 372 aaKnown RBP5.16□□□□□ -1.58
CNN3-206ENST00000487539 MMP1P03956 469 aa5.16□□□□□ -1.58
CNN3-206ENST00000487539 ITGB1P05556 798 aa5.16□□□□□ -1.58
CNN3-206ENST00000487539 IL12RB1P42701 662 aa5.16□□□□□ -1.58
CNN3-206ENST00000487539 LSSP48449 732 aa5.16□□□□□ -1.58
CNN3-206ENST00000487539 PHC1P78364 1004 aa5.16□□□□□ -1.58
CNN3-206ENST00000487539 TFCP2Q12800 502 aa5.16□□□□□ -1.58
CNN3-206ENST00000487539 CCDC6Q16204 474 aa5.16□□□□□ -1.58
CNN3-206ENST00000487539 IQSEC1Q6DN90 963 aa5.16□□□□□ -1.58
CNN3-206ENST00000487539 NAA16Q6N069 864 aaPredicted RBP5.16□□□□□ -1.58
CNN3-206ENST00000487539 ESRP1Q6NXG1 681 aaKnown RBP5.16□□□□□ -1.58
CNN3-206ENST00000487539 NFRKBQ6P4R8 1299 aa5.16□□□□□ -1.58
CNN3-206ENST00000487539 KLHDC10Q6PID8 442 aa5.16□□□□□ -1.58
CNN3-206ENST00000487539 LARP4Q71RC2 724 aaKnown RBP eCLIP5.16□□□□□ -1.58
CNN3-206ENST00000487539 FILIP1Q7Z7B0 1213 aa5.16□□□□□ -1.58
CNN3-206ENST00000487539 UBALD2Q8IYN6 164 aa5.16□□□□□ -1.58
CNN3-206ENST00000487539 ANKRD35Q8N283 1001 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms