RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 GALNTL6Q49A17 601 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 PTRHD1Q6GMV3 140 aaKnown RBP9.07□□□□□ -0.96
GABRE-209ENST00000486255 SLC25A24Q6NUK1 477 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 CDC73Q6P1J9 531 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 TRIM65Q6PJ69 517 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 EPS8L3Q8TE67 593 aaKnown RBP9.07□□□□□ -0.96
GABRE-209ENST00000486255 CHID1Q9BWS9 393 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 PRRG3Q9BZD7 231 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 SPASTQ9UBP0 616 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 TJP2Q9UDY2 1190 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 VAV3Q9UKW4 847 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 PCP4L1A6NKN8 68 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 RAD51BO15315 384 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 NME5P56597 212 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 EPS8Q12929 822 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 ORC2Q13416 577 aaPredicted RBP9.07□□□□□ -0.96
GABRE-209ENST00000486255 TBCELQ5QJ74 424 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 MFSD4BQ5TF39 518 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 PCNX4Q63HM2 1172 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 REXO1L1PQ8IX06 675 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 C1orf131Q8NDD1 294 aaKnown RBP9.07□□□□□ -0.96
GABRE-209ENST00000486255 OXER1Q8TDS5 423 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 MTA3Q9BTC8 594 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 ZNF302Q9NR11 478 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 RPS6KB2Q9UBS0 482 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 MYRFQ9Y2G1 1151 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 NEDD4P46934 1319 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 SPATA31A5Q5VU36 1347 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 SPATA31A7Q8IWB4 1347 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 LSM1O15116 133 aaKnown RBP9.07□□□□□ -0.96
GABRE-209ENST00000486255 FCER1AP12319 257 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 WARSP23381 471 aaKnown RBP9.07□□□□□ -0.96
GABRE-209ENST00000486255 CDK8P49336 464 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 ANXA11P50995 505 aaKnown RBP9.07□□□□□ -0.96
GABRE-209ENST00000486255 AKR1D1P51857 326 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 SLC34A1Q06495 639 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 NAB2Q15742 525 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 HIST2H2ACQ16777 129 aaPredicted RBP9.07□□□□□ -0.96
GABRE-209ENST00000486255 HIST2H2AA3Q6FI13 130 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 TMED8Q6PL24 325 aaPredicted RBP9.07□□□□□ -0.96
GABRE-209ENST00000486255 C4orf22Q6V702 233 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 VPS33AQ96AX1 596 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 ERP44Q9BS26 406 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 IRX2Q9BZI1 471 aaPredicted RBP9.07□□□□□ -0.96
GABRE-209ENST00000486255 ROGDIQ9GZN7 287 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 EURLQ9NYK6 297 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 RBAKQ9NYW8 714 aaPredicted RBP9.07□□□□□ -0.96
GABRE-209ENST00000486255 SLC39A10Q9ULF5 831 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 A0A1B0GTH6 734 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 SOAT2O75908 522 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 ZNF682O95780 498 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 KCNMA1Q12791 1236 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 RASA2Q15283 850 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 PPP1R18Q6NYC8 613 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 MTDHQ86UE4 582 aaKnown RBP9.07□□□□□ -0.96
GABRE-209ENST00000486255 HNRNPLLQ8WVV9 542 aaKnown RBP9.07□□□□□ -0.96
GABRE-209ENST00000486255 FAM118BQ9BPY3 351 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 STK33Q9BYT3 514 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 ENTPD7Q9NQZ7 604 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 LEMD3Q9Y2U8 911 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 SH3GLB1Q9Y371 365 aa9.07□□□□□ -0.96
GABRE-209ENST00000486255 ATP4AP20648 1035 aa9.06□□□□□ -0.96
GABRE-209ENST00000486255 RFC5P40937 340 aa9.06□□□□□ -0.96
GABRE-209ENST00000486255 MAPKAPK2P49137 400 aa9.06□□□□□ -0.96
GABRE-209ENST00000486255 GALCP54803 685 aa9.06□□□□□ -0.96
GABRE-209ENST00000486255 RGS21Q2M5E4 152 aa9.06□□□□□ -0.96
GABRE-209ENST00000486255 ZNF544Q6NX49 715 aa9.06□□□□□ -0.96
GABRE-209ENST00000486255 ZNF333Q96JL9 665 aa9.06□□□□□ -0.96
GABRE-209ENST00000486255 TMEM260Q9NX78 707 aa9.06□□□□□ -0.96
GABRE-209ENST00000486255 ZNF222Q9UK12 451 aa9.06□□□□□ -0.96
GABRE-209ENST00000486255 RNF112Q9ULX5 631 aa9.06□□□□□ -0.96
GABRE-209ENST00000486255 COL15A1P39059 1388 aa9.06□□□□□ -0.96
GABRE-209ENST00000486255 IREB2P48200 963 aaKnown RBP9.06□□□□□ -0.96
GABRE-209ENST00000486255 PDIA6Q15084 440 aa9.06□□□□□ -0.96
GABRE-209ENST00000486255 MTFR1Q15390 333 aa9.06□□□□□ -0.96
GABRE-209ENST00000486255 TXNRD1Q16881 649 aa9.06□□□□□ -0.96
GABRE-209ENST00000486255 LRRC74BQ6ZQY2 392 aa9.06□□□□□ -0.96
GABRE-209ENST00000486255 TTLL6Q8N841 843 aa9.06□□□□□ -0.96
GABRE-209ENST00000486255 DNAJC7Q99615 494 aa9.06□□□□□ -0.96
GABRE-209ENST00000486255 GOLPH3Q9H4A6 298 aa9.06□□□□□ -0.96
GABRE-209ENST00000486255 KLHL1Q9NR64 748 aa9.06□□□□□ -0.96
GABRE-209ENST00000486255 SLC30A1Q9Y6M5 507 aa9.06□□□□□ -0.96
GABRE-209ENST00000486255 SRGNP10124 158 aa9.06□□□□□ -0.96
GABRE-209ENST00000486255 MAPK1P28482 360 aa9.06□□□□□ -0.96
GABRE-209ENST00000486255 STAT3P40763 770 aa9.06□□□□□ -0.96
GABRE-209ENST00000486255 ITGA1P56199 1179 aa9.06□□□□□ -0.96
GABRE-209ENST00000486255 CACNB2Q08289 660 aaPredicted RBP9.06□□□□□ -0.96
GABRE-209ENST00000486255 SFSWAPQ12872 951 aaKnown RBP9.06□□□□□ -0.96
GABRE-209ENST00000486255 CDC16Q13042 620 aa9.06□□□□□ -0.96
GABRE-209ENST00000486255 SPANXN2Q5MJ10 180 aa9.06□□□□□ -0.96
GABRE-209ENST00000486255 RC3H1Q5TC82 1133 aaKnown RBP9.06□□□□□ -0.96
GABRE-209ENST00000486255 UGT3A1Q6NUS8 523 aa9.06□□□□□ -0.96
GABRE-209ENST00000486255 GUF1Q8N442 669 aaKnown RBP9.06□□□□□ -0.96
GABRE-209ENST00000486255 ATG16L2Q8NAA4 619 aa9.06□□□□□ -0.96
GABRE-209ENST00000486255 TDRD5Q8NAT2 981 aaKnown RBP9.06□□□□□ -0.96
GABRE-209ENST00000486255 LATS2Q9NRM7 1088 aa9.06□□□□□ -0.96
GABRE-209ENST00000486255 RGS18Q9NS28 235 aa9.06□□□□□ -0.96
GABRE-209ENST00000486255 NPHP3-ACAD11A0A0J9YXS1 232 aa9.06□□□□□ -0.96
GABRE-209ENST00000486255 CCDC182A6NF36 153 aa9.06□□□□□ -0.96
GABRE-209ENST00000486255 CDC40O60508 579 aaKnown RBP eCLIP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms