RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 USP13Q92995 863 aaPredicted RBP19.25■□□□□ 0.67
COL1A1-207ENST00000486572 JAKMIP2Q96AA8 810 aa19.25■□□□□ 0.67
COL1A1-207ENST00000486572 DUSP16Q9BY84 665 aa19.25■□□□□ 0.67
COL1A1-207ENST00000486572 NDST4Q9H3R1 872 aa19.25■□□□□ 0.67
COL1A1-207ENST00000486572 FBXO44Q9H4M3 255 aa19.25■□□□□ 0.67
COL1A1-207ENST00000486572 TDP1Q9NUW8 608 aa19.25■□□□□ 0.67
COL1A1-207ENST00000486572 PCDHB4Q9Y5E5 795 aa19.25■□□□□ 0.67
COL1A1-207ENST00000486572 ZNF638Q14966 1978 aaKnown RBP19.24■□□□□ 0.67
COL1A1-207ENST00000486572 FAM92AA1XBS5 289 aa19.24■□□□□ 0.67
COL1A1-207ENST00000486572 HHLA1C9JL84 531 aa19.24■□□□□ 0.67
COL1A1-207ENST00000486572 PAEPP09466 180 aa19.24■□□□□ 0.67
COL1A1-207ENST00000486572 CD19P15391 556 aa19.24■□□□□ 0.67
COL1A1-207ENST00000486572 TYRO3Q06418 890 aa19.24■□□□□ 0.67
COL1A1-207ENST00000486572 ZNF268Q14587 947 aaPredicted RBP19.24■□□□□ 0.67
COL1A1-207ENST00000486572 EXOC3L4Q17RC7 722 aa19.24■□□□□ 0.67
COL1A1-207ENST00000486572 VWA3BQ502W6 1294 aa19.24■□□□□ 0.67
COL1A1-207ENST00000486572 TCP11X2Q5H9J9 407 aa19.24■□□□□ 0.67
COL1A1-207ENST00000486572 MIIPQ5JXC2 388 aa19.24■□□□□ 0.67
COL1A1-207ENST00000486572 ARL14EPQ8N8R7 260 aaPredicted RBP19.24■□□□□ 0.67
COL1A1-207ENST00000486572 FLCNQ8NFG4 579 aa19.24■□□□□ 0.67
COL1A1-207ENST00000486572 KREMEN1Q96MU8 473 aa19.24■□□□□ 0.67
COL1A1-207ENST00000486572 LRRC3BQ96PB8 259 aa19.24■□□□□ 0.67
COL1A1-207ENST00000486572 SLC22A12Q96S37 553 aa19.24■□□□□ 0.67
COL1A1-207ENST00000486572 TRPV5Q9NQA5 729 aa19.24■□□□□ 0.67
COL1A1-207ENST00000486572 KIAA1257Q9ULG3 409 aa19.24■□□□□ 0.67
COL1A1-207ENST00000486572 CCL26Q9Y258 94 aa19.24■□□□□ 0.67
COL1A1-207ENST00000486572 ANAPC1Q9H1A4 1944 aa19.23■□□□□ 0.67
COL1A1-207ENST00000486572 CHADO15335 359 aa19.23■□□□□ 0.67
COL1A1-207ENST00000486572 ABL1P00519 1130 aa19.23■□□□□ 0.67
COL1A1-207ENST00000486572 VDRP11473 427 aa19.23■□□□□ 0.67
COL1A1-207ENST00000486572 HDCP19113 662 aa19.23■□□□□ 0.67
COL1A1-207ENST00000486572 SLC9A1P19634 815 aa19.23■□□□□ 0.67
COL1A1-207ENST00000486572 PTMSP20962 102 aa19.23■□□□□ 0.67
COL1A1-207ENST00000486572 RFX1P22670 979 aa19.23■□□□□ 0.67
COL1A1-207ENST00000486572 SLC8A3P57103 927 aa19.23■□□□□ 0.67
COL1A1-207ENST00000486572 MYL5Q02045 173 aa19.23■□□□□ 0.67
COL1A1-207ENST00000486572 MLF2Q15773 248 aaPredicted RBP19.23■□□□□ 0.67
COL1A1-207ENST00000486572 GOLGA7BQ2TAP0 167 aa19.23■□□□□ 0.67
COL1A1-207ENST00000486572 KLHL40Q2TBA0 621 aa19.23■□□□□ 0.67
COL1A1-207ENST00000486572 ARHGAP29Q52LW3 1261 aa19.23■□□□□ 0.67
COL1A1-207ENST00000486572 SLC44A4Q53GD3 710 aa19.23■□□□□ 0.67
COL1A1-207ENST00000486572 IER5LQ5T953 404 aa19.23■□□□□ 0.67
COL1A1-207ENST00000486572 CDKAL1Q5VV42 579 aa19.23■□□□□ 0.67
COL1A1-207ENST00000486572 CWF19L1Q69YN2 538 aaKnown RBP19.23■□□□□ 0.67
COL1A1-207ENST00000486572 ENOSF1Q7L5Y1 443 aa19.23■□□□□ 0.67
COL1A1-207ENST00000486572 GPRIN1Q7Z2K8 1008 aa19.23■□□□□ 0.67
COL1A1-207ENST00000486572 ANKRD52Q8NB46 1076 aa19.23■□□□□ 0.67
COL1A1-207ENST00000486572 RBBP8NLQ8NC74 664 aaPredicted RBP19.23■□□□□ 0.67
COL1A1-207ENST00000486572 SHDQ96IW2 340 aa19.23■□□□□ 0.67
COL1A1-207ENST00000486572 FAM81BQ96LP2 452 aa19.23■□□□□ 0.67
COL1A1-207ENST00000486572 CYP2S1Q96SQ9 504 aa19.23■□□□□ 0.67
COL1A1-207ENST00000486572 TBC1D17Q9HA65 648 aa19.23■□□□□ 0.67
COL1A1-207ENST00000486572 UBE2TQ9NPD8 197 aaPredicted RBP19.23■□□□□ 0.67
COL1A1-207ENST00000486572 APEX2Q9UBZ4 518 aa19.23■□□□□ 0.67
COL1A1-207ENST00000486572 TSPAN16Q9UKR8 245 aa19.23■□□□□ 0.67
COL1A1-207ENST00000486572 MYH10P35580 1976 aa19.23■□□□□ 0.67
COL1A1-207ENST00000486572 COL4A2P08572 1712 aa19.22■□□□□ 0.67
COL1A1-207ENST00000486572 ARNTLO00327 626 aa19.22■□□□□ 0.67
COL1A1-207ENST00000486572 OLFM2O95897 454 aa19.22■□□□□ 0.67
COL1A1-207ENST00000486572 OAS1P00973 400 aaKnown RBP19.22■□□□□ 0.67
COL1A1-207ENST00000486572 PON1P27169 355 aa19.22■□□□□ 0.67
COL1A1-207ENST00000486572 BCAT1P54687 386 aa19.22■□□□□ 0.67
COL1A1-207ENST00000486572 MFAP3P55082 362 aa19.22■□□□□ 0.67
COL1A1-207ENST00000486572 PLCB2Q00722 1185 aa19.22■□□□□ 0.67
COL1A1-207ENST00000486572 PRKCQQ04759 706 aa19.22■□□□□ 0.67
COL1A1-207ENST00000486572 ASTLQ6HA08 431 aaPredicted RBP19.22■□□□□ 0.67
COL1A1-207ENST00000486572 HEBP1Q9NRV9 189 aa19.22■□□□□ 0.67
COL1A1-207ENST00000486572 THG1LQ9NWX6 298 aaKnown RBP19.22■□□□□ 0.67
COL1A1-207ENST00000486572 GMIPQ9P107 970 aa19.22■□□□□ 0.67
COL1A1-207ENST00000486572 HESX1Q9UBX0 185 aa19.22■□□□□ 0.67
COL1A1-207ENST00000486572 ARHGAP26Q9UNA1 814 aa19.22■□□□□ 0.67
COL1A1-207ENST00000486572 KIF26AQ9ULI4 1882 aaPredicted RBP19.22■□□□□ 0.67
COL1A1-207ENST00000486572 ZDBF2Q9HCK1 2354 aa19.21■□□□□ 0.67
COL1A1-207ENST00000486572 O00370 1275 aa19.21■□□□□ 0.67
COL1A1-207ENST00000486572 PES1O00541 588 aaKnown RBP19.21■□□□□ 0.67
COL1A1-207ENST00000486572 ZDHHC11BP0C7U3 371 aa19.21■□□□□ 0.67
COL1A1-207ENST00000486572 TUBP50607 506 aa19.21■□□□□ 0.67
COL1A1-207ENST00000486572 CLCN5P51795 746 aa19.21■□□□□ 0.67
COL1A1-207ENST00000486572 ZNF132P52740 706 aa19.21■□□□□ 0.67
COL1A1-207ENST00000486572 VCPP55072 806 aaKnown RBP19.21■□□□□ 0.67
COL1A1-207ENST00000486572 STARD6P59095 220 aa19.21■□□□□ 0.67
COL1A1-207ENST00000486572 SNX30Q5VWJ9 437 aa19.21■□□□□ 0.67
COL1A1-207ENST00000486572 GJB7Q6PEY0 223 aa19.21■□□□□ 0.67
COL1A1-207ENST00000486572 TTC30AQ86WT1 665 aa19.21■□□□□ 0.67
COL1A1-207ENST00000486572 KMT2EQ8IZD2 1858 aa19.21■□□□□ 0.67
COL1A1-207ENST00000486572 UBXN6Q9BZV1 441 aa19.21■□□□□ 0.67
COL1A1-207ENST00000486572 FANCLQ9NW38 375 aa19.21■□□□□ 0.67
COL1A1-207ENST00000486572 CHORDC1Q9UHD1 332 aaPredicted RBP19.21■□□□□ 0.67
COL1A1-207ENST00000486572 CNTN6Q9UQ52 1028 aa19.21■□□□□ 0.67
COL1A1-207ENST00000486572 SCML2Q9UQR0 700 aa19.21■□□□□ 0.67
COL1A1-207ENST00000486572 HCN4Q9Y3Q4 1203 aa19.21■□□□□ 0.67
COL1A1-207ENST00000486572 MYO16Q9Y6X6 1858 aa19.2■□□□□ 0.66
COL1A1-207ENST00000486572 HELZP42694 1942 aaKnown RBP19.2■□□□□ 0.66
COL1A1-207ENST00000486572 TICRRQ7Z2Z1 1910 aa19.2■□□□□ 0.66
COL1A1-207ENST00000486572 RNF225M0QZC1 329 aaPredicted RBP19.2■□□□□ 0.66
COL1A1-207ENST00000486572 STK25O00506 426 aa19.2■□□□□ 0.66
COL1A1-207ENST00000486572 KRT5P13647 590 aa19.2■□□□□ 0.66
COL1A1-207ENST00000486572 AOC1P19801 751 aa19.2■□□□□ 0.66
COL1A1-207ENST00000486572 COL9A1P20849 921 aa19.2■□□□□ 0.66
COL1A1-207ENST00000486572 AVPR2P30518 371 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms